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Csor.00g263040 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTGCAGCCGAGCGATTTCGATCGCTTACTTTTCTTCGAGCACGCTCGGAAGAATGCCGAAGCTTCATACGCCCAGAATCCCCTCGATGCCGATGTGAGTTTTCTTTTCTTGTTATTTTTTCGTCTCTTAATTTGCTCATTGCGCTGTTTATGTTGATTTTGTGGCTGTTTTTGTTTTTGTTGGGTTTGTGGAGGATTATGTTTAATTCTATAAAATGTTATGAAACTCGAGGGTTGGTTTCAATTGTGCTTGAAATTTGGGTGTTAATTAGCTTTTTAGTTGTCGTCATTCATCCATAGGAGCATAGTGCTGCAATTACTTGATGATTTTAAGCCATGGCCTCAATTTCTATGAGTTAATCACGAGATAAGGCCCCAATTCTTGCATTTTGATTGCTAGAGGGAGTGAAAATAAAGGAAAGTAATGGCTCCCTGTTCATATCCGAGTTGCCATTTGGCTGTCAGCTTAGAACTCTGTTTAAATGTTTGAAACTAATCCTGTCGTTTATTAGATAATGGGCGTTTTTTCTTTAATCGGTGTTGTGTTTATGACTCTTGAGCTTTATTTGATTATCAAATGTATGGAATTTCATGTAGAATTTGACAAGATGGGCAGGAGCTTTGTTGGAGCTATCTCAGTTTCAAAGCGTTATAGAATCGAAGAAGATGATTCTAGGTATCTTTTTGTTCTACCCAGTTGGATGATGAAGCATGGGAATTGAGAACATTTTTGCTTGACTTTAATTTGTTGCTGCTCTAAGATTTTCCTTGCCTTTTTCTTCTAATCTAATGATTTTGGTGATGGACATTGAGTATATTGTGGGTTAATTTGAAATGGGGTTGAGACAGATTCAATAGCTAAGCTGGAGGAGGCACTATTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCTTAGGAAATGCTTATACTTCCCATGCCTTTTTGAACCCGAACCAGGATGAGGCAAAGAGTTATTTTGATAAGGCGTCGGTATACTTCAAGCAAGCTGTGGATGAGGTACTGAAGCTAGAAAACCGTGGAGCGAGCTTATAAATATGCATTTCTTGATGGCTTTCCTAGTTTGACATGGTTTTTTGTTGTTGCATTCAGGATCCTGGAAATGAACTTTATCTAAAGTCTTTGGAGGTGACTGCAAAGGTACTTTAACATTCTTTGGTGCAATTTTAATATCTTTCCATTTTCATGAATACTAAGCTCCTTTCAATGGGTTTGAATTGAGAGAATCTGTTTGAGATCCTACATTGGTTGGGGAGGAGAATGAAACATTCTTTATAAAGGTGTGAAAATCTCTCCCTAGCATACGCATTTTAAAAACGTTGAGGGGAAGCCCGAAAGGGAAGGCCCAAAGAGGACAATATCTGGTAGCAGTGGGCTTGGTCTATTACAAATGGTAGCAAAACTAGACATCAGGTGATGTGCCAGCGAGGAGGCTGAGGCTCGAAGGGGGGTGGACACGAGGTGGTGTGCCAGCAAGGACGTTGAGAGAAGGGAACGAGTGCCAGCGAGGATGCTGGGCCCTGAAGAGGGGGTGGTTATGAGATCCCACATCAGTTGGAAAGGAGAACGAAACATTCTTTATAAGAGCGTGAAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAAGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGAGCTTGGGCTATTACAAATAGTATGAGAGCCAAACACTGGGCGACGTGTCGGCGCGGAGGTTGAGCCCCGAAGGGGGTGGACACGAGGCAATGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGGTGGATTATGAGATCCCACATTGGTTTGAGAGGAGAACAAAACATTATTTATAAGGGCGTGGAAACCTCTCCCTAGCAGACATGTCTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGTACTTGGGCTATTACAAATGATATGAGAGCCAAACACTGAGCGATGTGTTAGCGCGGAGGTTGAGCCCAAAGGGTGGTGGACATGAGGCAATGTGGCCCCGAAGGGGGTGGATTATGAGATCCCACATCGGTTGGGGAGGGGAAGCTCAAAGAGGACAATATCTACTAGCGGTGAGCTTGGGCTTGGGCTGTTACAAGAGAGAAAGACTTTTTTCTTATCTTGTCTTTTTTTTTTAAATAAAAAGTAAGCGGGTGTCAAGAACTTAGAGGTGGCGGCTGCCACTGTGTCGGTAATGAAGTATTTTGCATTAGGGATAAGTCTCTCTTGAAGAACCAAGATTGGTGGAACAAATATATTTGAATGCTTTCATGTTGTAAACTAGAACTTGACTATTTTTACTTAGTGTTTTGTTTCTCCCATTTGTTATATCCATGACCCGCTTTTATTTGGTGGATTGTGTGTTTTAGGCCCCAGAATTGTATGCAGAAATTCATAAGCATGGGTTTGTTCAACAGACGACTGGAACAGCTGAACCGTCTGCTTCGTCTAGTACTAAGGTATTGCTTATTGCTTAGAGATGATAACGTATCAGCTGAACTGCTATGTTCTACGAAAACATGCTTTATATATTCCGTTGACTTGTTAGAAAAAGGTGCCTTTATCTTACTATATACTCATTTTGAGATCCCACGTCGGTTGGAGAAGGGAACGAAGCATATAAGGGTGTAGAAACTTCTCCCTAGCAGATGCGTTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAATCCCAAAGAGAACAATATCTGCTAGCGGTGGACTTAGGCTAGCTTTTTTTCGTATTCCCTTGAACATTCTTTCACTTTGCTTGTTAAAAACTCGGTTTCTTCCCAAAAAGAACAAATCATAAACAGTTTACAAGCTCTTAACTTCATGCTTTACTTCTTTCTAGACATTAAAGGAAACGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGGTAATACTTGTTGTTGGTATAGTTGCATGGGCGGGGTTTGCGAAATCTCACATCCCGCCCACACCACCACCTCGATAA