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Csor.00g262780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGTGAGATCCCTTCTTCTTTCTGATTTCCCTTCTTCCATTTTCATTCCATCTCATTCTTTCTTCTCTTTGTAGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGGTTCGTTTTCCCCCCTTTTTTCTTTAATTTCTTTATGGTTATTACTCTGCGGATGATCGTTTTCTTGATTCATTGATTGATTCTGTTTTGTGTAAATTGATTGGATTTGAAGAGATGAATGTTTGTGGAATTATGTCGATTTTTAGTTTAGGAATTCGATCTGTTTTGTGTAAAATGATTGTTAGATCAATTTAAGCATCAATTGATTTAATTTAACATTTCTAATTTGTTCGAAGGGGAAATTTTGAACCAATGCTTTATTGTTCTTGCTATCATGAACTAAGCTGCATTTTTCTTTGTTCAGGAAGAAAAGGAGGAAGGTAAATTGATGAATTGGATGGTTTTTTAGTTTAGTTATGGATGGAAGAACTTAACAATCTTGTTCTTGTTCTTGTTTTCGGGATTTTCTTGGAACGTAGAAGAGATTGTCATTCTAGGTGGAGGAACTAGGAAGTTCTTTTGATTCGAGTTTGGGATAGAGTCGTTTGGCGTACTTGTTTTATTGGTTTTTATGGTTCGGTATTTGGCTCGAGAGGAATAGTAGAATTTTTCGAGTGTTTGAGAGGGAATTGGATGGTCTTTTAGTTAAGTTATGGATGGAAGAACTTAACCATCTTGTTCCCGTTCTCGCTTTCGGGATTTTCTTGGAACGTAAATGAGATTGTTGTTCTATGGTGGAGGAACTAGGAGGTTCTTTTGAATCCTCCCTTTCGAGTTCGGTATAGAGTCATTTAGACACTTGTTTTATAGGTTTTTATGGTTTGGTACTTGGCTCGAGAGGAACAGTAGAATTTTTCGTGTGTTTGAGAGGGAATTGGACGGTTTTTTAGTTAAGTTATGGATGGAAGACCTTAACAATCTTGTTCTTGTTCTCGCTTCCGGGTTTTCTTGGAACGTAAACGAGATTGTTGTTCTATGGTGGAGGAACTAAGAAGTTCTTTTGAATCCACCCTTTCAAGTTTGGGATAGAGTCATTTGGAACGCTTGTTTTATTGGTTTTTATGGTCCGGTATTTGGCTCGAGAGAAACAATAGAATTTTTCGAGTGTTTGAGAGGTCGAGGTGTGGGATATGGTTAGATCTAACTCTCCTTCATCTAACCATAGTATGCGTTTATTAGTTAATGATTCTTGGTCCCGTCCATCAAAGATCCCTATTTTCTGTTTCAATTTTTCCCAGTTTATTAGAACCGTTTTTTGATTTATTACATAAGTAGCGAACAAGTTCAATAAATTTATAATTTATAAATGTTCTCGTGCACGAGATGGCCGAAGAAACCCGCTCTCCTTCGAGTGTGTTTTGTCGGTTTCCTACTCGTTGTCATTTTGTGTAGAACTTGATTTTCTTAGCAGAGCTTATTATATGCCATTTTCCTCCTCCGTTTTGCAGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAG ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAG ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGGATGTTTAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAG MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGCLATLCCCCMLEECLACFR Homology
BLAST of Csor.00g262780 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-06 Identity = 46/102 (45.10%), Postives = 52/102 (50.98%), Query Frame = 0
BLAST of Csor.00g262780 vs. NCBI nr
Match: XP_022928579.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_023529271.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG6588871.1 hypothetical protein SDJN03_17436, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221 bits (563), Expect = 6.73e-73 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g262780 vs. NCBI nr
Match: XP_022989747.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]) HSP 1 Score: 217 bits (552), Expect = 3.21e-71 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g262780 vs. NCBI nr
Match: XP_022934109.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata] >XP_022983676.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima] >XP_023527083.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo] >KAG7017860.1 hypothetical protein SDJN02_19726 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183 bits (465), Expect = 6.64e-58 Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Csor.00g262780 vs. NCBI nr
Match: KAG6581126.1 (hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182 bits (462), Expect = 2.09e-57 Identity = 88/108 (81.48%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Csor.00g262780 vs. NCBI nr
Match: KAG7022631.1 (hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181 bits (458), Expect = 2.29e-56 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Csor.00g262780 vs. ExPASy TrEMBL
Match: A0A6J1EL88 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111435344 PE=3 SV=1) HSP 1 Score: 221 bits (563), Expect = 3.26e-73 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g262780 vs. ExPASy TrEMBL
Match: A0A6J1JGP0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111486738 PE=4 SV=1) HSP 1 Score: 217 bits (552), Expect = 1.56e-71 Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g262780 vs. ExPASy TrEMBL
Match: A0A6J1J313 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111482221 PE=3 SV=1) HSP 1 Score: 183 bits (465), Expect = 3.22e-58 Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Csor.00g262780 vs. ExPASy TrEMBL
Match: A0A6J1F1N0 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111441381 PE=3 SV=1) HSP 1 Score: 183 bits (465), Expect = 3.22e-58 Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Csor.00g262780 vs. ExPASy TrEMBL
Match: A0A1S3BP97 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103491722 PE=4 SV=1) HSP 1 Score: 178 bits (451), Expect = 3.87e-56 Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Csor.00g262780 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein ) HSP 1 Score: 82.0 bits (201), Expect = 3.0e-16 Identity = 61/131 (46.56%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of Csor.00g262780 vs. TAIR 10
Match: AT1G12810.2 (proline-rich family protein ) HSP 1 Score: 65.1 bits (157), Expect = 3.8e-11 Identity = 61/164 (37.20%), Postives = 67/164 (40.85%), Query Frame = 0
BLAST of Csor.00g262780 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.5e-07 Identity = 49/114 (42.98%), Postives = 58/114 (50.88%), Query Frame = 0
BLAST of Csor.00g262780 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 52.0 bits (123), Expect = 3.3e-07 Identity = 46/102 (45.10%), Postives = 52/102 (50.98%), Query Frame = 0
BLAST of Csor.00g262780 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 4.0e-05 Identity = 37/83 (44.58%), Postives = 41/83 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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