Csor.00g273610 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g273610
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	remorin
Location	Csor_Chr06: 8052148 .. 8055182 (-)
RNA-Seq Expression	Csor.00g273610
Synteny	Csor.00g273610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAGTAATCTCTCTTTCTTCCTCTATGTTATCTGTTCGTTGTTGTGCTTTGATTGTTGCTTGTGATTGCGATGATATCGATTTGTTCATTTCTGTCTCATTTCTTACCTTGATTTATCTCGATATGAAGTGTTGGAGTGCTTGAATTATAGGCTTAGGCGAATTGTTGTGTGCTTTTTTCTTCATAGAGCGCGTACTGTGCATAGATTAGGAATTCAGGCCTTCGTCTTGTTATACTTTCACACTCTGTTTGATCGTCGAGAAATGGATCTAGTCAAAGAATAGAATCTGTACAAATTTGATTGGGAGTGATACCGATGCGTGGAAATTTGTTAGATCCAATTGAAATGATGAACTCCATATCACGATAATGAACTCTTTCTGATGTTAGTATTGCATTGTTGGAGAAAGTCAAATGTAAATCCATCGCCTTCATATCTGTCGAAGTTCTTTTAATTCTATTCGTATGGGAGAATATTTTCCTCTTCATTAACATGCGGAACGTTTCACTCTTCTTTTTCAAAGTTCAACAATGACGCGAAAACATCAATGTTTAGGGTTGCATTTGGTATTTATCCAATAAGTTAGGTTTGGATTGAATCGATATTTTTATCTTTCTTTTGTAGTTTAGTACCATTTTGGTCTTTTATTTCCTAAGTACTTCCTAATTCCCAATCCCTGCATAATACTATTCACGGAAAGTCTCGTTTCACTCTTTTCCCGGATTTCCAGAGATGAAGAGAAATAAGTTTTTGTGCCTCTTGAATAATTTTTCCTCTCTTTGTTTTGTTATCAGTGACATATGCTGTACTGGGCCCATAGGCGTTTCTGATACTCTTTGGTTTTAGCTGCCACTTAATTTATTCTTCAATATGCTTAAAGGGACAAATTGAAGATTATGCTTTAGCTTTTTATTAATTGTTTCCTTTATAGGTGTAAAGGAAGACATTGTTAAAAAAAAAGCTACAAATTGACATTATAGCTTTCTCTAATATGATTGTTTAGTAATTAGCAGTTGGGTAAGGTAGAATCAAGGAATTCGTCTTTATCGATACTTTTGAAGATGCTAATGCTAAATAATGCATCACAGCTGTCTAGCGTCGTCTTGAAGAATGATCTGTGTCCTTTCTGTCATTTGATTCTTCTTACTCAATAAAATTGGCCAAGAATTTTAATTAAACTTGTTTAAGTTGCATCTTAACGACATACTACCTTATGGTTTTAACTTGCCATCTGTTTACTTTCCTTGGTAACTATTGATGGGGTGACAGGGTTCAGGCAATCGGTCTAACTCTTACCATGGATGGAGTTAGACATCTTGGCTGTGATTTGAAAATCATCACTCAGTTTGCTTTATACTGCGTATACTTCAATTTATTTTCATCCAAATTTCTTGCTAAAGTTACTATAGCATTGCTTTTGTCCCACCTTGATAACTTTTGTTTCCATCTTTTATTATAGCTTGTTTGATTTTCCTTCTAGTTTAATGGCTTTGTACTGTATTATACAGTTACCTTTGTTTATTGCATTAATTAGCCTGAAAACTCTATCTATGGGTGCTTTTACAATTGCTTTACTGTTGGATCTTGGCAGAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGGTGAGCGTACAGCACGCATCTTATCCCATCTAAGTCTTCTAGTTTTACAACAATAAAATATTTTAAAACCTTTGTGCTGAAATCACAAGATTGTCCTGAAGAATGCTATATTTGCTGTGGTAACAAGTTGATCGTTCACAAACTGACCTGATCCTCGATTGTCTTAGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGTAAGGCTTTGATTGAACTCATCCTATTTACTTATTAGATACAGGGGAACGAGCTGGATTCTGATTCCCAACATTCATTGCTGTAATTTCCAAACTTAAAATTCAACTTTTAGCTGTATCACATCAGTATTCATGTCATGATAAGAACTTATGAACTGAAATATTTGTCTGACTATTTAATAGGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGTAACTATTAATTCCTGTTCCTATTCTCGGGTTTAACAATAATTTCCAATTGGATATTTTACTTAGGAGGTGAGCTCTTTGTCGAAAACACTCTGCACTTTTTATTAACAACAATCGATAAGAGATTACAAGTGGAAAACACTCGACACTTTTTATTAACACCCATCGAGAAGAGATTAGAACACTATAAACAAAATTATTGCACTTTATACTTTGTATTTCTTTTGGATGAAAACCTAGTTAGGGTGGAGAATATTTACAATAGAATCTATCCCTAAAATATCTCGATCTTTGGGTGGAGGGTATTTATCTATTCCTAAGATATCTTAATATTTTTCATAAAATATCTGGATTTTTTTCTTAAAATATGTAGGTAGCTTCATTCTTAAAATACCTCAATCATTCATTTTTTTCTAAAATGAATATATGAATATGGGTTCATACAATTAGAGTATAAATGGCAACGACAATTAGAGTAAAAAGAATGGGAAATTTTCTGGATTTAATTTGAGAAAGAAAAGTGGATAAGGAGAAGTGTGGAATTGTAGTATAACAAGGTTGAGAATAACAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAA

mRNA sequence

ATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAA

Coding sequence (CDS)

ATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAA

Protein sequence

MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF

Homology

[Close]

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-46
Identity = 112/172 (65.12%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 11  SPASVPPPASVE-DKEKALVPVPVSNKTK-------EDSVPKKASGGSIDRDIALAEVEK 70
           +PA  P PA VE   EK   P PV +K         E+  PKKAS GS DRD+ LA++EK
Sbjct: 19  APAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEK 78

Query: 71  EKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGE 130
           EK+ SFIKAWE+SEKSKAEN+AQKK+S V AWENSKKA +EA+L+KIEE+LEKKKA+YGE
Sbjct: 79  EKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGE 138

Query: 131 KMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           KMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Sbjct: 139 KMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-45
Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 2   VAAPENSDSSPASVPPPASVEDK---EKALVPVPVSNKTKEDSVPKKASGGSIDRDIALA 61
           V A E +  +PA +PPPA  ++K    KALV V    +TK      +   GSIDRD  LA
Sbjct: 28  VVADEKAIVAPA-LPPPAEEKEKPDDSKALVVV----ETKAPEPADEKKEGSIDRDAVLA 87

Query: 62  EVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKA 121
            V  EKR S IKAWE+SEKSKAENKAQKK+SA+ AWENSKKANLEA+LKK+EEQLEKKKA
Sbjct: 88  RVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKA 147

Query: 122 EYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EY EKMKNK+A++HKEAEEK+A +EA+R E+LLKAEE AAK+RATGT PKK LG F
Sbjct: 148 EYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-45
Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 16  PPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDS 75
           PPP  + D  KAL    V  K  E+  P K +  S+DRD+ LA++ KEKR SF++AWE+S
Sbjct: 57  PPPEQIFDDSKALT---VVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEES 116

Query: 76  EKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEA 135
           EKSKAENKA+KK++ V AWENSKKA +EA+LKKIEEQLEKKKAEY E+MKNKVA IHKEA
Sbjct: 117 EKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEA 176

Query: 136 EEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Sbjct: 177 EERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 104/175 (59.43%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 2   VAAPENSDSSPASVPPPASVEDKE---KALVPVPVSNKTKEDSVPKKASGGSIDRDIALA 61
           VA  E   + P  +P PA  E+K+   KA+VPV V  + +E+        GS++RD  LA
Sbjct: 33  VAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV-VPKEVEEEK-----KEGSVNRDAVLA 92

Query: 62  EVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKA 121
            VE EKR S IKAWE++EK K ENKA+KKLS++ +WEN+KKA +EA+LKK+EEQLEKKKA
Sbjct: 93  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 152

Query: 122 EYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGC 174
           EY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKK  GC
Sbjct: 153 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot
Match: Q93YN8 (Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08
Identity = 47/146 (32.19%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 27  ALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSF---IKAWEDSEKSKAENK 86
           A+VP   +N+   ++    AS G  +R +  A V++ KR      I AW+ ++ +K  N+
Sbjct: 144 AIVPDDYNNRDGSENNIVLASSGGQNRMVTTASVQRVKREEVEAKITAWQTAKVAKINNR 203

Query: 87  AQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEAEEKKATVE 146
            +++ + ++ W N +     + +KKIE +LE ++A+  EK +NKVA   ++AEE++AT E
Sbjct: 204 FKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKAEERRATAE 263

Query: 147 AQRSEELLKAEETAAKFRATGTIPKK 170
            +R  E+ +  E A   RA G  P K
Sbjct: 264 GKRGTEVARVLEVANLMRAVGRPPAK 289

[Close]

BLAST of Csor.00g273610 vs. NCBI nr
Match: XP_023538640.1 (remorin [Cucurbita pepo subsp. pepo] >KAG6597119.1 hypothetical protein SDJN03_10299, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028583.1 hypothetical protein SDJN02_09764 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310 bits (795), Expect = 6.02e-106
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60
           MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV
Sbjct: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60

Query: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120
           EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY
Sbjct: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120

Query: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174
           GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Sbjct: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174

[Close]

BLAST of Csor.00g273610 vs. NCBI nr
Match: XP_022933402.1 (remorin [Cucurbita moschata])

HSP 1 Score: 309 bits (792), Expect = 1.72e-105
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60
           MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV
Sbjct: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60

Query: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120
           EKEKRFSFIKAWEDSEKSKAENK+QKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY
Sbjct: 61  EKEKRFSFIKAWEDSEKSKAENKSQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120

Query: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174
           GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Sbjct: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174

[Close]

BLAST of Csor.00g273610 vs. NCBI nr
Match: XP_022974600.1 (remorin [Cucurbita maxima] >XP_022974657.1 remorin-like [Cucurbita maxima])

HSP 1 Score: 308 bits (789), Expect = 4.94e-105
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60
           MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV
Sbjct: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60

Query: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120
           EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY
Sbjct: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120

Query: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174
           GEKMKNKVAIIHKEAEEKKA VEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Sbjct: 121 GEKMKNKVAIIHKEAEEKKAMVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174

[Close]

BLAST of Csor.00g273610 vs. NCBI nr
Match: XP_008438060.1 (PREDICTED: uncharacterized protein At3g61260 isoform X1 [Cucumis melo] >XP_016899087.1 PREDICTED: uncharacterized protein At3g61260 isoform X2 [Cucumis melo] >TYK17591.1 remorin [Cucumis melo var. makuwa])

HSP 1 Score: 282 bits (721), Expect = 1.56e-94
Identity = 161/183 (87.98%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENSDS+PA  PPPASV         EDKEKA+V VP+ NKTKED VPKKASGGSI
Sbjct: 1   MVTAPENSDSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDPVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 174
            LEKKKAEYGEKMKNKVA+IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]

BLAST of Csor.00g273610 vs. NCBI nr
Match: XP_038884974.1 (uncharacterized protein At3g61260-like [Benincasa hispida])

HSP 1 Score: 278 bits (712), Expect = 3.65e-93
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV+APENSDS+PA  P PASV         E+KEKA+VPVPV NKTKED  PKKASGGSI
Sbjct: 1   MVSAPENSDSTPAPAPAPASVPTEVPIDALENKEKAMVPVPVVNKTKEDPEPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+VSAWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVSAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 174
            LEKKKAEY EKMKNKVA+IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL
Match: A0A6J1EZN4 (remorin OS=Cucurbita moschata OX=3662 GN=LOC111440827 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 8.35e-106
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60
           MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV
Sbjct: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60

Query: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120
           EKEKRFSFIKAWEDSEKSKAENK+QKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY
Sbjct: 61  EKEKRFSFIKAWEDSEKSKAENKSQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120

Query: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174
           GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Sbjct: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174

[Close]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL
Match: A0A6J1IED2 (remorin OS=Cucurbita maxima OX=3661 GN=LOC111473284 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 2.39e-105
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60
           MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV
Sbjct: 1   MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEV 60

Query: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120
           EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY
Sbjct: 61  EKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEY 120

Query: 121 GEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174
           GEKMKNKVAIIHKEAEEKKA VEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Sbjct: 121 GEKMKNKVAIIHKEAEEKKAMVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 174

[Close]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL
Match: A0A1S3AV45 (uncharacterized protein At3g61260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483282 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 7.53e-95
Identity = 161/183 (87.98%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENSDS+PA  PPPASV         EDKEKA+V VP+ NKTKED VPKKASGGSI
Sbjct: 1   MVTAPENSDSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDPVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 174
            LEKKKAEYGEKMKNKVA+IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL
Match: A0A5D3D041 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004610 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 7.53e-95
Identity = 161/183 (87.98%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENSDS+PA  PPPASV         EDKEKA+V VP+ NKTKED VPKKASGGSI
Sbjct: 1   MVTAPENSDSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDPVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 174
            LEKKKAEYGEKMKNKVA+IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL
Match: A0A0A0L3M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122490 PE=3 SV=1)

HSP 1 Score: 278 bits (710), Expect = 3.57e-93
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENS S+PA  PPPASV         EDKEKA+V VP+ NKTKED+VPKKASGGSI
Sbjct: 1   MVTAPENSVSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDTVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 174
            LEKKKAEYGEKMKNKV +IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVVLIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]

BLAST of Csor.00g273610 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.3e-47
Identity = 112/172 (65.12%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 11  SPASVPPPASVE-DKEKALVPVPVSNKTK-------EDSVPKKASGGSIDRDIALAEVEK 70
           +PA  P PA VE   EK   P PV +K         E+  PKKAS GS DRD+ LA++EK
Sbjct: 19  APAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEK 78

Query: 71  EKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGE 130
           EK+ SFIKAWE+SEKSKAEN+AQKK+S V AWENSKKA +EA+L+KIEE+LEKKKA+YGE
Sbjct: 79  EKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGE 138

Query: 131 KMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           KMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Sbjct: 139 KMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]

BLAST of Csor.00g273610 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 16  PPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDS 75
           PPP  + D  KAL    V  K  E+  P K +  S+DRD+ LA++ KEKR SF++AWE+S
Sbjct: 57  PPPEQIFDDSKALT---VVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEES 116

Query: 76  EKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEA 135
           EKSKAENKA+KK++ V AWENSKKA +EA+LKKIEEQLEKKKAEY E+MKNKVA IHKEA
Sbjct: 117 EKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEA 176

Query: 136 EEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Sbjct: 177 EERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of Csor.00g273610 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 171.0 bits (432), Expect = 8.3e-43
Identity = 104/175 (59.43%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 2   VAAPENSDSSPASVPPPASVEDKE---KALVPVPVSNKTKEDSVPKKASGGSIDRDIALA 61
           VA  E   + P  +P PA  E+K+   KA+VPV V  + +E+        GS++RD  LA
Sbjct: 33  VAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV-VPKEVEEEK-----KEGSVNRDAVLA 92

Query: 62  EVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKA 121
            VE EKR S IKAWE++EK K ENKA+KKLS++ +WEN+KKA +EA+LKK+EEQLEKKKA
Sbjct: 93  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 152

Query: 122 EYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGC 174
           EY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKK  GC
Sbjct: 153 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Csor.00g273610 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-42
Identity = 103/175 (58.86%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 2   VAAPENSDSSPASVPPPASVEDKE---KALVPVPVSNKTKEDSVPKKASGGSIDRDIALA 61
           VA  E   + P  +P PA  E+K+   KA+VPV          V ++   GS++RD  LA
Sbjct: 33  VAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV-------VPKVEEEKKEGSVNRDAVLA 92

Query: 62  EVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKA 121
            VE EKR S IKAWE++EK K ENKA+KKLS++ +WEN+KKA +EA+LKK+EEQLEKKKA
Sbjct: 93  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 152

Query: 122 EYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGC 174
           EY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKK  GC
Sbjct: 153 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of Csor.00g273610 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 161.4 bits (407), Expect = 6.6e-40
Identity = 101/165 (61.21%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 13  ASVPPPASVEDK---EKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFI 72
           AS P P S E+K    KA+V V  + +  ED   KK   GS+ RD  L  +E++KR S I
Sbjct: 16  ASEPSPPSKEEKSDDSKAIVLVVAAKEPTED---KKV--GSVHRDAVLVRLEQDKRISLI 75

Query: 73  KAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVA 132
           KAWE++EKSK ENKAQKK+S+V AWENSKKA++EA+LKKIEEQL KKKA Y E+MKNK+A
Sbjct: 76  KAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIA 135

Query: 133 IIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
            IHKEAEEK+A  EA+R E++LKAEE AAK+RATGT P K  G F
Sbjct: 136 QIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

The following BLAST results are available for this feature:

BLAST of Csor.00g273610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80837	6.0e-46	65.12	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
P93788	1.7e-45	65.34	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9M2D8	2.3e-45	64.15	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
Q9FFA5	1.2e-41	59.43	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q93YN8	1.7e-08	32.19	Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Csor.00g273610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538640.1	6.02e-106	100.00	remorin [Cucurbita pepo subsp. pepo] >KAG6597119.1 hypothetical protein SDJN03_1...	[more]
XP_022933402.1	1.72e-105	99.43	remorin [Cucurbita moschata]	[more]
XP_022974600.1	4.94e-105	99.43	remorin [Cucurbita maxima] >XP_022974657.1 remorin-like [Cucurbita maxima]	[more]
XP_008438060.1	1.56e-94	87.98	PREDICTED: uncharacterized protein At3g61260 isoform X1 [Cucumis melo] >XP_01689...	[more]
XP_038884974.1	3.65e-93	87.43	uncharacterized protein At3g61260-like [Benincasa hispida]	[more]

BLAST of Csor.00g273610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZN4	8.35e-106	99.43	remorin OS=Cucurbita moschata OX=3662 GN=LOC111440827 PE=3 SV=1	[more]
A0A6J1IED2	2.39e-105	99.43	remorin OS=Cucurbita maxima OX=3661 GN=LOC111473284 PE=3 SV=1	[more]
A0A1S3AV45	7.53e-95	87.98	uncharacterized protein At3g61260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5D3D041	7.53e-95	87.98	Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004610 PE=3 ...	[more]
A0A0A0L3M0	3.57e-93	86.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122490 PE=3 SV=1	[more]

BLAST of Csor.00g273610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45820.1	4.3e-47	65.12	Remorin family protein	[more]
AT3G61260.1	1.6e-46	64.15	Remorin family protein	[more]
AT5G23750.1	8.3e-43	59.43	Remorin family protein	[more]
AT5G23750.2	1.4e-42	58.86	Remorin family protein	[more]
AT3G48940.1	6.6e-40	61.21	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..152
None	No IPR available	COILS	Coil	Coil	coord: 92..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 13..174
None	No IPR available	PANTHER	PTHR31775:SF31	CARBOXY-TERMINAL REGION REMORIN	coord: 13..174
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 12..60 e-value: 2.4E-8 score: 33.9
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 65..169 e-value: 5.2E-33 score: 113.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g273610.m01	Csor.00g273610.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress
cellular_component	GO:0016020	membrane