Csor.00g263960 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGGTGGGATTACGATTCCTTGCGCGCAGGATCATTTTCTCGGTTTAACTTCTCGATTGAACACACCCATAAGCTGAAACTGATCAGAAATGAGAACCCATTTGCCTCCAAAATGGTAGAACACTGTAAATTAATCGATGATATTCTTATATTTGTGTTTTTTATAAATGAGTTTCTCCAACTGTAGGGGAAATCATTGATGTATTCTTTTTATTATTGATTCAAAGTAAGTTTTGAAAATCCTCCTCCGTTTAATTCAATGTCTGAATCAAATGATAATTTATGAACCGTCGCCATGTTATCAGTCTCTTTTTGTTCATCTTCAAACGCCATGTTTGCATCTCACACCGTTTGACGTTTAGAAAACTGAACAGAGTAGAAATTTTGGTTTCGTTAATATAAACCATCTGCTGTTCTTCACGGGCTGTGAAGTTTTGATTCTGTGTTGCAAATTAGAAAGCTGTTTGAGTGATTCTCTGATGATGGGTTCTTTTATATCAAGAACTCTTCTGTATGTAAACACTCACTTCTTTGGTTGTTCTTTCTTTCTGGTTTTCTTCCCCTGTTTTTTCTCCTGATGAAGGCTTGAATTTCTGTTTGAATCTGATAGAATGGCATTTGGGTATGTTTATCCTGCTTATGAATGCTACAAGATTGTGGAGAGGAGCCCATTAGAGATACTCCAGCTTTTGTTTTGGTGCCATTTTTGGTCTGTAATGGATGCCCTGTTCTAGCATCTTGCTGTTTAATTTGATTCAACTAATAGCAGTGTTCAATGCTTTCTTTTCAATGTTTGTAGGATCATAGTTGCTTTGCTTACAGTGTTGGAGAAAGTGGGAGACCCTTTGATTTCATGGTATGCAAATGTCACTCATTATCTGAACTATATAACGAAATAGAAGTGTTTATAGGCTTAATTTTCAAAAAACGGTAGGGTTGGTTATCAAACACGGGATAAGTTTTCAACTTCTGTTTTGTTTTCGATGTTTGAGAGAGTGAGAAACTTGGGTTTCGGGGGGCTCCTCTAACTTTGGGAGGCTTTGTCCACCCGAACCGAACAACAAGGTTTTTAAGTTATTAAGTTCTCAACTCGAACATGTTCTAAACCCGAGCATAAGGGTATCTTTGGGGAAATTCTTATGTAGTTTCATCATGGTAACTGGGCTTTCTATGTTGTGAAGGTTGCCGCTGTACAATGAAGCAAAGCTGGCATTCTTCGTATATCTTTGGCATCCTAAAACAAAAGTATGCATTCAACATCTTAAAGAAGCCTCTTTATTCATTCCATCAGATTATATCTAACTGAGGTTTGTTTTCAGGGAGCAGCAAGTATGTTCGACTTCGTTCTTCGACCATTCATAGCGAAACACGAAGCGAAAATCGATCATTACCTGGTCGAACTAAGTCTCAAGACAGCCGATATCACAACCTTGTTTTGGCATAAAACAACAAGTTGCAGCGAAACGACGTTACTCGACTTGCTGCATAATGTTTCGTCTCTGCCTACGTCACAGACTCGTCGTAATCAGGTACTCAAAGCTTCTCCAAAACTCTTGGACATGGAAAGAACTTGTCCTTGAAATATGTTTGTTCTGGCAGAATCTCAAGGATGAAACTGAATTGGCAGCAGCAGAGGCAACAGAACCTGTATCAGCTATGGAAAATAGAGTTGCAGATGACTCGAACAACAAGGTAAGTTTTAATGAACTATCATCGAAACCGAAACGTCGAAAACGGCGATTTTCGAGCTTGTTTTGTGCCAAGTGA ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGAAATGAGAACCCATTTGCCTCCAAAATGGATCATAGTTGCTTTGCTTACAGTGTTGGAGAAAGTGGGAGACCCTTTGATTTCATGGTTGCCGCTGTACAATGAAGCAAAGCTGGCATTCTTCGTATATCTTTGGCATCCTAAAACAAAAGGAGCAGCAAGTATGTTCGACTTCGTTCTTCGACCATTCATAGCGAAACACGAAGCGAAAATCGATCATTACCTGGTCGAACTAAGTCTCAAGACAGCCGATATCACAACCTTGTTTTGGCATAAAACAACAAGTTGCAGCGAAACGACGTTACTCGACTTGCTGCATAATGTTTCGTCTCTGCCTACGTCACAGACTCGTCGTAATCAGAATCTCAAGGATGAAACTGAATTGGCAGCAGCAGAGGCAACAGAACCTGTATCAGCTATGGAAAATAGAGTTGCAGATGACTCGAACAACAAGGTAAGTTTTAATGAACTATCATCGAAACCGAAACGTCGAAAACGGCGATTTTCGAGCTTGTTTTGTGCCAAGTGA ATGGGTATTCGTCTACCGGAGATCATTCTTCACGCCAAGCAAATTACTCACCGGCAAATTGGGTTTGAAGTGATGAAGCACCGACCGGCGTCATCGGACGTTCCGAAAGGCCATTTCGTGGTCTATGTTGGGGAGGACGAAGAAGAAAGGAAGCGATTCGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAACTGTTGAGTAAGGCTGCTGAAGAGTTTGGATTTGAACATCAGTTTGAAATGAGAACCCATTTGCCTCCAAAATGGATCATAGTTGCTTTGCTTACAGTGTTGGAGAAAGTGGGAGACCCTTTGATTTCATGGTTGCCGCTGTACAATGAAGCAAAGCTGGCATTCTTCGTATATCTTTGGCATCCTAAAACAAAAGGAGCAGCAAGTATGTTCGACTTCGTTCTTCGACCATTCATAGCGAAACACGAAGCGAAAATCGATCATTACCTGGTCGAACTAAGTCTCAAGACAGCCGATATCACAACCTTGTTTTGGCATAAAACAACAAGTTGCAGCGAAACGACGTTACTCGACTTGCTGCATAATGTTTCGTCTCTGCCTACGTCACAGACTCGTCGTAATCAGAATCTCAAGGATGAAACTGAATTGGCAGCAGCAGAGGCAACAGAACCTGTATCAGCTATGGAAAATAGAGTTGCAGATGACTCGAACAACAAGGTAAGTTTTAATGAACTATCATCGAAACCGAAACGTCGAAAACGGCGATTTTCGAGCTTGTTTTGTGCCAAGTGA MGIRLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEEERKRFVVPLSYLKNPLFQELLSKAAEEFGFEHQFEMRTHLPPKWIIVALLTVLEKVGDPLISWLPLYNEAKLAFFVYLWHPKTKGAASMFDFVLRPFIAKHEAKIDHYLVELSLKTADITTLFWHKTTSCSETTLLDLLHNVSSLPTSQTRRNQNLKDETELAAAEATEPVSAMENRVADDSNNKVSFNELSSKPKRRKRRFSSLFCAK Homology
BLAST of Csor.00g263960 vs. ExPASy Swiss-Prot
Match: Q8LE10 (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24 Identity = 58/158 (36.71%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy Swiss-Prot
Match: Q8LEM6 (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 4.3e-24 Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy Swiss-Prot
Match: Q9LR09 (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 3.6e-23 Identity = 54/136 (39.71%), Postives = 83/136 (61.03%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy Swiss-Prot
Match: Q8GXE9 (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 9.3e-19 Identity = 40/93 (43.01%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of Csor.00g263960 vs. NCBI nr
Match: KAG6588989.1 (HVA22-like protein i, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 510 bits (1313), Expect = 3.65e-182 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. NCBI nr
Match: XP_022928471.1 (HVA22-like protein i isoform X2 [Cucurbita moschata]) HSP 1 Score: 340 bits (873), Expect = 2.08e-116 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. NCBI nr
Match: XP_022928470.1 (putative HVA22-like protein g isoform X1 [Cucurbita moschata]) HSP 1 Score: 324 bits (830), Expect = 1.70e-109 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. NCBI nr
Match: KAG7015256.1 (HVA22-like protein i, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 324 bits (830), Expect = 2.33e-109 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. NCBI nr
Match: XP_023529792.1 (HVA22-like protein i isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312 bits (799), Expect = 4.27e-105 Identity = 163/178 (91.57%), Postives = 167/178 (93.82%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy TrEMBL
Match: A0A6J1EKD4 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435268 PE=3 SV=1) HSP 1 Score: 340 bits (873), Expect = 1.01e-116 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy TrEMBL
Match: A0A6J1ERR6 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435268 PE=3 SV=1) HSP 1 Score: 324 bits (830), Expect = 8.23e-110 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy TrEMBL
Match: A0A5A7U3A0 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00950 PE=3 SV=1) HSP 1 Score: 314 bits (804), Expect = 1.69e-104 Identity = 180/287 (62.72%), Postives = 199/287 (69.34%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy TrEMBL
Match: A0A6J1JPK6 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486592 PE=3 SV=1) HSP 1 Score: 304 bits (778), Expect = 6.96e-102 Identity = 156/167 (93.41%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of Csor.00g263960 vs. ExPASy TrEMBL
Match: A0A6J1C2L3 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111007692 PE=3 SV=1) HSP 1 Score: 235 bits (600), Expect = 3.33e-74 Identity = 129/196 (65.82%), Postives = 144/196 (73.47%), Query Frame = 0
BLAST of Csor.00g263960 vs. TAIR 10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25 Identity = 58/158 (36.71%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Csor.00g263960 vs. TAIR 10
Match: AT5G42560.2 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25 Identity = 58/158 (36.71%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Csor.00g263960 vs. TAIR 10
Match: AT5G42560.3 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25 Identity = 58/158 (36.71%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of Csor.00g263960 vs. TAIR 10
Match: AT1G19950.1 (HVA22-like protein H (ATHVA22H) ) HSP 1 Score: 113.2 bits (282), Expect = 3.0e-25 Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of Csor.00g263960 vs. TAIR 10
Match: AT1G75700.1 (HVA22-like protein G ) HSP 1 Score: 110.2 bits (274), Expect = 2.6e-24 Identity = 54/136 (39.71%), Postives = 83/136 (61.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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