Csor.00g261780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g261780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Location	Csor_Chr11: 11291437 .. 11295171 (+)
RNA-Seq Expression	Csor.00g261780
Synteny	Csor.00g261780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCACTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGTGCGAGATAGTTCTCTCCCTTTTCAGTTTTCGATTGGTGCTAATTTTGATGGATTCTGTGCTGTTTGTAATAGGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACTTATAGTCTCTTCTTATCTGTTTTACGTACTCTTTGGTGATCGTTACTTATCCTTAAATACTTGAGTTGCTGATTGAACTGAGCATGTAGGAACTCTGTACGAGTTTATTGTTTGATTGATATCTAAGAATCAGAGATTGAAGAGGGATGGGAACAGGGTATAATAGCATTTTCAGTATATAATTGAATTGTTTCAGATTTCTAGTTGGACTTGTATAATCTAACAGAGTAATTGAATTTAGGCATAATCTACGGGGAATCATGAACCTCCATAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCATCGGTTTGCTTTTGGTTTCTCCGAAAGCTCTCGTGCCAATGGAGATGTACTCTTAATTAGCCAACGTGGGACTCCCTCCCAACAATCCTCCCTTCGAGAAAAGTACACCATAGAGTCTCCTTTGAGGCCTATGGAGCCCTCGAACAGCCTCCCCTTAATCGAGGATTGACTACTTTCTCTAGAGCCCTCGAACTAAGTACACCATTTGTTTGACACTTGAGTCACTTTTGATTACACCTCCGAGGCTCACCACTTCTTTGTTCAAAATTTGAGGATTCTATTGACCTGACTAAGTTAAGGGCATAACTTTGATACCATGTTAGAAACTACGGAATCAAGTTGTAATTGTATGAGCTCAATAGGGTACCATTTGTAACATGACTCTAATACCATATTAGGAATCACAAACCTCCACAATGGTATGGTATTGTCAACTTTGAGCATAAGCTCTCATGGTTTTGTTTTTGGTTTCCACAAAAGGCCTCATACCAATGGAGATAGTGTTCCTTATAAACCCATGATCTTCCTCTTAATTAGTTAATGTGGGGACTACTCTTTTCAATAATCCTCAACAATTGTTGAGAATTGTTGGGAGAGGAGTCCCGCATCGGCTGGGTGATCATGAGTTTATAAGTAAGGAACACTATCTCCATTGGTATGAGGCCTTTTGGGGAAACCAACAACAAAGCCATAAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGGTCGTAGTTCGTAACAACATTGGAGTTTTACACGCTTTAGTATGATATTAAAGCTAGACATACCACTGAAAATTTCATTTCTTTCCCGATTAATATTGATAATTTGTTATCATGGACAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAGTCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTTAGTGTCATAAATTCACACTACTCAACCTCCATACTTCTTGAACTTGAGCTCTTAGTATAAGATATATGATTTTCATATTGAGTATTTTTAAATGATAATATTTGAAAATGTGGACTACCTAGATTATTGTATGAATCATATTGCCGTCTAGGACATGTCATATAGTTTCTAAAACTTGCTAATTTTGTATTTCCTATCATCTTTCTTGCACACCAATTACTGGGGATATTGATTTGTTTTACATGTTTGAATTTCTTTCGGAACGCGAGGATTATTGGATTGTTCAATTGATTGTTAGGAATCATGGACTTTCACAATGGTACGATATTATCCACTTTGAGCATAAGCTCTCATGTCTTTGCTTTTGGTTTCCCCAAAAGGTCTCGTACCAATGGAAATACTATTCCTTCCTTATAAACTCATGATCTTCTGTTTAATTAGCTAACGTGGGACTCCCTCCCATCAATCCTCAACAATCCTCCCCTCGAACAAAATACACCATAGAGCCTGGCCTATGTAGCCCTCGAACAACCTCCCCTTACTCGAGGCACGACTCCTTCTCTGAAGACTTCGAACAAAGTACACCCATTGTTCGACATTTGAGTCACTTTTGACTACATACTCGAGGCTCACAACTTCTTTGTTTGACATTTGAGGATTCTCCAGACATGACTAAGTTAAGGGCATGACTCGAATACCATGTTAGGAACTATGGACCTCCACAATCGTATGATATTGTCCACTTTAAGCATAAGTTCTCATGATTTTGCTTTTGGTTTCCCCAAAAGGCCTCGTACTAATAAAGATAGTATTCCTTACTTATAAACCAATTATCTTCCCCTTAATTAGCCAACATGGGTCTCCCTCCCAACGATCCTCAACATTGATTTCTCTCTTTTATCTTTCTTTCTTTTTTCATTCATTCACTAGAAATTTGGCATTTGAAATATTAAACCATACCATCTTGGTATAGCAAACAAAACAATTCAACACTGTACTGAAAACAAAGAAGCCTTAAAAGTAGCTATATATATATATATATATATATATATATATATATATATGTAGCTACTTTTGATGCTTCAATCCCTAAGCTTATGTTCTCAATCATTGTAAGACTTGCAATAACAAGTAAAAGAAAAACAATACACTAACAATTGTTGTTCCTTTAATTTTTAGGTTCTGAATGCAAAAGATGGTTCTAATGATAATTCTTTCCTACTCTTATCTTACATTCTCAGCAAGTGCCGTAACGCTTGTTAAAATCTTGATTATTAGGTGTTGAGGCTTATATGTTGTATCAATATTTTGCCAGTCCTGAAATGCTAGATTTTTTTGTAAATTTAGGCATAGAACTCTTCATGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTGGGGCTTCCCCTCAAGGCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACTAATGTGGGACATCACATTCTACCCCCTTTCGGGGCCCAGCATCCTCACTGGGCACTCTTTCCTTCCTCCAATCGACCTGGGCCGTTACACTCCAACTTATAAATATATTTGATTTCACGATGAAAATATAGTTCTTTGAGAAGAGATAGAAAGAAGACCAAAGAAACGAGTTCAGTGTTGCAAGAGAGAAGAAGAACAAAAGACACATGCACCTAGAGTCACTACCACATGCATGACATAACTTCTTTATGCGGAAATATTCATTAGGATCGTTATGCATATGGTAGTGGCCGAATGTTTTCGCATAAAAAGATTATGTCATGCATATAGTAGCGGTTCTATTTCCCTCTTGAAATTATGATTGTTACACGTATTCTCTGAGGATATCTGTAGTTTCCATGACTTACGTGAACAACGCTGGTTATTTACAGGTCAAGGTGCTATAGGAGGAGACGTTTCATGA

mRNA sequence

ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCACTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAGTCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTCAAGGTGCTATAGGAGGAGACGTTTCATGA

Coding sequence (CDS)

ATGGATTCCTTACTCTCTTTAATGGCGTCCAATGCGCCTCTCTTCACTTCTCCCCCCATCACTCTCAGCTTCTCCAGACCCAATTTCACCCACCCCACCTTCATTTCCCCTTTCTCTGTTACCTCTTCTTTCTCGCTGCGCACTGCTGCTCCGCCCATCCACCGTCCTTCCAAATTCATCCCGATCTCTGCTTCTGGCAATGGTAATGACGGTGTTCGTGGAGACGGCGGCGGTGGCGATGACGACTCGAAATTGCTTGATGGAGAAGCTGAGGATAATGCGACGCTGTCCGCGGATGCGATCGTTCTGGATGTTGGAGGGATGATGTGCACGGGGTGTTCCACGAGTGTCAAGAGGATTCTTGAAAGTCAGCCGCCAGTATCGCATGCTACTGTTGACCTTGCTTCAGAGACAGCATTCGTGTGGCTTGTAGCTGAAGCAAAAGTCACACCCAACTGGCGGGAGGAGCTGGGGGAGGCACTTGCAAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGCTCAAGGTCAAGGTGCTATAGGAGGAGACGTTTCATGA

Protein sequence

MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFIPISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAIGGDVS

Homology

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BLAST of Csor.00g261780 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of Csor.00g261780 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.5e-07
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKVTPNWREELGEALAKHLTTCGFSSKAQGQG 179
           E +VT     +  E+LAK LT  GF +K +  G
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAKRRVSG 151

[Close]

BLAST of Csor.00g261780 vs. NCBI nr
Match: KAG6588770.1 (Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 363 bits (931), Expect = 2.54e-126
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAI 180
           LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAI
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAI 180

Query: 181 GGDVS 185
           GGDVS
Sbjct: 181 GGDVS 185

[Close]

BLAST of Csor.00g261780 vs. NCBI nr
Match: XP_022988963.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 359 bits (922), Expect = 5.99e-125
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPF+VTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFTVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAI 180
           LESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKA GQGAI
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAHGQGAI 180

Query: 181 GGDVS 185
           GGDVS
Sbjct: 181 GGDVS 185

[Close]

BLAST of Csor.00g261780 vs. NCBI nr
Match: XP_022927930.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 356 bits (914), Expect = 1.03e-123
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGE-AEDNATLSADAIVLDVGGMMCTGCSTSVKR 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGE AEDNATLSAD IVLDVGGMMCTGCSTSVKR
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEEAEDNATLSADVIVLDVGGMMCTGCSTSVKR 120

Query: 121 ILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGA 180
           ILESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKAQGQGA
Sbjct: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQGQGA 180

Query: 181 IGGDVS 185
           IGGDVS
Sbjct: 181 IGGDVS 186

[Close]

BLAST of Csor.00g261780 vs. NCBI nr
Match: XP_023529553.1 (copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349 bits (895), Expect = 8.42e-121
Identity = 180/187 (96.26%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSP ITLSFSRPNFTHPTFISPFSVTS FSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPTITLSFSRPNFTHPTFISPFSVTSPFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGG--DDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 120
           PISASGN NDGVRGDGGGG  DDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK
Sbjct: 61  PISASGNSNDGVRGDGGGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 120

Query: 121 RILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQG 180
           +ILESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKAQGQG
Sbjct: 121 KILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQGQG 180

Query: 181 AIGGDVS 185
           AIGGDVS
Sbjct: 181 AIGGDVS 187

[Close]

BLAST of Csor.00g261780 vs. NCBI nr
Match: KAG7022542.1 (Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344 bits (882), Expect = 5.48e-119
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLF+SPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFSSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQG 176
           LESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKAQG
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQG 176

[Close]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL
Match: A0A6J1JNV4 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486165 PE=4 SV=1)

HSP 1 Score: 359 bits (922), Expect = 2.90e-125
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPF+VTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFTVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVKRI 120

Query: 121 LESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGAI 180
           LESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKA GQGAI
Sbjct: 121 LESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAHGQGAI 180

Query: 181 GGDVS 185
           GGDVS
Sbjct: 181 GGDVS 185

[Close]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL
Match: A0A6J1EQ92 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434685 PE=4 SV=1)

HSP 1 Score: 356 bits (914), Expect = 4.99e-124
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI
Sbjct: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60

Query: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGE-AEDNATLSADAIVLDVGGMMCTGCSTSVKR 120
           PISASGNGNDGVRGDGGGGDDDSKLLDGE AEDNATLSAD IVLDVGGMMCTGCSTSVKR
Sbjct: 61  PISASGNGNDGVRGDGGGGDDDSKLLDGEEAEDNATLSADVIVLDVGGMMCTGCSTSVKR 120

Query: 121 ILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQGA 180
           ILESQPPVSHATVDLASETAFVWLVAEAK+TPNWREELGEALAKHLTTCGFSSKAQGQGA
Sbjct: 121 ILESQPPVSHATVDLASETAFVWLVAEAKITPNWREELGEALAKHLTTCGFSSKAQGQGA 180

Query: 181 IGGDVS 185
           IGGDVS
Sbjct: 181 IGGDVS 186

[Close]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 4.09e-84
Identity = 145/196 (73.98%), Postives = 152/196 (77.55%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLFT   IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDDD--------SKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+A LSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCG 180
           C GCS SVKRILESQP VSHA+VDLASETA VW  AEAK+TPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKAQGQGAIGGDVS 185
           FSSK QGQGAIGGDVS
Sbjct: 181 FSSKVQGQGAIGGDVS 195

[Close]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 1.93e-82
Identity = 143/196 (72.96%), Postives = 151/196 (77.04%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLF    IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTLNFTHSPSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDDD--------SKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+ATLSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCG 180
           C GCS SVKRILESQP VS+A+VDLASETA VW  AEAK+TPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKAQGQGAIGGDVS 185
           FSSK QGQGAIGG VS
Sbjct: 181 FSSKVQGQGAIGGGVS 195

[Close]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL
Match: A0A6J1HI09 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 3.40e-78
Identity = 137/188 (72.87%), Postives = 144/188 (76.60%), Query Frame = 0


Query: 1   MDSLLSLMASNAPLFTSPPITLSFSRPNFTHPTFISPFSVTSSFSLRTAAPPIHRPSKFI 60
           MDS LS+MASNAPLFT   IT SFS  NFTH   ISP S T SFSLR A PP+HR  KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTLNFTHSLSISPIS-TLSFSLRAAVPPLHRRHKFI 60

Query: 61  PISASGNGNDGVRGD---GGGGDDD--------SKLLDGEAEDNATLSADAIVLDVGGMM 120
             S+SGNGN GVRG+   GGGGDD         S LL GEAED+A LSADAIVL VGGM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CTGCSTSVKRILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCG 177
           C GCS SVKRILESQP VSHA+VDLASETA VW  AEAK+TPNWREELGEALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

[Close]

BLAST of Csor.00g261780 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSSKAQGQ 178
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S  +G+
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQSTPRGE 226

[Close]

BLAST of Csor.00g261780 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-25
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of Csor.00g261780 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-25
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 63  SASGNGNDGVRGDGGG----GDDDSKLLDGEAEDNATLSADAIVLDVGGMMCTGCSTSVK 122
           S  G  N G  G GGG    GD  SKL    ++  +  S+D I+LDVGGM C GCS SVK
Sbjct: 108 SGFGGYNGGSGGGGGGGSESGDSKSKLGANASDGVSVPSSDIIILDVGGMTCGGCSASVK 167

Query: 123 RILESQPPVSHATVDLASETAFVWLVAEAKVTPNWREELGEALAKHLTTCGFSS 173
           +ILESQP V+ A+V+L +ETA VW V EAK  P+W++ LGE LA HLT CGF S
Sbjct: 168 KILESQPQVASASVNLTTETAIVWPVPEAKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of Csor.00g261780 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKVTPNWREELGEALAKHLTTCGFSSKAQGQG 179
           E +VT     +  E+LAK LT  GF +K +  G
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAKRRVSG 151

[Close]

BLAST of Csor.00g261780 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 87  DGEAEDNATLSADA-IVLDVGGMMCTGCSTSVKRILESQPPVSHATVDLASETAFVWLVA 146
           +   E   ++++D  I+LDV GMMC GC   VK +L S   V+ A V++ +ETA V    
Sbjct: 63  ESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKP 122

Query: 147 EAKVTPNWREELGEALAKHLTTCGFSSKAQGQG 179
           E +VT     +  E+LAK LT  GF +K +  G
Sbjct: 123 EVEVT----ADTAESLAKRLTESGFEAKRRVSG 151

The following BLAST results are available for this feature:

BLAST of Csor.00g261780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZC9	1.2e-23	54.39	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B9DFX7	4.5e-07	38.71	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Csor.00g261780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588770.1	2.54e-126	100.00	Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma ...	[more]
XP_022988963.1	5.99e-125	98.38	copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022927930.1	1.03e-123	98.39	copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023529553.1	8.42e-121	96.26	copper-transporting ATPase PAA1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022542.1	5.48e-119	98.86	Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma ...	[more]

BLAST of Csor.00g261780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNV4	2.90e-125	98.38	copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EQ92	4.99e-124	98.39	copper-transporting ATPase PAA1, chloroplastic-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1HFH1	4.09e-84	73.98	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HX97	1.93e-82	72.96	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1HI09	3.40e-78	72.87	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita mosc...	[more]

BLAST of Csor.00g261780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33520.1	1.7e-25	52.94	P-type ATP-ase 1	[more]
AT4G33520.2	8.3e-25	54.39	P-type ATP-ase 1	[more]
AT4G33520.3	8.3e-25	54.39	P-type ATP-ase 1	[more]
AT5G21930.1	3.2e-08	38.71	P-type ATPase of Arabidopsis 2	[more]
AT5G21930.2	3.2e-08	38.71	P-type ATPase of Arabidopsis 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 102..162 e-value: 9.5E-8 score: 32.3
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 100..174 score: 13.635805
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 102..163 e-value: 5.83381E-11 score: 53.7637
None	No IPR available	GENE3D	3.30.70.100		coord: 98..174 e-value: 3.9E-14 score: 54.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..87
None	No IPR available	PANTHER	PTHR43520:SF22	COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC	coord: 86..174
None	No IPR available	PANTHER	PTHR43520	ATP7, ISOFORM B	coord: 86..174
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 105..134
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 101..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g261780.m01	Csor.00g261780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055070	copper ion homeostasis
cellular_component	GO:0016020	membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0043682	P-type divalent copper transporter activity
molecular_function	GO:0046872	metal ion binding