ATGGATTTGCAGCCGAGCGATTTCGATCGCTTACTTTTCTTCGAGCACGCTCGGAAGAATGCCGAAGCTTCATACGCCCAGAATCCCCTCGATGCCGATAATTTGACAAGATGGGCAGGAGCTTTGTTGGAGCTATCTCAGTTTCAAAGCGTTATAGAATCGAAGAAGATGATTCTAGATTCAATAGCTAAGCTGGAGGAGGCACTATTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCTTAGGAAATGCTTATACTTCCCATGCCTTTTTGAACCCGAACCAGGATGAGGCAAAGAGTTATTTTGATAAGGCGTCGGTATACTTCAAGCAAGCTGTGGATGAGGATCCTGGAAATGAACTTTATCTAAAGTCTTTGGAGGTGACTGCAAAGGCCCCAGAATTGTATGCAGAAATTCATAAGCATGGGTTTGTTCAACAGACGACTGGAACAGCTGAACCGTCTGCTTCGTCTAGTACTAAGACATTAAAGGAAACGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGGTAATACTTGTTGTTGGTATAGTTGCATGGGCGGGGTTTGCGAAATCTCACATCCCGCCCACACCACCACCTCGATAA ATGGATTTGCAGCCGAGCGATTTCGATCGCTTACTTTTCTTCGAGCACGCTCGGAAGAATGCCGAAGCTTCATACGCCCAGAATCCCCTCGATGCCGATAATTTGACAAGATGGGCAGGAGCTTTGTTGGAGCTATCTCAGTTTCAAAGCGTTATAGAATCGAAGAAGATGATTCTAGATTCAATAGCTAAGCTGGAGGAGGCACTATTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCTTAGGAAATGCTTATACTTCCCATGCCTTTTTGAACCCGAACCAGGATGAGGCAAAGAGTTATTTTGATAAGGCGTCGGTATACTTCAAGCAAGCTGTGGATGAGGATCCTGGAAATGAACTTTATCTAAAGTCTTTGGAGGTGACTGCAAAGGCCCCAGAATTGTATGCAGAAATTCATAAGCATGGGTTTGTTCAACAGACGACTGGAACAGCTGAACCGTCTGCTTCGTCTAGTACTAAGACATTAAAGGAAACGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGGTAATACTTGTTGTTGGTATAGTTGCATGGGCGGGGTTTGCGAAATCTCACATCCCGCCCACACCACCACCTCGATAA MDLQPSDFDRLLFFEHARKNAEASYAQNPLDADNLTRWAGALLELSQFQSVIESKKMILDSIAKLEEALLINPKKHDALWCLGNAYTSHAFLNPNQDEAKSYFDKASVYFKQAVDEDPGNELYLKSLEVTAKAPELYAEIHKHGFVQQTTGTAEPSASSSTKTLKETKSSDLKYDIFGWVILVVGIVAWAGFAKSHIPPTPPPR Homology
BLAST of Csor.00g263040 vs. ExPASy Swiss-Prot
Match: P92792 (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM20 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 2.7e-82 Identity = 151/203 (74.38%), Postives = 175/203 (86.21%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy Swiss-Prot
Match: P82874 (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63 Identity = 116/197 (58.88%), Postives = 149/197 (75.63%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy Swiss-Prot
Match: P82873 (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 220.7 bits (561), Expect = 1.5e-56 Identity = 109/210 (51.90%), Postives = 146/210 (69.52%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy Swiss-Prot
Match: P82805 (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana OX=3702 GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54 Identity = 114/198 (57.58%), Postives = 147/198 (74.24%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy Swiss-Prot
Match: Q5JJI4 (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica OX=39947 GN=TOM20 PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.3e-51 Identity = 102/197 (51.78%), Postives = 139/197 (70.56%), Query Frame = 0
BLAST of Csor.00g263040 vs. NCBI nr
Match: KAG6588897.1 (Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 412 bits (1058), Expect = 4.68e-145 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of Csor.00g263040 vs. NCBI nr
