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Csor.00g263300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCACCTACAAGAACAATTGCTGCTCTCGCTAGCCAGACCTCACAAAATCTCTCATTGCCCTATATTCTTCACCAGCCTCTTGACATTGATAGGAAACCAGACGGCCATTGTGATTCTAATTTAAACGCTGTTTCAACTTCGAATCCGTCTCAATTTTCGCTGTTCTTCCCTAGTTTTCCATTTGGGCTTTGCTTGCAGCAAATCTCCTCAACTGGCTCGATTCGATTCGAGCCGGATTATGTTGAAGATGACGATTCTCGGAAGCTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAACACAAGTACAAGAAGCTAAGGAAGAGACTTCGTAGACAGACATAG ATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCACCTACAAGAACAATTGCTGCTCTCGCTAGCCAGACCTCACAAAATCTCTCATTGCCCTATATTCTTCACCAGCCTCTTGACATTGATAGGAAACCAGACGGCCATTGTGATTCTAATTTAAACGCTGTTTCAACTTCGAATCCGTCTCAATTTTCGCTGTTCTTCCCTAGTTTTCCATTTGGGCTTTGCTTGCAGCAAATCTCCTCAACTGGCTCGATTCGATTCGAGCCGGATTATGTTGAAGATGACGATTCTCGGAAGCTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAACACAAGTACAAGAAGCTAAGGAAGAGACTTCGTAGACAGACATAG ATGGCGTCGATTCTTCAAAAGCTCATTAGAAAATCGCCACCTACAAGAACAATTGCTGCTCTCGCTAGCCAGACCTCACAAAATCTCTCATTGCCCTATATTCTTCACCAGCCTCTTGACATTGATAGGAAACCAGACGGCCATTGTGATTCTAATTTAAACGCTGTTTCAACTTCGAATCCGTCTCAATTTTCGCTGTTCTTCCCTAGTTTTCCATTTGGGCTTTGCTTGCAGCAAATCTCCTCAACTGGCTCGATTCGATTCGAGCCGGATTATGTTGAAGATGACGATTCTCGGAAGCTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAACACAAGTACAAGAAGCTAAGGAAGAGACTTCGTAGACAGACATAG MASILQKLIRKSPPTRTIAALASQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNAVSTSNPSQFSLFFPSFPFGLCLQQISSTGSIRFEPDYVEDDDSRKLWADSVKKKRKRKMNKHKYKKLRKRLRRQT Homology
BLAST of Csor.00g263300 vs. NCBI nr
Match: XP_022928332.1 (uncharacterized protein LOC111435191 [Cucurbita moschata] >KAG6588923.1 hypothetical protein SDJN03_17488, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250 bits (639), Expect = 1.37e-83 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Csor.00g263300 vs. NCBI nr
Match: XP_023530210.1 (uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242 bits (618), Expect = 2.18e-80 Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of Csor.00g263300 vs. NCBI nr
Match: KAG7022690.1 (hypothetical protein SDJN02_16424, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 242 bits (617), Expect = 3.31e-80 Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Csor.00g263300 vs. NCBI nr
Match: XP_022989528.1 (uncharacterized protein LOC111486591 [Cucurbita maxima]) HSP 1 Score: 230 bits (587), Expect = 1.16e-75 Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of Csor.00g263300 vs. NCBI nr
Match: KAG7017804.1 (hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212 bits (539), Expect = 2.42e-68 Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of Csor.00g263300 vs. ExPASy TrEMBL
Match: A0A6J1EJL0 (uncharacterized protein LOC111435191 OS=Cucurbita moschata OX=3662 GN=LOC111435191 PE=4 SV=1) HSP 1 Score: 250 bits (639), Expect = 6.61e-84 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Csor.00g263300 vs. ExPASy TrEMBL
Match: A0A6J1JQJ4 (uncharacterized protein LOC111486591 OS=Cucurbita maxima OX=3661 GN=LOC111486591 PE=4 SV=1) HSP 1 Score: 230 bits (587), Expect = 5.63e-76 Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of Csor.00g263300 vs. ExPASy TrEMBL
Match: A0A6J1F832 (uncharacterized protein LOC111441723 OS=Cucurbita moschata OX=3662 GN=LOC111441723 PE=4 SV=1) HSP 1 Score: 210 bits (535), Expect = 4.77e-68 Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of Csor.00g263300 vs. ExPASy TrEMBL
Match: A0A0A0LDP0 (DUF1713 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=4 SV=1) HSP 1 Score: 208 bits (530), Expect = 2.76e-67 Identity = 107/130 (82.31%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g263300 vs. ExPASy TrEMBL
Match: A0A5A7UNU9 (DUF1713 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00280 PE=4 SV=1) HSP 1 Score: 208 bits (529), Expect = 3.92e-67 Identity = 108/130 (83.08%), Postives = 116/130 (89.23%), Query Frame = 0
BLAST of Csor.00g263300 vs. TAIR 10
Match: AT5G63150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1713, mitochondria (InterPro:IPR013177); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 3.8e-08 Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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