Csor.00g260880 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAATGTGGACCTGGGGATTGAGGGGCAGCCTATAGAAGGAACTGCTCCAGCAGTGGCGGTTCCGGAGCCTACTTCTCAGTCGGCATCTAGGGATCAGCCGACTGTTATTATTACTCTGGAGGCCTTGCAATCGCTGATTCAAAGTTAAGTGAATCAAGCGGTGCAGAGCCGAGTGGATTAGGTGGTACAGATAGCTTTTGCTGGTTTTGGAAGGTGGGCGGCTCCGACAGCACCTGTACCTAGCCATGTGACTCTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCAATACCTCCAACAATTTCGAAGGAGCTACCTGGTACAACGGTAGTGACAGAGGCACCACTACGGGTAGTAACCTATGGGCGATGA ATGTCCAATGTGGACCTGGGGATTGAGGGGCAGCCTATAGAAGGAACTGCTCCAGCAGTGGCGGTTCCGGAGCCTACTTCTCAGTCGGCATCTAGGGATCAGCCGACTGTTATTATTACTCTGGAGGCCTTGCAATCGCTGATTCAAACACCTGTACCTAGCCATGTGACTCTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCAATACCTCCAACAATTTCGAAGGAGCTACCTGGTACAACGGTAGTGACAGAGGCACCACTACGGGTAGTAACCTATGGGCGATGA ATGTCCAATGTGGACCTGGGGATTGAGGGGCAGCCTATAGAAGGAACTGCTCCAGCAGTGGCGGTTCCGGAGCCTACTTCTCAGTCGGCATCTAGGGATCAGCCGACTGTTATTATTACTCTGGAGGCCTTGCAATCGCTGATTCAAACACCTGTACCTAGCCATGTGACTCTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCAATACCTCCAACAATTTCGAAGGAGCTACCTGGTACAACGGTAGTGACAGAGGCACCACTACGGGTAGTAACCTATGGGCGATGA MSNVDLGIEGQPIEGTAPAVAVPEPTSQSASRDQPTVIITLEALQSLIQTPVPSHVTLVPEAQVGVQVAIPPTISKELPGTTVVTEAPLRVVTYGR Homology
BLAST of Csor.00g260880 vs. NCBI nr
Match: KAG6588680.1 (hypothetical protein SDJN03_17245, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179 bits (453), Expect = 2.65e-56 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g260880 vs. NCBI nr
Match: KAG6573685.1 (hypothetical protein SDJN03_27572, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169 bits (429), Expect = 1.21e-52 Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Csor.00g260880 vs. NCBI nr
Match: KAG6596973.1 (hypothetical protein SDJN03_10153, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163 bits (413), Expect = 3.60e-49 Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of Csor.00g260880 vs. NCBI nr
Match: KAG6573500.1 (hypothetical protein SDJN03_27387, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 158 bits (400), Expect = 3.22e-48 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Csor.00g260880 vs. NCBI nr
Match: KAG6573684.1 (hypothetical protein SDJN03_27571, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159 bits (402), Expect = 6.28e-48 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Csor.00g260880 vs. ExPASy TrEMBL
Match: A0A6J1EMJ0 (uncharacterized protein LOC111434816 OS=Cucurbita moschata OX=3662 GN=LOC111434816 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 8.18e-12 Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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