Match: KAG7022662.1 (Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 412 bits (1058), Expect = 3.25e-144 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of Csor.00g263040 vs. NCBI nr
Match: XP_022989712.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 407 bits (1045), Expect = 4.49e-143 Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of Csor.00g263040 vs. NCBI nr
Match: XP_023529318.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406 bits (1044), Expect = 6.38e-143 Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of Csor.00g263040 vs. NCBI nr
Match: XP_022928550.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita moschata]) HSP 1 Score: 405 bits (1041), Expect = 1.83e-142 Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy TrEMBL
Match: A0A6J1JGL3 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111486712 PE=3 SV=1) HSP 1 Score: 407 bits (1045), Expect = 2.17e-143 Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy TrEMBL
Match: A0A6J1ERZ1 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111435326 PE=3 SV=1) HSP 1 Score: 405 bits (1041), Expect = 8.86e-143 Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy TrEMBL
Match: A0A6J1F645 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111442468 PE=3 SV=1) HSP 1 Score: 371 bits (953), Expect = 2.48e-129 Identity = 179/203 (88.18%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy TrEMBL
Match: A0A6J1J9L2 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111482523 PE=3 SV=1) HSP 1 Score: 371 bits (952), Expect = 3.53e-129 Identity = 179/203 (88.18%), Postives = 189/203 (93.10%), Query Frame = 0
BLAST of Csor.00g263040 vs. ExPASy TrEMBL
Match: A0A6J1DQV5 (mitochondrial import receptor subunit TOM20 OS=Momordica charantia OX=3673 GN=LOC111023409 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 8.28e-123 Identity = 172/204 (84.31%), Postives = 184/204 (90.20%), Query Frame = 0
BLAST of Csor.00g263040 vs. TAIR 10
Match: AT3G27080.1 (translocase of outer membrane 20 kDa subunit 3 ) HSP 1 Score: 244.2 bits (622), Expect = 9.1e-65 Identity = 116/197 (58.88%), Postives = 149/197 (75.63%), Query Frame = 0
BLAST of Csor.00g263040 vs. TAIR 10
Match: AT1G27390.1 (translocase outer membrane 20-2 ) HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57 Identity = 109/210 (51.90%), Postives = 146/210 (69.52%), Query Frame = 0
BLAST of Csor.00g263040 vs. TAIR 10
Match: AT5G40930.1 (translocase of outer membrane 20-4 ) HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55 Identity = 114/198 (57.58%), Postives = 147/198 (74.24%), Query Frame = 0
BLAST of Csor.00g263040 vs. TAIR 10
Match: AT3G27070.1 (translocase outer membrane 20-1 ) HSP 1 Score: 192.2 bits (487), Expect = 4.1e-49 Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 0
BLAST of Csor.00g263040 vs. TAIR 10
Match: AT3G27070.2 (translocase outer membrane 20-1 ) HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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