Csor.00g266410 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCGTGCACCCAGTTCGAGAGCATCAATCGCAATCATTTTTGCCCTCATCTCCATTCCCCCATGGCCGACACACTCCGCCAAAATGAGCTATGTCCAAGAAGCCTGCAGCGTAACACAACACCAAAATCTCTGTATCCAATCGCTGTCGCCATTTTCAAGCAGCGCCAAGCGAAGCCCCACGAAATGGGCGCAAGCGGGCGTGTCGGTGACAATATCAGAGTCTAAAACCGTGGCGCGATTCCTGGGGAGGGTGAAGAACGGCAAGCGGCTCATGGGGAGAAACAGGGCCGCAGTTTCCGACTGTGTGGAGGTCTGCGAAGCCGCCATTGCTGAGCTCCACAGGTCGCTTGGGTTTCTTAGAAGACTGGGTAAGAGGAATTTGATAAGGAATCGCGTGGTGAAGGCTGGTTATATTACAAGTAATGCACTCGCCTTGATTTCCAAACTGGCTGCCTCGGGCTTCCAAACTGCCCCAAAACAGTAAGAGATGACAGTATCCATCAAAGATTAAATATAAATACAGAATGTATTACAACCCTTAAAAGAATTAAATGAAATTAATGTTATATTACTATATACGAAATAAATATTGGTCTTATTTATTGGAGGGGTGCGCCAGGCCCAAGCTGTAGTGCAACGCATGGGCGACGCTCGAGAGCCCCAGTAGCAAGCTACTGTAGTGGACCCTCCCCCTTGAAAAATTAATTTAATATCATGTGGGCCGATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGACTTGTCCAGTCTTCCGACAGTGTTTTTATAGCCTCCTTCTCTCTCCATTTTCTGGAACTAATCGATGTGGGACAAAGCCTTATGTATAGAAAATTTGCATAGTTTCCAACCATTGTTATTAATTTTGTGTATAACTTTACATATATTTTCAATTAAAAGATTCAAAATCTTTAAACTCCCACGTACTTAACTAAGAAAATTTAGTTTATACTCTTAATTATAGCATGATAAATCAATTATATATGTTGTTAAAATTTCATTTGAACATCGTTAATGTTTAATTCTCATATGTGTAAGTGGGTATGAATCATTTTTTTTAATTAATATTAACATTTTGTTCACCTTCTCTTGTTACTTACTTATTTACTTAATGTTATTCAGGTAATGTCTAATTTGATTTCTTTGAAAGAAACTTACTTTCGATCGAGTTAGGTTGCATTTGGGTATTTGAATTTTACGATGAAGGTTTACATATGGTTACAATTTGGTTCCTCCACCTGCCTTTTTATAAATAAGAAAGTCGTGATACCTTATGGTAAATCGTAACGAAAGGCTAAATATCATACCGGATATTTGTTTATAAAAAAATGTCAAATGTGATGCTTATAGTAAACCGTAATGAAAGGTAAAATATCCTCAATCATACGAGATATTTGAATGTTTTCATCTTTATATTTGAATGTTTTCATCTTTTAACTAGAGCAGTCACTGAAATTGTAGGCCACTAGAAAGCTGGTACACGGCTTTTCCATCATTTACAGCTTTAAACTCACCAGAAGTTCGCTGCAATTGTGAAGAATTGAGTGGAATCGACGTAATGAGGTTCCGGTCCCTCCTTCAACCGATACAGGACCAACATTTGCTGCAGCATATCATTCACAAGTAATGGAAATGGATTGAATGGTGAATACCTCATTGTTTTGTTCTTCCCACAAGAGGTATTCTAACGTGATCTTGAATATTCAGCCCGAAAGCCTTGAGGGAAAGCCCGAGAGGGAAAGCCCGAAAAGGAAAGCCCAAAGAGGACAATATCGGTGGATCTGGGTGATTACAATTCAGCTGCAGCACTGAAGGCAGAGACAAGGGCATCCATCCCAACAACCTGCAACCAACTTCTTCTAGTCCTTGTAGCAATTGCAGCTCCTGCGACCGCACCCACAATCGATCCATTTAG ATGTTGCGTGCACCCAGTTCGAGAGCATCAATCGCAATCATTTTTGCCCTCATCTCCATTCCCCCATGGCCGACACACTCCGCCAAAATGAGCTATGTCCAAGAAGCCTGCAGCGTAACACAACACCAAAATCTCTGTATCCAATCGCTGTCGCCATTTTCAAGCAGCGCCAAGCGAAGCCCCACGAAATGGGCGCAAGCGGGCGTGTCGGTGACAATATCAGAGTCTAAAACCGTGGCGCGATTCCTGGGGAGGGTGAAGAACGGCAAGCGGCTCATGGGGAGAAACAGGGCCGCAGTTTCCGACTGTGTGGAGGTCTGCGAAGCCGCCATTGCTGAGCTCCACAGGTCGCTTGGGTTTCTTAGAAGACTGGGTAAGAGGAATTTGATAAGGAATCGCGTGGTGAAGGCTGGTTATATTACAAGTAATGCACTCGCCTTGATTTCCAAACTGGCTGCCTCGGGCTTCCAAACTGCCCCAAAACAGCCACTAGAAAGCTGGTACACGGCTTTTCCATCATTTACAGCTTTAAACTCACCAGAAGTTCGCTGCAATTGTGAAGAATTGAGTGGAATCGACGTAATGAGGTTCCGGTCCCTCCTTCAACCGATACAGGACCAACATTTGCTGCAGCATATCATTCACAACTGCAGCACTGAAGGCAGAGACAAGGGCATCCATCCCAACAACCTGCAACCAACTTCTTCTAGTCCTTGTAGCAATTGCAGCTCCTGCGACCGCACCCACAATCGATCCATTTAG ATGTTGCGTGCACCCAGTTCGAGAGCATCAATCGCAATCATTTTTGCCCTCATCTCCATTCCCCCATGGCCGACACACTCCGCCAAAATGAGCTATGTCCAAGAAGCCTGCAGCGTAACACAACACCAAAATCTCTGTATCCAATCGCTGTCGCCATTTTCAAGCAGCGCCAAGCGAAGCCCCACGAAATGGGCGCAAGCGGGCGTGTCGGTGACAATATCAGAGTCTAAAACCGTGGCGCGATTCCTGGGGAGGGTGAAGAACGGCAAGCGGCTCATGGGGAGAAACAGGGCCGCAGTTTCCGACTGTGTGGAGGTCTGCGAAGCCGCCATTGCTGAGCTCCACAGGTCGCTTGGGTTTCTTAGAAGACTGGGTAAGAGGAATTTGATAAGGAATCGCGTGGTGAAGGCTGGTTATATTACAAGTAATGCACTCGCCTTGATTTCCAAACTGGCTGCCTCGGGCTTCCAAACTGCCCCAAAACAGCCACTAGAAAGCTGGTACACGGCTTTTCCATCATTTACAGCTTTAAACTCACCAGAAGTTCGCTGCAATTGTGAAGAATTGAGTGGAATCGACGTAATGAGGTTCCGGTCCCTCCTTCAACCGATACAGGACCAACATTTGCTGCAGCATATCATTCACAACTGCAGCACTGAAGGCAGAGACAAGGGCATCCATCCCAACAACCTGCAACCAACTTCTTCTAGTCCTTGTAGCAATTGCAGCTCCTGCGACCGCACCCACAATCGATCCATTTAG MLRAPSSRASIAIIFALISIPPWPTHSAKMSYVQEACSVTQHQNLCIQSLSPFSSSAKRSPTKWAQAGVSVTISESKTVARFLGRVKNGKRLMGRNRAAVSDCVEVCEAAIAELHRSLGFLRRLGKRNLIRNRVVKAGYITSNALALISKLAASGFQTAPKQPLESWYTAFPSFTALNSPEVRCNCEELSGIDVMRFRSLLQPIQDQHLLQHIIHNCSTEGRDKGIHPNNLQPTSSSPCSNCSSCDRTHNRSI Homology
BLAST of Csor.00g266410 vs. ExPASy Swiss-Prot
Match: O22244 (Pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PMEI6 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11 Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy Swiss-Prot
Match: Q9SI74 (Pectinesterase inhibitor 10 OS=Arabidopsis thaliana OX=3702 GN=PMEI10 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09 Identity = 42/168 (25.00%), Postives = 82/168 (48.81%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy Swiss-Prot
Match: Q9SB37 (Pectinesterase inhibitor 7 OS=Arabidopsis thaliana OX=3702 GN=PMEI7 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07 Identity = 43/168 (25.60%), Postives = 73/168 (43.45%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy Swiss-Prot
Match: Q9STY5 (Pectinesterase inhibitor 11 OS=Arabidopsis thaliana OX=3702 GN=PMEI11 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 45/185 (24.32%), Postives = 81/185 (43.78%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy Swiss-Prot
Match: Q84WE4 (Pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PMEI3 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06 Identity = 33/116 (28.45%), Postives = 63/116 (54.31%), Query Frame = 0
BLAST of Csor.00g266410 vs. NCBI nr
Match: KAG6575825.1 (Pectinesterase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 502 bits (1293), Expect = 3.00e-179 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
BLAST of Csor.00g266410 vs. NCBI nr
Match: KAG7014362.1 (Pectinesterase inhibitor 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 306 bits (783), Expect = 5.94e-103 Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Csor.00g266410 vs. NCBI nr
Match: XP_022953719.1 (pectinesterase inhibitor 6-like [Cucurbita moschata]) HSP 1 Score: 279 bits (713), Expect = 8.83e-92 Identity = 155/197 (78.68%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of Csor.00g266410 vs. NCBI nr
Match: XP_023548990.1 (pectinesterase inhibitor 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255 bits (651), Expect = 2.84e-82 Identity = 144/193 (74.61%), Postives = 148/193 (76.68%), Query Frame = 0
BLAST of Csor.00g266410 vs. NCBI nr
Match: XP_022991771.1 (pectinesterase inhibitor 6-like [Cucurbita maxima]) HSP 1 Score: 221 bits (563), Expect = 2.53e-69 Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy TrEMBL
Match: A0A6J1GQH3 (pectinesterase inhibitor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111456166 PE=4 SV=1) HSP 1 Score: 279 bits (713), Expect = 4.28e-92 Identity = 155/197 (78.68%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy TrEMBL
Match: A0A6J1JRQ0 (pectinesterase inhibitor 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488304 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 1.23e-69 Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy TrEMBL
Match: A0A5D3D1R1 (21 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00630 PE=4 SV=1) HSP 1 Score: 222 bits (565), Expect = 1.26e-69 Identity = 123/194 (63.40%), Postives = 139/194 (71.65%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy TrEMBL
Match: A0A1S3BSW5 (21 kDa protein OS=Cucumis melo OX=3656 GN=LOC103492810 PE=4 SV=1) HSP 1 Score: 222 bits (565), Expect = 1.26e-69 Identity = 123/194 (63.40%), Postives = 139/194 (71.65%), Query Frame = 0
BLAST of Csor.00g266410 vs. ExPASy TrEMBL
Match: A0A0A0KAX0 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397050 PE=4 SV=1) HSP 1 Score: 221 bits (564), Expect = 1.78e-69 Identity = 124/193 (64.25%), Postives = 138/193 (71.50%), Query Frame = 0
BLAST of Csor.00g266410 vs. TAIR 10
Match: AT3G62820.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 8.2e-23 Identity = 72/190 (37.89%), Postives = 107/190 (56.32%), Query Frame = 0
BLAST of Csor.00g266410 vs. TAIR 10
Match: AT2G47670.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 7.7e-13 Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Csor.00g266410 vs. TAIR 10
Match: AT1G62760.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 7.2e-11 Identity = 42/168 (25.00%), Postives = 82/168 (48.81%), Query Frame = 0
BLAST of Csor.00g266410 vs. TAIR 10
Match: AT5G62350.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09 Identity = 40/164 (24.39%), Postives = 73/164 (44.51%), Query Frame = 0
BLAST of Csor.00g266410 vs. TAIR 10
Match: AT4G25260.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08 Identity = 43/168 (25.60%), Postives = 73/168 (43.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|