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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCGTGGCACGTCACACTTCCAATTCTCTCTTCATTGGAACGCAAGGACATGGTAGCAGCGGTTATCTTCACTGTACAGCATGAAGGCCAAAGGGCCGGGGGAAGTAAGCTTGATGGCTTTCTGTTTGAAGTCTACTGATTTAAAAAATCTCAAGGTTACTTTTTTCCTGTTCTGTTAAAAATTCTGTGTGGCAATAGAGTGGAGACGATCTCCATGATTGGTAATGGGTTTTCTGAAAGTTGCCCTGTTGGAGCTTGGATGAGGTATCAGTTTCAAGTAAGATTTTTTTTCATTTTGTGCCCAGATTGTATTTCATTTATTTATTTATTTTAAATGTTCTATAAGATCATTTGTTCACATAAGCTTAAACGTTCACTATTTCATTCAAGTGCGAGTTCTGTTACTAAGTCTGAGTATGGATTTTGTTCTGCACCCGTATTTCCCAATGGTGGATTTTTATCTACTATGATCTTTTATGGTAATTGAGCATAATTCTTCTTCATAATCCCCTGAAGTTGATCAAAAGAGAGTTAGGTTTGAAACTCTTTTGTGTCTGAACAGGCCTCACTCTTTGTCATCAATTGGATTGCTTGAAGAGTATTGTCCAACGTTATACTGATCTTGTTTTTTAGTTTATGCTGCCTTTTTCAGCTGCTCAAATAAGAATAGTTCCTCTTGAAGTTTTACGGATATGCATGTCAACGACATTGTTTTTGATGCAGTTGTTGTTCCAATAG mRNA sequence ATGCCGTGGCACGTCACACTTCCAATTCTCTCTTCATTGGAACGCAAGGACATGGTAGCAGCGGTTATCTTCACTGTACAGCATGAAGGCCAAAGGGCCGGGGGAAGTAAGCTTGATGGCTTTCTAGTGGAGACGATCTCCATGATTGGTAATGGGTTTTCTGAAAGTTGCCCTGTTGGAGCTTGGATGAGGTATCAGTTTCAATTGTTGTTCCAATAG Coding sequence (CDS) ATGCCGTGGCACGTCACACTTCCAATTCTCTCTTCATTGGAACGCAAGGACATGGTAGCAGCGGTTATCTTCACTGTACAGCATGAAGGCCAAAGGGCCGGGGGAAGTAAGCTTGATGGCTTTCTAGTGGAGACGATCTCCATGATTGGTAATGGGTTTTCTGAAAGTTGCCCTGTTGGAGCTTGGATGAGGTATCAGTTTCAATTGTTGTTCCAATAG Protein sequence MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGSKLDGFLVETISMIGNGFSESCPVGAWMRYQFQLLFQ
Homology
BLAST of Csor.00g267170 vs. NCBI nr
Match: KAG6607650.1 (hypothetical protein SDJN03_00992, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149 bits (377), Expect = 1.88e-45 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query: 1 MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGSKLDGFLVETISMIGNGFSESCPVG 60
MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGSKLDGFLVETISMIGNGFSESCPVG
Sbjct: 1 MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGSKLDGFLVETISMIGNGFSESCPVG 60
Query: 61 AWMRYQFQLLFQ 72
AWMRYQFQLLFQ
Sbjct: 61 AWMRYQFQLLFQ 72
BLAST of Csor.00g267170 vs. NCBI nr
Match: KAG7037252.1 (hypothetical protein SDJN02_00875, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 75.1 bits (183), Expect = 5.16e-15 Identity = 39/51 (76.47%), Postives = 41/51 (80.39%), Query Frame = 0
Query: 1 MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGSKL----DGFLVETIS 47
MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGG + GF T+S
Sbjct: 76 MPWHVTLPILSSLERKDMVAAVIFTVQHEGQRAGGIVVPIEKQGFFGSTLS 126
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6607650.1 | 1.88e-45 | 100.00 | hypothetical protein SDJN03_00992, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7037252.1 | 5.16e-15 | 76.47 | hypothetical protein SDJN02_00875, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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