Csor.00g263840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g263840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	HMA domain-containing protein
Location	Csor_Chr11: 12906478 .. 12909276 (+)
RNA-Seq Expression	Csor.00g263840
Synteny	Csor.00g263840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCATTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACAGCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGTCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGTATATACCAATTTTTTGTGTTTATATGCGTGTTTTGCTGATAGCAGTCGGTGAAAAAAGGGTTCCGAATTTGGTGAAGATTGCGAGCGCATGTTGATTTGGAAATCGCCCAATTTCTGGCCCTGTACCTAAGTAGTCAGATTAATTTTCAAGTTAAATTATGAACTTCACTATGTGTTCATCTTCAAAAGTAAATTTGGAAATCGCCCATGAACCAACCAATAAATCATACAAGAGTTAACTAACAAAACACTCACAATCATATCAAAGAAATGCCCAAGCATAATCACAAAAACACTCTAACCTAGTGCACAAGCTTGTTGAGGATTGTTGGAAGAGGAGTCCCACGTCGGTTAATTAAGGGGTTGATTATGAGTTTATAAGTAAAGAATACATCTCCATTGGTATGAGACCTCTATTGGTATGAGACCTTTTGGGGAAACCAAAAGCAAACTCAAGAGACTTTATGCTCAAAGTGGACAATATCATTACGAAGGATCGTGTCCTAACCAAGCTTAGCAACAAAATGCCCAATCTTCCTGATTTAAATCATCCAACAAGATTAGAATAACTAATACTTGAAAAACAGTCTAATCCATCTACAAGAATGAGTATAGATAGTTACATATCTTTTTTAAAATTTGGAAACTTAGCTAAAGTGGGTATTAAATGGACTAGTTATTTCAAGTATAGGGTTCAAAAAGTTCAAGGACTTGTTCACTTAATGGCAAAAATTGAATTTCCCTTAATTCTTAAAGATTTAAGTTGTTTATGAACTGTGCCCATTCTAGGATTTGCAGCATTAAAACTTTGAATTGCTTGAGGCTTCTCTAATGGTTAACTTTCGTTTCTGAAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGGTACATTGTCTTATCATCCTAACACCTTCTATGTCTTGTTGCTTGGTTTTTGTTAGTCGAATGGCTTTGAAACGTAGTTTTTTCTTTTCCTTTTTTTAACAATGGATGAGCTGCTTTCTGTTGATGAGTCTACAACTTCGCTTAGACCGAAATAAGATCATGGTGCTCTCAATTTTTGATGACTTCCGAAATGAGATTTGCTCTTCCTTTATCTCTACGAATTTGTTGAAGCTTATAATTGTAGGAGCGAGTTTGAGATACAGTTTTGAGAGTAGAGCTTTGTAACAGCCCAAGCTTACCACTAGCAGATATTGTCCTCTTTGGACTTTCTCTTTCGGGCTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAAAATGATTTGTTCTCTTCCTCAACTGATGTGGGATCTCATAATCCACCCCCCCTTTGGGGGCCAGCATCCCCGCTAGCACTCATTCCCTTCTCCAATTAATGTCGGACCCCCCAATCTACCCCCTTCGGATCCCAGCGTCCTTGCTGGCACACCGCCTCGTGTCCACTCCCCTTCGGGCCTTAGCCTCCTCGCTAGTACATTGTCTGGTGTCTAGTTCTGATACCATTTGTAACGGTCCAAGCCCACTGCTAGGAGATATTGTCCTCTTTGGGCTTTCCCTTCCCTCAAGGTTTTTAAAACGCGGGAAAGGTTTCCACACCCTTTATAAAGAATGTTTCGTTCTCCTCGTTGGCACTCGTTTCTCTCTCCAATCGATGTGACATCTCACATTTTAGTTGATCAACTTTTTTCTACAAGTACCTGAGTGTTTCCTCCCAAAGCATTTGTGATCTTAGGATTTTTAAAATTGCTTTTTGACTATGTGACCAAACACCTAAGTTTGGAAAATGGGCTTTTATTAGTTAAAAGCACTTTTCATCGTTCTAAAAGCGGTACCAAACTCACTCTTAATGGATTACATTTGGTGCTTTGGTAGTACGGTACTTTATTTTACCCGACTCTTCTTATATCTCTGCCCATTCAATCAGCTCATCAAGTTAGATATTGCTATGCTATGCGTGTATATCTTTGTGTGTTCACTTCTTCGATGATATATCGAAAGCATTGAAATTTAGTATTATGTGCTGAAGCGAAAGGGAAGTGTTAAGTTAACTACAAAGTTCTAGTTCTTTTGAAGATCTTGAAGTATGCTAAGAGAGCACAAATGATGTATTAGCTTCTTTTCGAATTCAAGTTTAGTTATTGTTTGAAGTAAAATTGAAGTCTAAAATTTCATATTCTTACATGTTCTTCTGCAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGGTTTGTATGATCTTAGTTGTTAGCAACCGACCCGTATTCTACCAACTCGCCTAAACGTTTTTTCTTCTTCTCCTCTTGTTCTAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAACGAAGAAGTTTTTGTTTAG

mRNA sequence

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCATTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACAGCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGTCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAACGAAGAAGTTTTTGTTTAG

Coding sequence (CDS)

ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCATTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACAGCTCCTCCAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGTCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAGAGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATCGACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAACGAAGAAGTTTTTGTTTAG

Protein sequence

MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

Homology

[Close]

BLAST of Csor.00g263840 vs. NCBI nr
Match: KAG6588977.1 (hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330 bits (845), Expect = 2.26e-113
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL
Sbjct: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. NCBI nr
Match: KAG7015253.1 (hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (842), Expect = 6.47e-113
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHSISRPATANPTPFPIFRSSISLH+SSNFAVSAASFRHSAVYGHRQSRGL
Sbjct: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. NCBI nr
Match: XP_022928515.1 (uncharacterized protein LOC111435303 [Cucurbita moschata])

HSP 1 Score: 328 bits (841), Expect = 9.19e-113
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHS+SRPATANPTPFPIFRSSISLH+SSNFAVSAASFRHSAVYGHRQSRGL
Sbjct: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. NCBI nr
Match: XP_023529800.1 (uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319 bits (818), Expect = 2.95e-109
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHSISRPATANPTPFP+FRSSISLH+S+NFA SAASFRHSAVYGHRQ RGL
Sbjct: 1   MASISTFPIFHSISRPATANPTPFPVFRSSISLHTSTNFAASAASFRHSAVYGHRQPRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           K RRAVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  KNRRAVEGEASVPEQEVEGEEPPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. NCBI nr
Match: XP_022989147.1 (uncharacterized protein LOC111486304 [Cucurbita maxima])

HSP 1 Score: 315 bits (808), Expect = 9.85e-108
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHSISRPATANPTPFP+FRSSISLH+S+NFA +AA+FRHSAVYGHRQ RGL
Sbjct: 1   MASISTFPIFHSISRPATANPTPFPVFRSSISLHTSTNFAAAAAAFRHSAVYGHRQPRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           +KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  RKRMAVEGEASVPEQEVEGEEPPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL
Match: A0A6J1ERV9 (uncharacterized protein LOC111435303 OS=Cucurbita moschata OX=3662 GN=LOC111435303 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 4.45e-113
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHS+SRPATANPTPFPIFRSSISLH+SSNFAVSAASFRHSAVYGHRQSRGL
Sbjct: 1   MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL
Match: A0A6J1JF03 (uncharacterized protein LOC111486304 OS=Cucurbita maxima OX=3661 GN=LOC111486304 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 4.77e-108
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTFPIFHSISRPATANPTPFP+FRSSISLH+S+NFA +AA+FRHSAVYGHRQ RGL
Sbjct: 1   MASISTFPIFHSISRPATANPTPFPVFRSSISLHTSTNFAAAAAAFRHSAVYGHRQPRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120
           +KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT
Sbjct: 61  RKRMAVEGEASVPEQEVEGEEPPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEALEQT 120

Query: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180
           EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Sbjct: 121 EGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV 180

[Close]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL
Match: A0A6J1F3X5 (uncharacterized protein LOC111441946 OS=Cucurbita moschata OX=3662 GN=LOC111441946 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 4.69e-77
Identity = 140/187 (74.87%), Postives = 152/187 (81.28%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASIS FP  HS+SRPA ANP+P  I R S +L SSS+F VSAASF HSAV G  + RGL
Sbjct: 1   MASISLFPALHSVSRPAIANPSP--ISRPSFALPSSSSFTVSAASFGHSAVKGRSRLRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSV 120
           K+ R VE +AS+PEQ VEGE       E PAVTV VS SD+LTMFFQAEGTLNESA+PSV
Sbjct: 61  KQVRVVEEDASIPEQGVEGEALSPSPSEQPAVTVPVSSSDILTMFFQAEGTLNESAVPSV 120

Query: 121 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 180
           TEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFE
Sbjct: 121 TEALEQTDGITGLKVQLVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFE 180

[Close]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL
Match: A0A6J1J0J2 (uncharacterized protein LOC111482359 OS=Cucurbita maxima OX=3661 GN=LOC111482359 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 7.73e-76
Identity = 138/187 (73.80%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASIS FP  HS+SRPA ANP+P  IFR S +L SSS+F VSAA+FRHSA  G  + RGL
Sbjct: 1   MASISLFPALHSVSRPAIANPSP--IFRPSFALPSSSSFIVSAAAFRHSAGKGRSRPRGL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSV 120
           K+ R VE +AS+PEQ  EGE       E PAVTV VS SD+LTMFFQAEGTLNESA+PSV
Sbjct: 61  KQVRVVEEDASIPEQGGEGEAPSPSPSEQPAVTVPVSSSDILTMFFQAEGTLNESAVPSV 120

Query: 121 TEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFE 180
           TEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSFE
Sbjct: 121 TEALEQTDGITGLKVQLVEGIASVELTKQTTIQSTGVASSLIEIIQGAGFKLQTLNLSFE 180

[Close]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL
Match: A0A6J1D9Q3 (uncharacterized protein LOC111018338 OS=Momordica charantia OX=3673 GN=LOC111018338 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.20e-69
Identity = 134/184 (72.83%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSAASFRHSAVYGHRQSRGL 60
           MASISTF   HSISRP  ANP    I   SISL +S N + +AASFR+S V G R+ R L
Sbjct: 1   MASISTFSALHSISRPRPANPAL--ISTPSISLPTS-NLSFAAASFRNSPVQGERRRRRL 60

Query: 61  KKRRAVEGEASVPEQEVEGE-----ETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTE 120
           K+  AVE +A++PEQEVEGE     E PAVTV VSPSD+LTMFFQAEGTLNE+AIPSVTE
Sbjct: 61  KRATAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMFFQAEGTLNETAIPSVTE 120

Query: 121 ALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDN 179
           ALEQTEG T LKV+VVEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSF+D 
Sbjct: 121 ALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDK 180

[Close]

BLAST of Csor.00g263840 vs. TAIR 10
Match: AT5G14910.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33
Identity = 96/184 (52.17%), Postives = 126/184 (68.48%), Query Frame = 0


Query: 1   MASISTFPIFHSISRPATANPTPFPIFRSSISLHSSSNFAVSA-ASFRHSAVYGH-RQSR 60
           MASI+    FHS  R  + N +   +    + L  + NF   A  + R+ +  G  +Q+R
Sbjct: 1   MASIAASSTFHSFCRTKSPNLSSTHL----LPLSKNLNFRTRAIGNSRNCSFAGFIKQNR 60

Query: 61  -GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAIPSVTEA 120
            GL+K  ++ EG   V   E + +ET  V+V VSPSDMLTMFFQA+GTLNE+AIP+VT A
Sbjct: 61  LGLRKLSSIGEGGEGVAVAEEQPQET--VSVPVSPSDMLTMFFQADGTLNEAAIPNVTRA 120

Query: 121 LEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNE 180
           L+  +G + LKVQV EG+A VEL KQ T+Q+TGVAS+L+ETIQ AGFKLQTLNLSFED++
Sbjct: 121 LQDIDGVSNLKVQVSEGVAVVELLKQTTVQATGVASNLVETIQGAGFKLQTLNLSFEDDD 178

The following BLAST results are available for this feature:

BLAST of Csor.00g263840 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g263840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588977.1	2.26e-113	100.00	hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015253.1	6.47e-113	99.44	hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928515.1	9.19e-113	98.89	uncharacterized protein LOC111435303 [Cucurbita moschata]	[more]
XP_023529800.1	2.95e-109	96.11	uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]	[more]
XP_022989147.1	9.85e-108	94.44	uncharacterized protein LOC111486304 [Cucurbita maxima]	[more]

BLAST of Csor.00g263840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERV9	4.45e-113	98.89	uncharacterized protein LOC111435303 OS=Cucurbita moschata OX=3662 GN=LOC1114353...	[more]
A0A6J1JF03	4.77e-108	94.44	uncharacterized protein LOC111486304 OS=Cucurbita maxima OX=3661 GN=LOC111486304...	[more]
A0A6J1F3X5	4.69e-77	74.87	uncharacterized protein LOC111441946 OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1J0J2	7.73e-76	73.80	uncharacterized protein LOC111482359 OS=Cucurbita maxima OX=3661 GN=LOC111482359...	[more]
A0A6J1D9Q3	1.20e-69	72.83	uncharacterized protein LOC111018338 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Csor.00g263840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14910.1	6.2e-33	52.17	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 98..169 e-value: 5.4E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..84
None	No IPR available	PANTHER	PTHR35756	OS05G0337400 PROTEIN	coord: 1..178
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 96..167 score: 8.836551

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g263840.m01	Csor.00g263840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding