Csor.00g261630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g261630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPhloem filament protein
LocationCsor_Chr11: 11180404 .. 11180766 (-)
RNA-Seq ExpressionCsor.00g261630
SyntenyCsor.00g261630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGGTTGCTCAGATTACTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGCAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACGTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCAAAACTTATTAAGAAAAACTGA

mRNA sequence

ATGGCAGTGGTTGCTCAGATTACTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGCAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACGTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCAAAACTTATTAAGAAAAACTGA

Coding sequence (CDS)

ATGGCAGTGGTTGCTCAGATTACTTCAAATGACCCAATCAGTCAATTGAAGATTGACGGATGCCTCATTTGTCCAAGCAAGTGGATACAAATTCCTGATGTCTCAGAGGTCTGCGTGCAAAATATTGCAAAGTTTGCTGTGCAGGACTACAACCTCATACATAAGGAGAGTTTCAAATACCAGAGCATTAAATGTGGTTGGTTCATGGAGCTGAAGGGTGAAGACCTGGCCTTCCGCCTCCATATTGTGGTGAAAGACTGTTTGGGACGTATCTTTGAACTGGATGTTGTAGTTTCTGAAAAGAAAACGTGTGCTGAAAAAGTCAGAAAGCTTGAATCTGCAAAACTTATTAAGAAAAACTGA

Protein sequence

MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN
Homology
BLAST of Csor.00g261630 vs. NCBI nr
Match: KAG6588755.1 (hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (614), Expect = 4.22e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120
           QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120

BLAST of Csor.00g261630 vs. NCBI nr
Match: KAG6588759.1 (hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238 bits (608), Expect = 3.48e-79
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQI SNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120
           QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEK+RKLESAKLIKKN
Sbjct: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261630 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230 bits (586), Expect = 7.89e-76
Identity = 112/120 (93.33%), Postives = 118/120 (98.33%), Query Frame = 0

Query: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQI SNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVEDYNLVHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLHI VKDCLGRIFEL+VVVSEKKTCAEK+RKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHIEVKDCLGRIFELNVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261630 vs. NCBI nr
Match: XP_023522970.1 (uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (580), Expect = 6.49e-75
Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0

Query: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVA I SNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY
Sbjct: 1   MAVVAHIASNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLAF LHI VKDCLGRIFELDVVVSEKK C EKVRKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAFHLHIEVKDCLGRIFELDVVVSEKKACGEKVRKLESAKLIKKN 120

BLAST of Csor.00g261630 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (575), Expect = 3.76e-74
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0

Query: 1   MAVVAQITSNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKY 60
           MAVVAQ+  NDPISQLKIDGCLICPSKWIQIPDVSEVCVQN+AKFAV+DYNL+HKESFKY
Sbjct: 1   MAVVAQVALNDPISQLKIDGCLICPSKWIQIPDVSEVCVQNVAKFAVEDYNLVHKESFKY 60

Query: 61  QSIKCGWFMELKGEDLAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLESAKLIKKN 120
           +SIKCGWFMELKGEDLA+RLH+ VKDCLGRIF LDVVVSEKKTCAEK+RKLESAKLIKKN
Sbjct: 61  KSIKCGWFMELKGEDLAYRLHVEVKDCLGRIFVLDVVVSEKKTCAEKIRKLESAKLIKKN 120

BLAST of Csor.00g261630 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.95e-17
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKD 86
           KWI+IPDV+  C+Q +AKFAV+ +N  H +   Y SI  GW++EL   +L +RLHI   D
Sbjct: 16  KWIKIPDVNGHCLQQVAKFAVEKFNAEHGDCLIYNSIFEGWYLELGSNNLKYRLHIKAVD 75

Query: 87  CLGRIFELDVVVSEKKTCAEKVRKLESAKLI 117
            LGR+   +VVV E+K   E++RKL S  +I
Sbjct: 76  FLGRLLIYEVVVFEEKPDKERIRKLISFVII 106

BLAST of Csor.00g261630 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.86e-16
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 27  KWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKD 86
           KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GWF EL   +L +RLHI   D
Sbjct: 16  KWIKIPDVSSHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWFCELGQNNLKYRLHIRAID 75

Query: 87  CLGRIFELDVVVSEKKTCAEKVRKLES 113
            L R    + +V E+K   E++RKL S
Sbjct: 76  FLQRSLLYEALVFEEKPKLERIRKLIS 102

BLAST of Csor.00g261630 vs. ExPASy TrEMBL
Match: A0A0A0K3W6 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.71e-16
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0

Query: 28  WIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGEDLAFRLHIVVKDC 87
           WI+IPDV + CVQ+ AK+AV ++N I  +   Y S   GW+ E+    + F+LHI  K+C
Sbjct: 109 WIKIPDVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKEC 168

Query: 88  LGRIFELDVVVSEKKTCAEKVRKLESAKLI 117
           +GR+ +   VV E+K   EK++KLE   LI
Sbjct: 169 IGRVRDYIAVVKEEKPLTEKIKKLEDFYLI 198

BLAST of Csor.00g261630 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.38e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLES 113
           L +RLHI   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

BLAST of Csor.00g261630 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.38e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0

Query: 16  LKIDGCLICPSKWIQIPDVSEVCVQNIAKFAVQDYNLIHKESFKYQSIKCGWFMELKGED 75
           +K+ G +    KWI+IPDVS  CVQ +AK AV+ +N+ H  S KY+SI  GW+ EL   +
Sbjct: 5   VKVCGQVPAEEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYESIHEGWYCELGQNN 64

Query: 76  LAFRLHIVVKDCLGRIFELDVVVSEKKTCAEKVRKLES 113
           L +RLHI   D L R    + +V E+K   E++RKL S
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKFERIRKLIS 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588755.14.22e-80100.00hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588759.13.48e-7998.33hypothetical protein SDJN03_17324, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588758.17.89e-7693.33hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023522970.16.49e-7594.17uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo][more]
KAG6588757.13.76e-7490.00hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EIQ85.95e-1747.25uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A6J1ELQ92.86e-1649.43uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
A0A0A0K3W63.71e-1643.33Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1[more]
A0A6J1EQ395.38e-1644.90uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EI905.38e-1644.90uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC1114345... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 38..113
e-value: 3.4E-23
score: 81.5
NoneNo IPR availableGENE3D3.10.450.10coord: 23..117
e-value: 3.2E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR47116:SF5PHLOEM FILAMENT PROTEINcoord: 25..118
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 28..110
IPR027214CystatinPANTHERPTHR47116PHLOEM FILAMENT PROTEINcoord: 25..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g261630.m01Csor.00g261630.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity