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Csor.00g263350 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCATGGAATTCAGTTCCTATGGAGATCATCTACCAGCTATTAGGATGGAGTGCTATCATATGCTGGGCGCTCGCCTCATATCCGCAGATCATTCTGAATTTCTGGCGAAAAAGGTACGAAATCAGGTCTTGTTAATCGACGATTCCGGCGCCAGCGTCGGAATCGCCGTCGTTGTCTTCTTCGGCGGAGAGGTTATTGAGGACTGATGTTTGGATTCTGGTTTGGTAGTGTTGTAGGATTGAGCTTTGATTTTGTGATGCTGAATTTCACGAAGCAATCGTCGTATTTGATTTACAACGCGAGTCTGTTCTTCAGCGCTACTGTTCAGAGGCAGTACTTCGAGAAATACGGCTTCGATCAGGTTTTCTTCTTCTTCTTCTTCAGTTCTTCGAATTTTAGTTTCTATAATGGACGATTCATTCGTAATTCTTGATCTAGAACTATATCGTTGCTATGAACTACCAACTTCGAACTATCTACTAATTTAGGGAATAATTATGGTTTATAATCGAGAAATTATGGATTTATAACCAAGCAATACTCTCTCCATTGATATAGAGCTTTGTGGGAAGTCTAAAGCAAAATAGAGCTTATACTAAAAGTGGACAGGAATGGTACATTGATAATTTAAAATATTAATTTTAAATTTAAAAAAAAAATCTAAAAATTACTTTTAAATTTTCAAGAGAATATTAAAAAGTTGGAAAATAATTTATGAAATGCTAATAGTTTTCATAGCTTTGTTTTGGACTTCTCGAACAAAATACACCTTTTGACTACACCTTTGAGTCTCACAATTCTTTGTTCGATATTTGAGAATTCTATTAACATGGCTAAGTTTAGGGCATGACTTTGATACCATGTTAGGAATCACGACTCTTCACAATGGTATGATATTGTCCACTTTGAGTGTAAGCTCTCGTGGCTTTTGCTTTGGGCTTCTCTAAAATGCATCATATCAATAGAGATAGCATTCCTCGCTTATAAACTAATCATTCTTTAAATTAGCCAATGTGGGACTCATTCCCAATAATTCTCAACAAATAGACTGTATCCATAGGTTGACAGTAAGATTTTTTTTAATTTTTTTATTAAATTTAAAGGTGTTAATGTTAGTTTAAAATTTTCACCTGTCTTTTTTAAACCATATGATAAGATAAGGAATCAATACAAGGGAATAAGATTCGGATTACCTTGTTGATCGAATATCTCAAGACAAGAACATTGTTTGAGATTCAAATCACTCCACAAGCAAGATCGATCATGTGTAGCTTGAATGATTCTTGTTGATCAAATATCTCAACGCAAGAACACTTGTTTGAGATTCGAATCACTCCAGAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTCCATGCAACCTAAACTACGTAGAATTGCAAAGAAACTTAGCCATTAGCTAAAAGAAAAAGCACAAAGGCTTCTTTTTACTATATTTTCCAAGTCCCTTCACAAATACAACCTAAGTGGCCCTCAAAATGAACTATTAAAGACATACCAAAAGTTGTAACATTCATACTTAATGACCATAATTAGCCATCATGTAAATGTAACTAAAATAAATGAAAAGTCTTAAAATACAATAACTCTAAATTACTCCAAATTGTAACCCACCCAAAATTTACGATAATCAAACTTCATTCTTCAATTGAAACATATTTCGATAATTTTGACAACCTTTTCTTCACATCTTCATTGAAGTATATCGTATGATTAATGTCTCTTGATTCATATCACCATACTAAAAATTATTTATGAAATAAAATATTATCCGTTTCTATTTAAAAATTAACACTATTTTTTATTTTTATTTTTATTTATTATTATTATTATTATTTTTGAATGTTTAAGACAAAATACAAATTACTTTTATTAATCTAAATTAAGACTTGTCCCACCTATACTAATAAACCCGTAGTTTGTAGAGATTTGCTGCTCTTATTTTGACTTAGACTTCTGCAAATCTGTGTTGATTTTTCGAGAAATTTTAGCATGATAGCAATGTGTAATCGAAGAATAATAGTCCTAATCTTATGAATCTGAACAGTTTTCATTGATTGCTGCAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAAGTCAGTGGTTTATTCTCTTTGTGTTTGATCCTGTTTTGGTTTGATTTGGGTTACCATTCGCATTCTATTGATTGAATTTTGGTGCAGTGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTTGTCTCCATGTTCAAGTAACCATTTCTTCATCTCTTAAAATTTTGTGGAGTTATATTTTGATTGATTTGCTAATAATTCAGCAAGGTTGATTGGCAATGTGTTGCAGTTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGTTAGGCTAAACTATACAGTTAATTCTCTTTATTCGTCTTTTTGTTCTTAGTCTTTTTTATGATTCAACTTATCATCTGAACAAATTCACAATTCATATGTGTTCATCATAGCTTTTTAATTAATTTTTTTCATGAGTTCTTCGATTTTGGTCCACTTTCTACAATTTCAGTAACAACCAATGCACTAATGTATTAAAAAGTAGTAGCACAAGGCTAAAAGTTTTATGGGATGGCTACAAAAACTCACCGCTAGTAGATATTGTCCGCTTGGCCCGTTACGTATCGCCGTTAGCCTTAACGGTTTTAAAATGTGTCTGCTAGGGAGAGGTTTCCTCACCCTTATAACGAATGCTTTGTTCCCCTCTTCAATAGATGTAGGATCTCACAATCCACTCCTTGGGAGCCCAGTGTCCTCGCTGGCACACCGTCCGGTGTCTGGCTCTGATACCATTTGTAACAACCCAAACCCACTGCTAGCAAATATTGTCTATTTTGGCCCATTACACATCGCTGTCAGCGTCACGATTTTAAAACGCTTCTACTAGGAAAAGGTTTCCATATCCTTAGAAAGAATACTTCGTTCCACTCTCCAACCGATGTGGAATCTCACAATCCACCCCCCTTGGGAGCTCAGCGTTCTTGCTGGCACACCGCCCGGTGACTATCTTCAATACCATTTATAACAGTCCAAACCCAATGATAGTAAATATTGTCCGCTTTGGCCCCTTACGTATTGCCATCAGCCTCATGATTTTAAAACGCGTCTACTAGGAAGAGGTTTCCACATCCAAATTCTTCGTTACCCTCTTCAACCGATGTGGGATCTCACAAGAAACAAATTTCTCATATAGTTTGAAACCTTCGAGAATTAGTCCGACCCTAAGTGTGGTAATGTTTCCTAAAGTTATCATGGAATTGTTTAGCTACTCCAAATGTTTGCAATATGACCATGTGGCTGTTAAGAAGTGTAAATCCATTTGAGACTAAAATAAATTTATGCATATGTTTGATGCTGATATAAAATTGCAAGCAAAGAACAAGGAAGCTTGCATTTCACGAAGTCCCATTGTTTACATTCAGGCATTTTTGAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCTAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAGTCAATTGACCAAGGTCATCTATAATGTTTTCTTAACCAAACAATTGCCTAATACTTCTGTTGTGATTTATATCTACGGTTAGCTCGGTATTGATAGCCATATTTTATTTGAACCGTATAATTTAAGGGTCAATATGGAAAACATATGACTTTAATTTACGAGAAAAATGCACTCGTGGTCTCTGAGGTTTGAGTTTGGAAGCATTTAGGTCTCTGTGTTTTCAAACCCAACAATTTAGCCCCTAAATTTTAGATTTAGTTTCATTTTGGTCCCTCGATCCAAATTTCCGTTAATTACTAACGACATGGTCATGACATTTGTTTTCCCTTCTCCGTCCTCCTCCCATTCTTCTTCTTCCTCCATCCATGGCTGCCACTAGCTACCATGGTCGCATCATCATTTATAATGACATAAATGAAACTAAATCCAAAACTCGGGGCTAAATTGTTAAGTTTGAAAACTCAGGGACCTAAGTGTTTCCGAGCTCAAACCTGAAGGACCAAAAGTTTTTCCATAATTTGTAATGACATTGTAATGTCCCACGTTGGTTGGGGAGGAGAACAAACCACTATTTATAAGGGTGTGGAAACCTTCCCCTAGTGGACGCGTTTTAAAGGTTTGAGGGAGAACCCGAAAGGGAAAGCCCAAAGAGGACATTATCTGCTAGCGGTAGATCTGGGCCGTTACAGATGGTATCAGAGCCGGACATCGGACGATGTGCCAGCCTTCTCGCTGTTCTCCGAAGGGGGGTAGACAGGAGACGGTGTGCCAATAAGGATGCTGGACCCCAAAGGGGGATGGATTTGGGGGCGGTCCCACATCGATTGGAGGAATGGAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGAATTGTGATGTCCCACATTGATTGGGGAGGAGAACAAACCACTATTTATAAGGGTGTGGAAACCTTCCTCTAGCAAACGCGTTTTAAAACTTTGAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCGGTAGATCTGGGTCGTTACAGACATATGTGAAAAATTTTGATATGGTTGTTCATCCTAAGGTTAGGACGAATTTACAAGAATATATTTTGAAAGTACTCTCACTGTATGCAATATTCATATTTATCTATGTATTTTATAAAATTGTATCGTGGATGCTTTTATCTAAACATCAAGTTTGATGATTGCTCTAGTTTTTGTTGTTTTTTTATGCTGAAACAGTTTTTCTTTATCCATGGGCAATGAGTTTTGATGGATTGGGGTATCTGTCTTTATAGAAGCTTTAATTTTCGTGTTTATCTTAATTGTCGGTTTAGTTTATGCATTGCAAAAAGGAGCATTGGAATGATCTTAGTTTTTGAATATTCGGACAATTAAAACAAACATCGAGACGGTTATGAATTCCATCGAGCTTCCCTTGATTGAACAACCCAAACTTCTTGATTGATACCTGATATTATCATCCTAAATTCCATCTAAATTTTGACTTCTGATTCTTTCCAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTCAGTACGATCTCTCTCTCTCTCTCTCTAACAGTACTTGTCGAAGTCAATTACCTTTTAGTCCCTGATGATTTGATTCGAGAGCCAACTATGGCTTTCAAAAGTGTTAAGAGTAATTTGAGTTAGCAATATTTGCTCACTACAGTTATATTGCGCTGCAGGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTGCCACAACCAATTGA ATGGCTTCATGGAATTCAGTTCCTATGGAGATCATCTACCAGCTATTAGGATGGAGTGCTATCATATGCTGGGCGCTCGCCTCATATCCGCAGATCATTCTGAATTTCTGGCGAAAAAGTGTTGTAGGATTGAGCTTTGATTTTGTGATGCTGAATTTCACGAAGCAATCGTCGTATTTGATTTACAACGCGAGTCTGTTCTTCAGCGCTACTGTTCAGAGGCAGTACTTCGAGAAATACGGCTTCGATCAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTTGTCTCCATGTTCAATTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCTAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAGTCAATTGACCAAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTCAGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTGCCACAACCAATTGA ATGGCTTCATGGAATTCAGTTCCTATGGAGATCATCTACCAGCTATTAGGATGGAGTGCTATCATATGCTGGGCGCTCGCCTCATATCCGCAGATCATTCTGAATTTCTGGCGAAAAAGTGTTGTAGGATTGAGCTTTGATTTTGTGATGCTGAATTTCACGAAGCAATCGTCGTATTTGATTTACAACGCGAGTCTGTTCTTCAGCGCTACTGTTCAGAGGCAGTACTTCGAGAAATACGGCTTCGATCAGATGATACCGGTGGCTTTGAGCGATGTGTTCTTCCCCTCGCACTCGATTTTATTGATCTTCATCGTTTCAGTTCAGATCTTTTTATTTGAATGTGGCGACCAGAAGGTCTCGAACTCAGCCGTCGCCATCTTCGCTGCAGTATGGGTTTTTGCAGCTGCTTGCTTTTTTATAGCTCTGCCTACTCATTCATGGCTTTGGCTTGTCTCCATGTTCAATTCAATTCAAGTTCTTATGACAGTCATCAAATACTCCCCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACGATGGGATTCAGCATTCATACTGTAGTTCTAGACTTCATTGGAGGAGTGGCCACTTTGACTCAAATGAGCGTGCAGTCAATTGACCAAGGTTCTTGGGTGAACTTCTTTGGAAATATAGGGAAGCCATTGTTAGCTTCAGTCTCTATAGTGTTTGATCTGATTTTCTTCTATCAACATTTTGTATTATATCGTGTCAAGGCATCAAAGGTTTCATCTCAACGTGACCCTGAAAGCACTGAGGCATTGCTTGAGAACTCTGATCACTTGCAAGGGATTGCCACAACCAATTGA MASWNSVPMEIIYQLLGWSAIICWALASYPQIILNFWRKSVVGLSFDFVMLNFTKQSSYLIYNASLFFSATVQRQYFEKYGFDQMIPVALSDVFFPSHSILLIFIVSVQIFLFECGDQKVSNSAVAIFAAVWVFAAACFFIALPTHSWLWLVSMFNSIQVLMTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQMSVQSIDQGSWVNFFGNIGKPLLASVSIVFDLIFFYQHFVLYRVKASKVSSQRDPESTEALLENSDHLQGIATTN Homology
BLAST of Csor.00g263350 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.5e-86 Identity = 154/266 (57.89%), Postives = 202/266 (75.94%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 9.2e-49 Identity = 99/242 (40.91%), Postives = 152/242 (62.81%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.1e-44 Identity = 101/240 (42.08%), Postives = 150/240 (62.50%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44 Identity = 101/239 (42.26%), Postives = 150/239 (62.76%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.1e-41 Identity = 96/239 (40.17%), Postives = 147/239 (61.51%), Query Frame = 0
