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Csor.00g263160 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTATTACTTCTTTTTCTTCTTCTTGACTTTCTACAACTGTAATTCCGTTTGTTTTGTTCTTTTTCTTTGTTACTTTTGTGTTGATTGATGAACTTTGATGCTTTGAAATTAGTGGTTAGGATCATTTTTGCCTACTGATCTTCTGAAGCGAAGTCATGTGCGATCTAAAGTGTTTGGTTCTTTCTTTTTCTAATTGAATATCTTATGGAATCATTGCCTTTTGGACATATTGTTTAATTGGATTGATGATGTTGATCTAGGTCCCATTTGTTTTGTATTATCTAAATCTTCAGAGATTGATGAACAGAGGAATTTTGTTTTTAATAATTGTTCATTAAAATTAGAGAAATCCTAGATTTCCTTTCTGTCTCTTGTGGCTTGATGATCAAATTTATTAGAAGGAATTTGGGATTGTTCTGTGTTCTGAGATGAAGAAATCATTCCTTTCTTCATTGGATGCTCTGTTTCCTGTGAAGTTCTATGTATTGTTCTGAGTGGATTGTGGTTGATTATTGAACTGCTATAAGAAAAAAAAGTCTCATAGAGCTTTGTTACTATAGTTTTCTCGCTTTTTATACAAGAAATTATTAGAGGAAGCTGTCACTATGTGACGTTCGATTTCGGATGGTTGGATGTAGGAAAAATGCTTCAAAGATATTTCAAATATTGTATTTAGACCTGCGGTTTTTAGAATCCTTACCTAACAATTATTAAGAGGTTGTGAGGACAATATCTTCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCAAGATACCGGGCAGTACGCCAGCTAGGACGCTGGGCCCTGAAGGGGGTGGATTATGAGACCCCACATCAATTGGAGAGAGAAATGAGTGCTAGCAAGGACGTTGGGCCTCGAAGGTGGGTGGATTGAGATCCCGTATCGATTGGAAAGAGGAACGAGTGTCAGCGAGGACGTTGGACCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGAAGAGGGGAACGAAGCATTGTTTATAAGGATGTGGAAACCTCTCCCTACCTGACGCATTTTTAAAACTTTGAAGTGAAACCCGAAAAGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTGGACTTAGACTGTTACAAAAGTAGTCTTGTTACAGGGATTGCTATCTTTGATAGATAGTTTCTTATTTCTCTTAATTTCACATGAATCATGCCAGGGTTCATGTGAAGTGAAGAATGCTAACTCGAAAAACTTTTCACCAAAAATCGAACCCAGTAACTCGAAAAACTTCTCGTGTCTTTTTGGTATGATTTTTCAATGCCATGGTTTGTTTAGGCTGCTATTTCTCTTTTTTTTTTTAATATCCGTGAATGTTCGGGCCTCAACTATTCTCACATGACAACTGTCTCATCCTAACATGTTTGATTGCTAAAGTAACTCGTAGGATATTAAATCCTAAGTAGATGGTCACTCCGACGTAAACTCGTTCTTACTAATCCCTTTACAATTTATACGACCCTTATTGATCACTAGGTCAAATCCATGGCGTTCATATGATTGAATTCTTTCTTTTATGTCCTTGAATTTATTCCATATGTTTTGGGTAATTTCTTCTATGTTGGCTGTTCTATGAAAGAAGTTGACAATAGAACTGTGCTGTTTTCATAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGGTAAGTAGACATTTAAAACGTTCGTTTACTCTAATAGATCATATCATATTAAAAATGATCTTATAGGTTTCCGAACTTTCAATTTTGTGAGCTTAAAGAACTCTTTTTATGCTAGTTGCATTTTGATTTCTTCTCCTAAAAGTATTCGATTGCAATGGCTGCAGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGAGAGGACCTCTAATAGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTTGGCGACCGGAGGAAGAAGGCACATCCAGCCATAGTCGTATAG ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGAGAGGACCTCTAATAGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTTGGCGACCGGAGGAAGAAGGCACATCCAGCCATAGTCGTATAG ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGAGAGGACCTCTAATAGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTTGGCGACCGGAGGAAGAAGGCACATCCAGCCATAGTCGTATAG MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAGGVDGEGGVGGVGGVFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTPRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKSHVSRTNSVCSSSERTSNRDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKAHPAIVV Homology
BLAST of Csor.00g263160 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16 Identity = 65/163 (39.88%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Csor.00g263160 vs. NCBI nr
Match: KAG6588909.1 (hypothetical protein SDJN03_17474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 467 bits (1202), Expect = 5.19e-166 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Csor.00g263160 vs. NCBI nr
Match: KAG7022674.1 (hypothetical protein SDJN02_16408, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 452 bits (1163), Expect = 5.11e-160 Identity = 231/237 (97.47%), Postives = 231/237 (97.47%), Query Frame = 0
BLAST of Csor.00g263160 vs. NCBI nr
Match: XP_022928326.1 (uncharacterized protein At3g27210-like [Cucurbita moschata]) HSP 1 Score: 446 bits (1147), Expect = 1.26e-157 Identity = 225/234 (96.15%), Postives = 225/234 (96.15%), Query Frame = 0
BLAST of Csor.00g263160 vs. NCBI nr
Match: XP_022989721.1 (uncharacterized protein At3g27210-like [Cucurbita maxima]) HSP 1 Score: 429 bits (1104), Expect = 3.39e-151 Identity = 219/234 (93.59%), Postives = 221/234 (94.44%), Query Frame = 0
BLAST of Csor.00g263160 vs. NCBI nr
Match: XP_023530812.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425 bits (1092), Expect = 2.28e-149 Identity = 218/234 (93.16%), Postives = 218/234 (93.16%), Query Frame = 0
BLAST of Csor.00g263160 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1) HSP 1 Score: 446 bits (1147), Expect = 6.10e-158 Identity = 225/234 (96.15%), Postives = 225/234 (96.15%), Query Frame = 0
BLAST of Csor.00g263160 vs. ExPASy TrEMBL
Match: A0A6J1JKY5 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111486720 PE=4 SV=1) HSP 1 Score: 429 bits (1104), Expect = 1.64e-151 Identity = 219/234 (93.59%), Postives = 221/234 (94.44%), Query Frame = 0
BLAST of Csor.00g263160 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1) HSP 1 Score: 343 bits (880), Expect = 1.72e-117 Identity = 175/234 (74.79%), Postives = 188/234 (80.34%), Query Frame = 0
BLAST of Csor.00g263160 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1) HSP 1 Score: 341 bits (875), Expect = 9.93e-117 Identity = 175/234 (74.79%), Postives = 186/234 (79.49%), Query Frame = 0
BLAST of Csor.00g263160 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1) HSP 1 Score: 336 bits (862), Expect = 1.21e-114 Identity = 178/235 (75.74%), Postives = 193/235 (82.13%), Query Frame = 0
BLAST of Csor.00g263160 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-18 Identity = 65/163 (39.88%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of Csor.00g263160 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17 Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 0
BLAST of Csor.00g263160 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 4.7e-17 Identity = 79/236 (33.47%), Postives = 113/236 (47.88%), Query Frame = 0
BLAST of Csor.00g263160 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16 Identity = 73/209 (34.93%), Postives = 99/209 (47.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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