Csor.00g266300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTAAATTACTACTCTCTTTCTAACTCTGTCAAGCTAGATCTTTCCCAAGATTGCATACTGTTGGGTCTTCTTCTTGATCTTTGGTTTTGTGATCTTCATTTTCTCCATTTTTACTTCTCGAACCGTGCTTGGTCGCGCGATATATATGAAATCATCTCAACTTCGTTCTTGATTTTGTCTCTTTTACTTTGGTATTGGGAGTCAGGGTCTATCTTGAGAGTTCTTGGGTAGAAATGTCTTACGAAGTGATGATGGTCGTGTTAATTCCTTTGTGTTGCTTTCTAATTGACGTGTTCTTGGACTTCGTAAAAGTTGGTTGGTTTTGGGCTCGAGTATTGTGGGAAAATCATGATGGGTTAGTTAGGGTTCTAAATAGTTCCTTTTTTTCTTACTTTGGACGGTTGTAAGTTTTGACTCTGGTACGACCCGTGTGTGTGTGTATGTATATACGTTGAGGATTATCTGTCAAATCATATATATTCGGGTTGTAGAAACTGGTTTTCTGTTGACATCGTATACTGTACATTTGGTGGGGATGCACTATTGTTTTTTTGATTTGTAGGACTTGAAAGAATTCTTTAGTTTCTTGGGTCAACATAAAGCTGAGACTCGTTGCTTAGGCATTATTATGTTGCAAGTCAACATAGTCAACTAAGGCTAAGGGCTTATCTTGTTGGCTTTTTTGCTGAATTTTATTTCATAACATCGTCTTAGGTGGTTGTTTCAACTTTTGATTAGGTGGCTGACTCTTTGAGTGCATTCTGTTGCTTGATATATGGACTCAGAAACGGGATTTAGTTTAATTCTTTCTTCTGATGATTTTCCATAAGGGCATATCTTTAGAGACTTGCAAGTTCTTTATACTTGGATGGTTACTGATAACATTTGTTTAATAAAATGTAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGACTGGACAAGGTCTTTATCACCGTGCAGCTCCCAGACTCTAAGGATTCTAAGGTCAATCTTGAGCCAGATGGAGTATTCACTTTCTCTGGTAGTGCTGGTTCAGAGAATCACCATTATGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAGGTATATAGACATTACTCAAAGTTTTTGCTATTTCTTTTCCGTTTCGAGTATGCTATCATATAATGAATGGACCTAGTAGTTCGCATCTAATTTCTAAGTTGACAGGAAAATTTGAAGAAATATATGATACACCATTTAACACATATATTTCGTTATAACAGGAGAGTAAAGTGAACATTGGAGTTCGGAGCATATTCTGTATCTTAGAGAAGGCAGAGAAGGGATGGTGGAAAAAGCTATTGCGTGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGATAATGGTAGTCTAGTTGTGCCTTAACTTGTTGGGTTATTACCTTGAATTAAACTTTTCATCCTATCTTGTGTAGCTAATGTGTACTGATTAACTCTTTTGTTGTTCAGGAACTGCTGGTCTAGGTGACATGGATTTGGGAGGCATGGACTTTTCGGTAAGGATGTGTTAGTTGAACTGATTGCTGTATTTTGCATCTCTGTATCTTGTTCTAATCAATGTTTTCATCTTGCAGAAATTTGGTGACATGGGTGGCATGGGGGGCTTGGGTGGAATGGGTGGAATGGGTGGCATGGGCGGTATGGGTGGCTTGGGCGACATGGACATGGGAGGCATGGGAGATGATAATGAATTTGACGGGAGTGATGATGATGGTAAGTTCCCATTTTGCTTAAGCAGTGCAGAATGATTTTCTGTGCCGTGGGTATATGAATTGTTTCTGCAGTGGTTGAATGTCTAATTAAGAGATTAGCATCGTCGAAAGACTTTCGACTGCATTATTCACACTTAAGTTGACTGTTTAACTTGTTTGCTGCATTTGGCTGATCGGACCGATTTAGCTATTTTGTGTTGATGCTGTTATGTAGCTATTTTGTGTTGATGCTGTTATGTTATTTTGTTTTCGTAGAACAAGAGGTCTCAAAGCCAGAAAAAAGCGGTGATAAGGCTGAATCTGCTAAGCCAGAGGCGGAAATCAAAGGTGGATCCTCAGAAGAGAAAAAGGAAGCAGCTAGCACATGA ATGAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGACTGGACAAGGTCTTTATCACCGTGCAGCTCCCAGACTCTAAGGATTCTAAGGTCAATCTTGAGCCAGATGGAGTATTCACTTTCTCTGGTAGTGCTGGTTCAGAGAATCACCATTATGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAGGAGAGTAAAGTGAACATTGGAGTTCGGAGCATATTCTGTATCTTAGAGAAGGCAGAGAAGGGATGGTGGAAAAAGCTATTGCGTGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGATAATGGAACTGCTGGTCTAGGTGACATGGATTTGGGAGGCATGGACTTTTCGAAATTTGGTGACATGGGTGGCATGGGGGGCTTGGGTGGAATGGGTGGAATGGGTGGCATGGGCGGTATGGGTGGCTTGGGCGACATGGACATGGGAGGCATGGGAGATGATAATGAATTTGACGGGAGTGATGATGATGAACAAGAGGTCTCAAAGCCAGAAAAAAGCGGTGATAAGGCTGAATCTGCTAAGCCAGAGGCGGAAATCAAAGGTGGATCCTCAGAAGAGAAAAAGGAAGCAGCTAGCACATGA ATGAGTCGTCATCCTGAGGTGAAATGGGCCCAGAGACTGGACAAGGTCTTTATCACCGTGCAGCTCCCAGACTCTAAGGATTCTAAGGTCAATCTTGAGCCAGATGGAGTATTCACTTTCTCTGGTAGTGCTGGTTCAGAGAATCACCATTATGAACTGAAGTTGGAGCTTTTTGATAAAGTTAATGTTGAGGAGAGTAAAGTGAACATTGGAGTTCGGAGCATATTCTGTATCTTAGAGAAGGCAGAGAAGGGATGGTGGAAAAAGCTATTGCGTGGAGATGGAAAGCCACCCCATTATGTCAAAGTAGATTGGGACAAATGGGTGGATGAGGATGAAGATAATGGAACTGCTGGTCTAGGTGACATGGATTTGGGAGGCATGGACTTTTCGAAATTTGGTGACATGGGTGGCATGGGGGGCTTGGGTGGAATGGGTGGAATGGGTGGCATGGGCGGTATGGGTGGCTTGGGCGACATGGACATGGGAGGCATGGGAGATGATAATGAATTTGACGGGAGTGATGATGATGAACAAGAGGTCTCAAAGCCAGAAAAAAGCGGTGATAAGGCTGAATCTGCTAAGCCAGAGGCGGAAATCAAAGGTGGATCCTCAGAAGAGAAAAAGGAAGCAGCTAGCACATGA MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDKVNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGLGDMDLGGMDFSKFGDMGGMGGLGGMGGMGGMGGMGGLGDMDMGGMGDDNEFDGSDDDEQEVSKPEKSGDKAESAKPEAEIKGGSSEEKKEAAST Homology
BLAST of Csor.00g266300 vs. ExPASy Swiss-Prot
Match: P0C8Z0 (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.0e-63 Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy Swiss-Prot
Match: Q6YYB0 (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0359500 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.7e-63 Identity = 136/218 (62.39%), Postives = 168/218 (77.06%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy Swiss-Prot
Match: Q8L7U4 (Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55 Identity = 138/243 (56.79%), Postives = 158/243 (65.02%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy Swiss-Prot
Match: Q9FR62 (Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.7e-32 Identity = 81/178 (45.51%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy Swiss-Prot
Match: Q6ID70 (Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.7e-29 Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of Csor.00g266300 vs. NCBI nr
Match: KAG6575836.1 (hypothetical protein SDJN03_26475, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 410 bits (1055), Expect = 2.89e-144 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Csor.00g266300 vs. NCBI nr
Match: XP_022954134.1 (uncharacterized protein OsI_027940 isoform X1 [Cucurbita moschata]) HSP 1 Score: 394 bits (1011), Expect = 1.42e-137 Identity = 207/212 (97.64%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Csor.00g266300 vs. NCBI nr
Match: XP_023548508.1 (uncharacterized protein OsI_027940-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393 bits (1010), Expect = 2.25e-137 Identity = 207/212 (97.64%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g266300 vs. NCBI nr
Match: XP_022991667.1 (uncharacterized protein OsI_027940 isoform X2 [Cucurbita maxima]) HSP 1 Score: 370 bits (951), Expect = 1.98e-128 Identity = 196/212 (92.45%), Postives = 202/212 (95.28%), Query Frame = 0
BLAST of Csor.00g266300 vs. NCBI nr
Match: XP_022991666.1 (uncharacterized protein OsI_027940 isoform X1 [Cucurbita maxima]) HSP 1 Score: 365 bits (936), Expect = 4.42e-126 Identity = 196/216 (90.74%), Postives = 202/216 (93.52%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy TrEMBL
Match: A0A6J1GS15 (uncharacterized protein OsI_027940 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456489 PE=4 SV=1) HSP 1 Score: 394 bits (1011), Expect = 6.88e-138 Identity = 207/212 (97.64%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy TrEMBL
Match: A0A6J1JMH0 (uncharacterized protein OsI_027940 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488213 PE=4 SV=1) HSP 1 Score: 370 bits (951), Expect = 9.61e-129 Identity = 196/212 (92.45%), Postives = 202/212 (95.28%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy TrEMBL
Match: A0A6J1JRE0 (uncharacterized protein OsI_027940 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488213 PE=4 SV=1) HSP 1 Score: 365 bits (936), Expect = 2.14e-126 Identity = 196/216 (90.74%), Postives = 202/216 (93.52%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy TrEMBL
Match: A0A0A0K620 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G396430 PE=4 SV=1) HSP 1 Score: 350 bits (899), Expect = 6.75e-121 Identity = 192/219 (87.67%), Postives = 198/219 (90.41%), Query Frame = 0
BLAST of Csor.00g266300 vs. ExPASy TrEMBL
Match: A0A1S3BRT4 (uncharacterized protein OsI_027940 OS=Cucumis melo OX=3656 GN=LOC103492824 PE=4 SV=1) HSP 1 Score: 343 bits (881), Expect = 3.02e-118 Identity = 185/217 (85.25%), Postives = 191/217 (88.02%), Query Frame = 0
BLAST of Csor.00g266300 vs. TAIR 10
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 217.6 bits (553), Expect = 9.6e-57 Identity = 138/243 (56.79%), Postives = 158/243 (65.02%), Query Frame = 0
BLAST of Csor.00g266300 vs. TAIR 10
Match: AT4G02450.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 215.7 bits (548), Expect = 3.6e-56 Identity = 138/243 (56.79%), Postives = 157/243 (64.61%), Query Frame = 0
BLAST of Csor.00g266300 vs. TAIR 10
Match: AT3G03773.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30 Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of Csor.00g266300 vs. TAIR 10
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29 Identity = 57/114 (50.00%), Postives = 81/114 (71.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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