Csor.00g261640 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g261640
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhloem filament protein
LocationCsor_Chr11: 11184979 .. 11185338 (-)
RNA-Seq ExpressionCsor.00g261640
SyntenyCsor.00g261640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCAGTTGTCCATGCTCCAAATGACCCAATCAATCAATTGAAGATTGATGGAAACCTCCTTTGTCCAAGTAAGTGGATACCAATTCCTAATGTATCCGAGATCTGCGTGCAAAATGTTGCAAAGTTTGCTGTGGAGGATTACAACCTTGAACATAAGGAGAGTTTCAAATATAAGAATATTAAATGTGGTTGGTTTATGGAGCTCAAGGGTGAAGACCTGGCCTTCCGCCTCCATGTTGAGGTGAAAGATTGTCTGGGACGTGTCTTTGAGATGGATGTCGTCGTGTCTGAAAAGAAAGTCTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCCAAACTTATTAAAAAACACTGA

mRNA sequence

ATGGCCGCAGTTGTCCATGCTCCAAATGACCCAATCAATCAATTGAAGATTGATGGAAACCTCCTTTGTCCAAGTAAGTGGATACCAATTCCTAATGTATCCGAGATCTGCGTGCAAAATGTTGCAAAGTTTGCTGTGGAGGATTACAACCTTGAACATAAGGAGAGTTTCAAATATAAGAATATTAAATGTGGTTGGTTTATGGAGCTCAAGGGTGAAGACCTGGCCTTCCGCCTCCATGTTGAGGTGAAAGATTGTCTGGGACGTGTCTTTGAGATGGATGTCGTCGTGTCTGAAAAGAAAGTCTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCCAAACTTATTAAAAAACACTGA

Coding sequence (CDS)

ATGGCCGCAGTTGTCCATGCTCCAAATGACCCAATCAATCAATTGAAGATTGATGGAAACCTCCTTTGTCCAAGTAAGTGGATACCAATTCCTAATGTATCCGAGATCTGCGTGCAAAATGTTGCAAAGTTTGCTGTGGAGGATTACAACCTTGAACATAAGGAGAGTTTCAAATATAAGAATATTAAATGTGGTTGGTTTATGGAGCTCAAGGGTGAAGACCTGGCCTTCCGCCTCCATGTTGAGGTGAAAGATTGTCTGGGACGTGTCTTTGAGATGGATGTCGTCGTGTCTGAAAAGAAAGTCTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCCAAACTTATTAAAAAACACTGA

Protein sequence

MAAVVHAPNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH
Homology
BLAST of Csor.00g261640 vs. NCBI nr
Match: KAG6588756.1 (hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246 bits (628), Expect = 2.87e-82
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MAAVVHAPNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYK 60
           MAAVVHAPNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYK
Sbjct: 1   MAAVVHAPNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYK 60

Query: 61  NIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119
           NIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH
Sbjct: 61  NIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119

BLAST of Csor.00g261640 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207 bits (528), Expect = 5.31e-67
Identity = 99/120 (82.50%), Postives = 110/120 (91.67%), Query Frame = 0

Query: 1   MAAVVH-APNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKY 60
           MA V H A NDPI+QLKIDG L+CPSKWI IP+VSE+CVQN+AKFAV+DYNL HKESFKY
Sbjct: 1   MAVVAHIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  KNIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119
           K+IKCGWFMELKGEDLAF LH+EVKDCLGR+FE+DVVVSEKK C EKVRKLESAKLIKK+
Sbjct: 61  KSIKCGWFMELKGEDLAFHLHIEVKDCLGRIFELDVVVSEKKACGEKVRKLESAKLIKKN 120

BLAST of Csor.00g261640 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206 bits (524), Expect = 2.16e-66
Identity = 98/120 (81.67%), Postives = 111/120 (92.50%), Query Frame = 0

Query: 1   MAAVVH-APNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKY 60
           MA V   A NDPI+QLKIDG L+CPSKWI IP+VSE+CVQN+AKFAVEDYNL HKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60

