Csor.00g273270 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g273270
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	non-specific lipid-transfer protein-like
Location	Csor_Chr06: 7845068 .. 7845663 (+)
RNA-Seq Expression	Csor.00g273270
Synteny	Csor.00g273270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGTAATCAAATTAACATTCCCTTTTCCTTTTCCTTCGCGCCATGAATCTAAAAAGCATTTTCAAGGGACAAATCTAAACAAAAAAATGCGTTGGCTATGATATTGGATGCTAATATTTTGGCGTTGGTGTGTATTGGGATGCAGGGTTGAAGGCTTTGAATTTGGAAGTGGCCTACCAAATGAGGTTGGGAATTGCCATCATCATTGA

mRNA sequence

ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGTGGCCTACCAAATGAGGTTGGGAATTGCCATCATCATTGA

Coding sequence (CDS)

ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCACCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATCCCAGTTCAAATTCCTCCCATCGATAATTCCACCAACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGTGGCCTACCAAATGAGGTTGGGAATTGCCATCATCATTGA

Protein sequence

MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVEGFEFGSGLPNEVGNCHHH

Homology

[Close]

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot
Match: O04004 (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-12
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           +C  V   L+PC  F+        G+ P  +CC+GV  L    KTK D+V +C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFL-------TGQEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 96  SMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEV 132
             I AYDP R+P +   CG+    P +D + +CS++
Sbjct: 89  KSI-AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKL 116

[Close]

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot
Match: P55958 (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-11
Identity = 40/129 (31.01%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 11  ISALTFIAML---TSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSC 70
           ++AL  IA     TSS   A +      +C  V Q++ PCL F+KG +     + P   C
Sbjct: 6   MAALVVIAAALAWTSSAEPAPAPAPGEEACGKVVQDIMPCLHFVKGEE-----KEPSKEC 65

Query: 71  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 130
           CSG  KL+ + KT   K + C+CI ++   I       +  +P+ C I   +PPI    +
Sbjct: 66  CSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLPPITADFD 125

Query: 131 CSEVEGFEF 137
           CS+++   F
Sbjct: 126 CSKIQSTIF 129

[Close]

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot
Match: Q43871 (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare OX=4513 GN=CW18 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 8   RLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSC 67
           R   + L  +A++ + ++VA    +   +C  V+  L PC ++ KGS     G +P   C
Sbjct: 3   RTAATKLALVALVAAMLLVAADAAI---TCGQVSSALGPCAAYAKGS-----GTSPSAGC 62

Query: 68  CSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTN 127
           CSGV +LA  A++  DK   C C+K   S+ GAY+  R   IP  CG+ V    I  S +
Sbjct: 63  CSGVKRLAGLARSTADKQATCRCLK---SVAGAYNAGRAAGIPSRCGVSVPY-TISASVD 114

Query: 128 CSEV 132
           CS++
Sbjct: 123 CSKI 114

[Close]

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot
Match: Q9ZPW9 (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC +V Q+L PC+S++    G     NPP +CC GV  LAA   T  DK   C+CIK   
Sbjct: 27  SCSVVLQDLQPCVSYLTSGSG-----NPPETCCDGVKSLAAATTTSADKKAACQCIKSVA 86

Query: 96  SMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST 127
           + +    P    ++   CG  +PV   P  + T
Sbjct: 87  NSV-TVKPELAQALASNCGASLPVDASPTVDCT 113

[Close]

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot
Match: P10975 (Non-specific lipid-transfer protein C, cotyledon-specific isoform OS=Ricinus communis OX=3988 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08
Identity = 34/115 (29.57%), Postives = 53/115 (46.09%), Query Frame = 0


Query: 17  IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAA 76
           + +L S +    + N     C  V  + + C+ F  G D       P  +CC+G+ +LA 
Sbjct: 8   VLLLLSFLFCLANTNEAAVPCSTVDMKAAACVGFATGKD-----SKPSQACCTGLQQLAQ 67

Query: 77  DAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEV 132
             KT +DK  +C C+K S   +G  D   +  IP  C I V   P+  +TNC  +
Sbjct: 68  TVKTVDDKKAICRCLKASSKSLGIKD-QFLSKIPAACNIKVGF-PVSTNTNCETI 115

[Close]

BLAST of Csor.00g273270 vs. NCBI nr
Match: XP_022938404.1 (non-specific lipid-transfer protein 3-like [Cucurbita moschata] >KAG6597085.1 Non-specific lipid-transfer protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306 bits (784), Expect = 4.68e-105
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH
Sbjct: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150

[Close]

BLAST of Csor.00g273270 vs. NCBI nr
Match: KAG7028550.1 (Non-specific lipid-transfer protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300 bits (769), Expect = 9.08e-103
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GG LG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGSLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PIDNSTNCSEVEGFEFGSG+PNEVGNCHHH
Sbjct: 121 PIDNSTNCSEVEGFEFGSGIPNEVGNCHHH 150

[Close]

BLAST of Csor.00g273270 vs. NCBI nr
Match: XP_022974952.1 (non-specific lipid-transfer protein 3-like [Cucurbita maxima])

HSP 1 Score: 298 bits (762), Expect = 1.06e-101
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHH 149
           PIDNST+CSEVEGFEFGSG+ NEVGNCHH
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGNCHH 149

[Close]

BLAST of Csor.00g273270 vs. NCBI nr
Match: XP_023539575.1 (non-specific lipid-transfer protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295 bits (756), Expect = 8.73e-101
Identity = 144/150 (96.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGS+GGFLG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSNGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLS+IGAYDPNRIPSI +GCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSIIGAYDPNRIPSIAKGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PIDNST+CSEVEGFEFGSG+PNEVGNCHHH
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMPNEVGNCHHH 150

[Close]

BLAST of Csor.00g273270 vs. NCBI nr
Match: XP_022974667.1 (non-specific lipid-transfer protein 3-like [Cucurbita maxima])

HSP 1 Score: 295 bits (755), Expect = 1.24e-100
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALT IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTVIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHH 149
           PIDNST+CSEVEGFEFGSG+ NEVGNCHH
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGNCHH 149

[Close]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL
Match: A0A6J1FDZ9 (non-specific lipid-transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111444661 PE=3 SV=1)

HSP 1 Score: 306 bits (784), Expect = 2.27e-105
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH
Sbjct: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150

[Close]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL
Match: A0A6J1IBN9 (non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111473775 PE=3 SV=1)

HSP 1 Score: 298 bits (762), Expect = 5.14e-102
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHH 149
           PIDNST+CSEVEGFEFGSG+ NEVGNCHH
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGNCHH 149

[Close]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL
Match: A0A6J1IAV8 (non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111473347 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 6.01e-101
Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGIYNLRLMISALT IAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG
Sbjct: 1   MSGIYNLRLMISALTVIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHH 149
           PIDNST+CSEVEGFEFGSG+ NEVGNCHH
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGNCHH 149

[Close]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL
Match: A0A6J1IV21 (non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC111479562 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 2.27e-64
Identity = 98/150 (65.33%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGI++LR  I AL F+A+     MV LSQ+ D+ +CI V QELSPCL FIKGSD GF G
Sbjct: 1   MSGIFHLRSTIGALAFVAIFICPQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENP PSCC+GV KL  DAKTK D+VDLCECIK SLSMIG YDP+RIP IPE CGIP QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PID+ST+CS+ EG++FGS   +E+ + H+H
Sbjct: 121 PIDSSTDCSKAEGYQFGSAFSSELEDNHNH 150

[Close]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL
Match: A0A6J1ECH4 (non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431953 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 1.31e-63
Identity = 98/150 (65.33%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60
           MSGI++LR  I AL F+A+ T S MV LSQ+ D+ +CI V QELSPCL FIKGSD  F G
Sbjct: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60

Query: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120
           ENP PSCC+GV KL  DAKTK D+VDLCECIK SLSMIG YDP+RIP IPE CGIP QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTNCSEVEGFEFGSGLPNEVGNCHHH 150
           PID+ST+CS+ E ++FGS    E+ + H+H
Sbjct: 121 PIDSSTDCSKAEDYQFGSAFSYELEDNHNH 150

[Close]

BLAST of Csor.00g273270 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 8.0e-10
Identity = 33/93 (35.48%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC +V Q+L PC+S++    G     NPP +CC GV  LAA   T  DK   C+CIK   
Sbjct: 27  SCSVVLQDLQPCVSYLTSGSG-----NPPETCCDGVKSLAAATTTSADKKAACQCIKSVA 86

Query: 96  SMIGAYDPNRIPSIPEGCG--IPVQIPPIDNST 127
           + +    P    ++   CG  +PV   P  + T
Sbjct: 87  NSV-TVKPELAQALASNCGASLPVDASPTVDCT 113

[Close]

BLAST of Csor.00g273270 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07
Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 19  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADA 78
           +L   +++AL       SC  V  +L PCLS++  + GG +    P  CC+G+T L + A
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYV--TQGGPV----PTLCCNGLTTLKSQA 64

Query: 79  KTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI--PVQIPPIDNSTNCSEVE 133
           +T  D+  +C CIK ++  +    P  I +   +P  CG+  P +  P   ST+C  ++
Sbjct: 65  QTSVDRQGVCRCIKSAIGGL-TLSPRTIQNALELPSKCGVDLPYKFSP---STDCDSIQ 113

[Close]

BLAST of Csor.00g273270 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-07
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 36  SCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSL 95
           SC  V   L PC+ ++    GG +    P SCC+G+  L+  A + +DK  +C CIK  +
Sbjct: 25  SCNAVQANLYPCVVYV--VQGGAI----PYSCCNGIRMLSKQATSASDKQGVCRCIKSVV 84

Query: 96  SMI--GAYDPNRIPSIPEGCGIPVQIPPIDNSTNCSEVE 133
             +   +    +  ++P  CG+ +    ID STNC+ ++
Sbjct: 85  GRVSYSSIYLKKAAALPGKCGVKLPY-KIDPSTNCNSIK 116

[Close]

BLAST of Csor.00g273270 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 36/115 (31.30%), Postives = 59/115 (51.30%), Query Frame = 0


Query: 19  MLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADA 78
           +L   +++AL       SC  V  +L PCLS++  + GG +    P  CC+G+T L + A
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYV--TQGGPV----PTLCCNGLTTLKSQA 64

Query: 79  KTKNDKVDLCECIKKSLSMIGAYDPNRIPS---IPEGCGI--PVQIPPIDNSTNC 129
           +T  D+  +C CIK ++  +    P  I +   +P  CG+  P +  P   ST+C
Sbjct: 65  QTSVDRQGVCRCIKSAIGGL-TLSPRTIQNALELPSKCGVDLPYKFSP---STDC 109

[Close]

BLAST of Csor.00g273270 vs. TAIR 10
Match: AT2G15325.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 7.0e-06
Identity = 24/89 (26.97%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 44  LSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDP 103
           L+PCL ++           P P CCSG+ K+    KT +D+ D+C C+    ++  A D 
Sbjct: 38  LTPCLRYLWAPPEA----KPSPECCSGLDKVNKGVKTYDDRHDMCICLSSEAAITSA-DQ 97

Query: 104 NRIPSIPEGCGIPVQIPPIDNSTNCSEVE 133
            +  ++P+ C + +   P+    +CS ++
Sbjct: 98  YKFDNLPKLCNVAL-FAPVGPKFDCSTIK 120

The following BLAST results are available for this feature:

BLAST of Csor.00g273270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04004	4.9e-12	36.46	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1	[more]
P55958	5.4e-11	31.01	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE...	[more]
Q43871	1.2e-10	33.87	Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare OX=4513 GN=CW18 PE=1...	[more]
Q9ZPW9	1.1e-08	35.48	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE...	[more]
P10975	4.3e-08	29.57	Non-specific lipid-transfer protein C, cotyledon-specific isoform OS=Ricinus com...	[more]

BLAST of Csor.00g273270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938404.1	4.68e-105	100.00	non-specific lipid-transfer protein 3-like [Cucurbita moschata] >KAG6597085.1 No...	[more]
KAG7028550.1	9.08e-103	98.00	Non-specific lipid-transfer protein 3 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022974952.1	1.06e-101	97.99	non-specific lipid-transfer protein 3-like [Cucurbita maxima]	[more]
XP_023539575.1	8.73e-101	96.00	non-specific lipid-transfer protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974667.1	1.24e-100	97.32	non-specific lipid-transfer protein 3-like [Cucurbita maxima]	[more]

BLAST of Csor.00g273270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDZ9	2.27e-105	100.00	non-specific lipid-transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IBN9	5.14e-102	97.99	non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IAV8	6.01e-101	97.32	non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IV21	2.27e-64	65.33	non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1ECH4	1.31e-63	65.33	non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Csor.00g273270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18370.1	8.0e-10	35.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	3.7e-07	30.25	lipid transfer protein 6	[more]
AT5G01870.1	4.9e-07	30.30	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.2	1.8e-06	31.30	lipid transfer protein 6	[more]
AT2G15325.1	7.0e-06	26.97	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 100..117 score: 24.79 coord: 83..98 score: 30.38 coord: 119..130 score: 37.05 coord: 36..52 score: 35.11
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 11..131
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 109..131
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..128 e-value: 5.7E-6 score: 35.8
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..118 e-value: 7.4E-5 score: 22.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 35..132 e-value: 2.6E-23 score: 84.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 36..130
None	No IPR available	PANTHER	PTHR33076:SF73	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 11..131
None	No IPR available	CDD	cd01960	nsLTP1	coord: 36..129 e-value: 1.20254E-24 score: 88.9461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g273270.m01	Csor.00g273270.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding