Csor.00g264950 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g264950
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 8338032 .. 8338996 (+)
RNA-Seq ExpressionCsor.00g264950
SyntenyCsor.00g264950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGGGAGAAACAGAATGTGAAATGGAAGCGTACATAAAAGGATGGGGTTGTGGAGATTTTGGAGCACTGCATTGGGGTTGAGGAATTCCTTCTTCTTTTATACTCGTCAAAGGGGAGCGGGAGGGTCCTCTTTCTGAATTTTGCCGGTGACCCAACTGCTTTCTCTCGCGCTCCCATTCTCGTGTTCGTCTCCCAGGATGCCTTAAACACTGTGTGTTCACGGTTAGTTCTCGCTTTAATTCCCCTTTTCTCTCGTTTTATTTTTATTTTTTTGTTTTTGTATGCTTATTTTGTGCTTAGATGGGAGAGTGGTTTGTTTTTCTGTTTCATTGTCTGGAAAATGAATAGATCGAGCAATGTTCAGTGATTCAGTTCAGTTTTCTTTACTTTTTCTTCGATCCCCCTATGTGTGAATTATTTCAATCTGTACAATATGACCAAAATCCTTAAACATTCGTGGAACAGGGCATCGTTTTAGAGTTCAAATGGAATTTTCTTCTTCACATTTTCTTATCTTTTTTATTTTTTTGGTTTCAGACCATTCTGGTAATCCAATTGCAAAGGGGCGATGGATTATTAGGTTTGTTAATATCACTCAACAATCTGTCTCTTGATTTTCAGTACATGATTCATAAATTCAAACTTTTCTGCAGGTTGTGATGGATTCCAGAAAATTGGGTGGAAGTCGGCATGCATTTATTATGATGTTTTAAAACTTAATCTGACCTTAATGGTAAGAAAACTTAATAATTACCCTAACCTTATTGTTCTTGCTGCGTGGTTGTTCAATGTATAATTGTTTTAAGTTTATAAATGCTGTTCTGTTGTTGATTTTGATCATTAGTAGTTGAATCTCAATGCACTTTCTTGGAAATGAGAAACAGAGTGATTCCTGATGTTTCCAGGGAAGGCAGATCCTTAGGGAAAACCGTGACGATTTTCCTTTCATTGCCATGTAA

mRNA sequence

ATGGATGAGGGAGAAACAGAATGTGAAATGGAAGCGTACATAAAAGGATGGGGTTGTGGAGATTTTGGAGCACTGCATTGGGGATGCCTTAAACACTGTGTGTTCACGACCATTCTGGTAATCCAATTGCAAAGGGGCGATGGATTATTAGGTTGTGATGGATTCCAGAAAATTGGGTGGAAGTCGGCATGCATTTATTATGATGTTTTAAAACTTAATCTGACCTTAATGGGAAGGCAGATCCTTAGGGAAAACCGTGACGATTTTCCTTTCATTGCCATGTAA

Coding sequence (CDS)

ATGGATGAGGGAGAAACAGAATGTGAAATGGAAGCGTACATAAAAGGATGGGGTTGTGGAGATTTTGGAGCACTGCATTGGGGATGCCTTAAACACTGTGTGTTCACGACCATTCTGGTAATCCAATTGCAAAGGGGCGATGGATTATTAGGTTGTGATGGATTCCAGAAAATTGGGTGGAAGTCGGCATGCATTTATTATGATGTTTTAAAACTTAATCTGACCTTAATGGGAAGGCAGATCCTTAGGGAAAACCGTGACGATTTTCCTTTCATTGCCATGTAA

Protein sequence

MDEGETECEMEAYIKGWGCGDFGALHWGCLKHCVFTTILVIQLQRGDGLLGCDGFQKIGWKSACIYYDVLKLNLTLMGRQILRENRDDFPFIAM
Homology
[Close]
BLAST of Csor.00g264950 vs. NCBI nr
Match: KAG6604294.1 (hypothetical protein SDJN03_04903, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (544), Expect = 2.97e-70
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MDEGETECEMEAYIKGWGCGDFGALHWGCLKHCVFTTILVIQLQRGDGLLGCDGFQKIGW 60
          MDEGETECEMEAYIKGWGCGDFGALHWGCLKHCVFTTILVIQLQRGDGLLGCDGFQKIGW
Sbjct: 1  MDEGETECEMEAYIKGWGCGDFGALHWGCLKHCVFTTILVIQLQRGDGLLGCDGFQKIGW 60

Query: 61 KSACIYYDVLKLNLTLMGRQILRENRDDFPFIAM 94
          KSACIYYDVLKLNLTLMGRQILRENRDDFPFIAM
Sbjct: 61 KSACIYYDVLKLNLTLMGRQILRENRDDFPFIAM 94

[Close]
BLAST of Csor.00g264950 vs. NCBI nr
Match: KAE8649662.1 (hypothetical protein Csa_012315 [Cucumis sativus])

HSP 1 Score: 48.1 bits (113), Expect = 2.11e-04
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 0 

Query: 51  GCDGFQKIGWKSACIYY----------DVLKLNLTLMGR 79
           GCDGFQK GWKSAC+            D+L+LNLTLMG+
Sbjct: 86  GCDGFQKNGWKSACVCCKSCMKYKAASDILQLNLTLMGK 124

The following BLAST results are available for this feature:
BLAST of Csor.00g264950 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g264950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604294.12.97e-70100.00hypothetical protein SDJN03_04903, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8649662.12.11e-0456.41hypothetical protein Csa_012315 [Cucumis sativus][more]
BLAST of Csor.00g264950 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g264950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g264950.m01Csor.00g264950.m01mRNA