Query: 61  KNIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119
           K+IKCGWFMELKGEDLA+RLH+EVKDCLGR+FE++VVVSEKK CAEK+RKLESAKLIKK+
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261640 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205 bits (522), Expect = 4.37e-66
Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 0

Query: 1   MAAVVH-APNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKY 60
           MA V   A NDPI+QLKIDG L+CPSKWI IP+VSE+CVQNVAKFAVEDYNL HKESFKY
Sbjct: 1   MAVVAQVALNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNVAKFAVEDYNLVHKESFKY 60

Query: 61  KNIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119
           K+IKCGWFMELKGEDLA+RLHVEVKDCLGR+F +DVVVSEKK CAEK+RKLESAKLIKK+
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHVEVKDCLGRIFVLDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261640 vs. NCBI nr
Match: KAG6588759.1 (hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203 bits (517), Expect = 2.53e-65
Identity = 97/120 (80.83%), Postives = 110/120 (91.67%), Query Frame = 0

Query: 1   MAAVVH-APNDPINQLKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKY 60
           MA V   A NDPI+QLKIDG L+CPSKWI IP+VSE+CVQN+AKFAV+DYNL HKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  KNIKCGWFMELKGEDLAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLESAKLIKKH 119
           ++IKCGWFMELKGEDLAFRLH+ VKDCLGR+FE+DVVVSEKK CAEK+RKLESAKLIKK+
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261640 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.20e-17
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0

Query: 26  KWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGEDLAFRLHVEVKD 85
           KWI IP+V+  C+Q VAKFAVE +N EH +   Y +I  GW++EL   +L +RLH++  D
Sbjct: 16  KWIKIPDVNGHCLQQVAKFAVEKFNAEHGDCLIYNSIFEGWYLELGSNNLKYRLHIKAVD 75

Query: 86  CLGRVFEMDVVVSEKKVCAEKVRKLESAKLI 116
            LGR+   +VVV E+K   E++RKL S  +I
Sbjct: 76  FLGRLLIYEVVVFEEKPDKERIRKLISFVII 106

BLAST of Csor.00g261640 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.28e-17
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 15  LKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGED 74
           +K+ G +    KWI IP+VS  CVQ VAK AVE +N++H  S KY++I  GWF EL   +
Sbjct: 5   VKVCGQVPGVEKWIKIPDVSSHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWFCELGQNN 64

Query: 75  LAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLES 112
           L +RLH+   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKLIS 102

BLAST of Csor.00g261640 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.04e-17
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 15  LKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGED 74
           +K+ G +    KWI IP+VS  CVQ VAK AVE +N++H  S KY++I  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 75  LAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLES 112
           L +RLH+   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261640 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.04e-17
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 15  LKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGED 74
           +K+ G +    KWI IP+VS  CVQ VAK AVE +N++H  S KY++I  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 75  LAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLES 112
           L +RLH+   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261640 vs. ExPASy TrEMBL
Match: A0A6J1EJ75 (uncharacterized protein LOC111434636 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.09e-17
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 15  LKIDGNLLCPSKWIPIPNVSEICVQNVAKFAVEDYNLEHKESFKYKNIKCGWFMELKGED 74
           +K+ G +    KWI IP+VS  CVQ VAK AVE +N++H  S KY++I  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 75  LAFRLHVEVKDCLGRVFEMDVVVSEKKVCAEKVRKLES 112
           L +RLH+   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588756.12.87e-82100.00hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023522970.15.31e-6782.50uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo][more]
KAG6588758.12.16e-6681.67hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588757.14.37e-6683.33hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588759.12.53e-6580.83hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EIQ82.20e-1747.25uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1ELQ94.28e-1744.90uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1EQ398.04e-1743.88uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EI908.04e-1743.88uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1EJ758.09e-1743.88uncharacterized protein LOC111434636 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 22..116
e-value: 4.1E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR47116:SF5PHLOEM FILAMENT PROTEINcoord: 25..117
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 26..110
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 37..112
e-value: 2.8E-24
score: 85.0
IPR027214CystatinPANTHERPTHR47116PHLOEM FILAMENT PROTEINcoord: 25..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g261640.m01Csor.00g261640.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity