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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAATCACCAAGACCGATCAAATGTTCAAATGCTGTGGGTATCCTACAACACGGTCTAAGAATTTGATCTTGAATTAGTGTTCTCCGCCCAGCTACTTGTTGGAATGAGTATCGTTGGCCCGAAAAAGAGGAGATAGACATAATAATGGCAGTGTAAACGGTATGTACATGAGTAAATTTAAAAGTTTCAATAATACTCTTAAAATTAAAAAAAAAAAAAAAAATCTAAAAAAATTTAATAGTTATTTTCGAGATTTATTAATATCTAGCCATTTACAGGCTGTTAAGAGGTTATGGGTGGGCCCATTTTGATGTAGGCCCACTTTATAACTTTACTGGGCCACAAGTGAAAGTATCTATACGGCCCATTTAATAAGAATTTCTATTCTGGGACAGTACGCGAAATTGGGGTATAAAAGGAGTGAATAATGAAAATTTCAGAGTTTTAAGTGCTCATTTTGTAGCGGGAGTTCCGGAGCGAGGGAAAGGATTTGCAAGCGATATACCGATCGTTAATGGCGGAATATCGATCCATTTACCGACTCCATTGATGCTGATGGAACTAATAGAAGGAGAAGACAACGCCGTCCGATTGCCCTACGGCCGTTCCATTCGAGAGCTTCTCTTTCATTCTCCTGGTAACGCTTTTAGTTCGTCTTACGTTGCGAAGGATTATTCTGATCTTGATATTTTCTTTTCTTTTCCTGTGTTTGTGTAA mRNA sequence ATGGAATCACCAAGACCGATCAAATGTTCAAATGCTGTGGCGGGAGTTCCGGAGCGAGGGAAAGGATTTGCAAGCGATATACCGATCGTTAATGGCGGAATATCGATCCATTTACCGACTCCATTGATGCTGATGGAACTAATAGAAGGAGAAGACAACGCCGTCCGATTGCCCTACGGCCGTTCCATTCGAGAGCTTCTCTTTCATTCTCCTGGTAACGCTTTTAGTTCGTCTTACGTTGCGAAGGATTATTCTGATCTTGATATTTTCTTTTCTTTTCCTGTGTTTGTGTAA Coding sequence (CDS) ATGGAATCACCAAGACCGATCAAATGTTCAAATGCTGTGGCGGGAGTTCCGGAGCGAGGGAAAGGATTTGCAAGCGATATACCGATCGTTAATGGCGGAATATCGATCCATTTACCGACTCCATTGATGCTGATGGAACTAATAGAAGGAGAAGACAACGCCGTCCGATTGCCCTACGGCCGTTCCATTCGAGAGCTTCTCTTTCATTCTCCTGGTAACGCTTTTAGTTCGTCTTACGTTGCGAAGGATTATTCTGATCTTGATATTTTCTTTTCTTTTCCTGTGTTTGTGTAA Protein sequence MESPRPIKCSNAVAGVPERGKGFASDIPIVNGGISIHLPTPLMLMELIEGEDNAVRLPYGRSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVFV
Homology
BLAST of Csor.00g262760 vs. NCBI nr
Match: KAG6588869.1 (hypothetical protein SDJN03_17434, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (501), Expect = 1.35e-63 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 Query: 1 MESPRPIKCSNAVAGVPERGKGFASDIPIVNGGISIHLPTPLMLMELIEGEDNAVRLPYG 60 MESPRPIKCSNAVAGVPERGKGFASDIPIVNGGISIHLPTPLMLMELIEGEDNAVRLPYG Sbjct: 1 MESPRPIKCSNAVAGVPERGKGFASDIPIVNGGISIHLPTPLMLMELIEGEDNAVRLPYG 60
Query: 61 RSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVFV 97 RSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVFV Sbjct: 61 RSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVFV 97
BLAST of Csor.00g262760 vs. NCBI nr
Match: KAG6581128.1 (hypothetical protein SDJN03_21130, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 53.9 bits (128), Expect = 1.12e-06 Identity = 28/46 (60.87%), Postives = 30/46 (65.22%), Query Frame = 0 Query: 51 EDNAVRLPYGRSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVF 96 E+ AVRLP G R+L HSPGNA SSY AKD S D F FPVF Sbjct: 70 EEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVF 115
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6588869.1 | 1.35e-63 | 100.00 | hypothetical protein SDJN03_17434, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6581128.1 | 1.12e-06 | 60.87 | hypothetical protein SDJN03_21130, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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