Csor.00g271370 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTATCTGCTTGGAATTGTTAA ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTATCTGCTTGGAATTGTTAA ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTATCTGCTTGGAATTGTTAA MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWNWPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSSWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWNC Homology
BLAST of Csor.00g271370 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15 Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy Swiss-Prot
Match: O04023 (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.4e-12 Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 0
BLAST of Csor.00g271370 vs. NCBI nr
Match: KAG6586252.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 342 bits (876), Expect = 1.16e-118 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g271370 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 340 bits (871), Expect = 6.73e-118 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g271370 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia]) HSP 1 Score: 210 bits (534), Expect = 1.64e-66 Identity = 104/159 (65.41%), Postives = 122/159 (76.73%), Query Frame = 0
BLAST of Csor.00g271370 vs. NCBI nr
Match: XP_031736682.1 (protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_021167 [Cucumis sativus]) HSP 1 Score: 209 bits (533), Expect = 4.46e-66 Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 0
BLAST of Csor.00g271370 vs. NCBI nr
Match: KAE8010230.1 (hypothetical protein FH972_006616 [Carpinus fangiana]) HSP 1 Score: 113 bits (283), Expect = 1.40e-28 Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy TrEMBL
Match: A0A6J1FDP3 (protein SRC2 OS=Cucurbita moschata OX=3662 GN=LOC111444443 PE=4 SV=1) HSP 1 Score: 340 bits (871), Expect = 3.26e-118 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy TrEMBL
Match: A0A6J1DB07 (protein SRC2 OS=Momordica charantia OX=3673 GN=LOC111018814 PE=4 SV=1) HSP 1 Score: 210 bits (534), Expect = 7.92e-67 Identity = 104/159 (65.41%), Postives = 122/159 (76.73%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy TrEMBL
Match: A0A0A0LIU2 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1) HSP 1 Score: 209 bits (533), Expect = 2.16e-66 Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy TrEMBL
Match: A0A5N6QV91 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_006616 PE=4 SV=1) HSP 1 Score: 113 bits (283), Expect = 6.78e-29 Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of Csor.00g271370 vs. ExPASy TrEMBL
Match: A0A6P3ZA45 (protein SRC2 homolog OS=Ziziphus jujuba OX=326968 GN=LOC107411858 PE=4 SV=1) HSP 1 Score: 110 bits (275), Expect = 1.69e-27 Identity = 59/155 (38.06%), Postives = 92/155 (59.35%), Query Frame = 0
BLAST of Csor.00g271370 vs. TAIR 10
Match: AT1G09070.1 (soybean gene regulated by cold-2 ) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13 Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 0
BLAST of Csor.00g271370 vs. TAIR 10
Match: AT3G05440.1 (C2 domain-containing protein ) HSP 1 Score: 61.2 bits (147), Expect = 8.7e-10 Identity = 29/99 (29.29%), Postives = 52/99 (52.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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