BLAST of Csor.00g263350 vs. NCBI nr
Match: KAG6588928.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 541 bits (1394), Expect = 7.11e-194 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of Csor.00g263350 vs. NCBI nr
Match: KAG7022696.1 (Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 540 bits (1392), Expect = 1.43e-193 Identity = 275/276 (99.64%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of Csor.00g263350 vs. NCBI nr
Match: XP_023530874.1 (cystinosin homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 538 bits (1385), Expect = 1.67e-192 Identity = 272/276 (98.55%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of Csor.00g263350 vs. NCBI nr
Match: XP_022928176.1 (cystinosin homolog [Cucurbita moschata] >XP_022928177.1 cystinosin homolog [Cucurbita moschata]) HSP 1 Score: 539 bits (1388), Expect = 1.90e-192 Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Csor.00g263350 vs. NCBI nr
Match: XP_038884260.1 (cystinosin homolog isoform X3 [Benincasa hispida]) HSP 1 Score: 452 bits (1164), Expect = 7.97e-159 Identity = 226/276 (81.88%), Postives = 251/276 (90.94%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1) HSP 1 Score: 539 bits (1388), Expect = 9.19e-193 Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1) HSP 1 Score: 436 bits (1122), Expect = 1.03e-152 Identity = 216/278 (77.70%), Postives = 247/278 (88.85%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1) HSP 1 Score: 435 bits (1119), Expect = 2.96e-152 Identity = 212/273 (77.66%), Postives = 245/273 (89.74%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy TrEMBL
Match: A0A5D3E357 (Cystinosin-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00520 PE=4 SV=1) HSP 1 Score: 402 bits (1034), Expect = 2.87e-139 Identity = 197/266 (74.06%), Postives = 231/266 (86.84%), Query Frame = 0
BLAST of Csor.00g263350 vs. ExPASy TrEMBL
Match: A0A1S3BP09 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491741 PE=4 SV=1) HSP 1 Score: 400 bits (1029), Expect = 1.65e-138 Identity = 195/266 (73.31%), Postives = 230/266 (86.47%), Query Frame = 0
BLAST of Csor.00g263350 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein ) HSP 1 Score: 320.9 bits (821), Expect = 1.0e-87 Identity = 154/266 (57.89%), Postives = 202/266 (75.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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