Csor.00g261660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g261660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhloem filament protein
LocationCsor_Chr11: 11196245 .. 11196607 (-)
RNA-Seq ExpressionCsor.00g261660
SyntenyCsor.00g261660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGATGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGGAGGACTACAACCTCGTACATAAGGAGAGTTTCAAATACAAGAGCATTAAATGTGGTTGGTTTATGGAGCTGAAGGGTGAAGACCTGGCCTACCGCCTCCATATTGAGGTGAAAGACTGTTTGGGACGTATTTTTGAATTGAATGTCGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTAA

mRNA sequence

ATGGCAGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGATGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGGAGGACTACAACCTCGTACATAAGGAGAGTTTCAAATACAAGAGCATTAAATGTGGTTGGTTTATGGAGCTGAAGGGTGAAGACCTGGCCTACCGCCTCCATATTGAGGTGAAAGACTGTTTGGGACGTATTTTTGAATTGAATGTCGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTAA

Coding sequence (CDS)

ATGGCAGTGGTTGCTCAGATTGCTTCAAATGACCCAATCAGTCAATTGAAGATTGATGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGGAGGACTACAACCTCGTACATAAGGAGAGTTTCAAATACAAGAGCATTAAATGTGGTTGGTTTATGGAGCTGAAGGGTGAAGACCTGGCCTACCGCCTCCATATTGAGGTGAAAGACTGTTTGGGACGTATTTTTGAATTGAATGTCGTAGTTTCTGAAAAGAAAACATGTGCTGAAAAGATCAGAAAGCTTGAATCGGCAAAACTTATTAAGAAGAATTAA

Protein sequence

MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN
Homology
BLAST of Csor.00g261660 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242 bits (618), Expect = 1.04e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60
           MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60

Query: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120
           KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261660 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234 bits (597), Expect = 1.66e-77
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60
           MAVVAQ+A NDPISQLKIDGCLICPSKWIQIPDVSEVCVQN+AKFAVEDYNLVHKESFKY
Sbjct: 1   MAVVAQVALNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNVAKFAVEDYNLVHKESFKY 60

Query: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120
           KSIKCGWFMELKGEDLAYRLH+EVKDCLGRIF L+VVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHVEVKDCLGRIFVLDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261660 vs. NCBI nr
Match: KAG6588759.1 (hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (594), Expect = 4.75e-77
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60
           MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLHI VKDCLGRIFEL+VVVSEKKTCAEKIRKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261660 vs. NCBI nr
Match: KAG6588755.1 (hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231 bits (589), Expect = 2.75e-76
Identity = 112/120 (93.33%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60
           MAVVAQI SNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLHI VKDCLGRIFEL+VVVSEKKTCAEK+RKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120

BLAST of Csor.00g261660 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (585), Expect = 1.12e-75
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0

Query: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60
           MAVVA IASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAHIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120
           KSIKCGWFMELKGEDLA+ LHIEVKDCLGRIFEL+VVVSEKK C EK+RKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAFHLHIEVKDCLGRIFELDVVVSEKKACGEKVRKLESAKLIKKN 120

BLAST of Csor.00g261660 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.28e-18
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGEDLAYRLHIEVKD 86
           KWI+IPDV+  C+Q +AKFAVE +N  H +   Y SI  GW++EL   +L YRLHI+  D
Sbjct: 16  KWIKIPDVNGHCLQQVAKFAVEKFNAEHGDCLIYNSIFEGWYLELGSNNLKYRLHIKAVD 75

Query: 87  CLGRIFELNVVVSEKKTCAEKIRKLESAKLI 117
            LGR+    VVV E+K   E+IRKL S  +I
Sbjct: 76  FLGRLLIYEVVVFEEKPDKERIRKLISFVII 106

BLAST of Csor.00g261660 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.39e-18
Identity = 46/87 (52.87%), Postives = 55/87 (63.22%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGEDLAYRLHIEVKD 86
           KWI+IPDVS  CVQ +AK AVE +N+ H  S KY+SI  GWF EL   +L YRLHI   D
Sbjct: 16  KWIKIPDVSSHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWFCELGQNNLKYRLHIRAID 75

Query: 87  CLGRIFELNVVVSEKKTCAEKIRKLES 113
            L R      +V E+K   E+IRKL S
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLIS 102

BLAST of Csor.00g261660 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.76e-17
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AVE +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLES 113
           L YRLHI   D L R      +V E+K   E+IRKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261660 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.76e-17
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AVE +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLES 113
           L YRLHI   D L R      +V E+K   E+IRKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261660 vs. ExPASy TrEMBL
Match: A0A6J1EJ75 (uncharacterized protein LOC111434636 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.77e-17
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKYKSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AVE +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLES 113
           L YRLHI   D L R      +V E+K   E+IRKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588758.11.04e-80100.00hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588757.11.66e-7795.00hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588759.14.75e-7795.00hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588755.12.75e-7693.33hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023522970.11.12e-7592.50uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1EIQ81.28e-1850.55uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1ELQ99.39e-1852.87uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1EQ391.76e-1747.96uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EI901.76e-1747.96uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1EJ751.77e-1747.96uncharacterized protein LOC111434636 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 38..113
e-value: 3.2E-24
score: 84.8
NoneNo IPR availableGENE3D3.10.450.10coord: 23..117
e-value: 1.3E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR47116:SF5PHLOEM FILAMENT PROTEINcoord: 25..118
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 28..111
IPR027214CystatinPANTHERPTHR47116PHLOEM FILAMENT PROTEINcoord: 25..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g261660.m01Csor.00g261660.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity