Csor.00g260030 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTTTCCATGAAAGATGATGTTCAAGGAAGCCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTGCAAGGTACGGTCGTGATCGTAGCCTGTTTACATGTTCTGATTGTGTAGCTTTTTGAATGGCTGTCGGCATATAGGCGTTGAAGTTTTGCGCTCCTGAACTGCGATGGAGTTTTTTTGAAACTTCTGTGTGTCAGCTAGACTGTGCTTAGGAGGACTTTTTATTGTTTCTTAGTTTTGAGTGAATTGATCGACAAAAGCAAAATCAACGTACTGCTAACTGCTATGCTTAATGGCTACATGCTACTGTTTATGGAATTCGTATTTGTTTTCATTGAACAATTGTTTCGGTTTGGGTTAAAATTTTCGTCATGTGTGAGTTAAGTAGAATTAGGCATGTGTATTTGATTGCTAGAGCTTAATTGTTTGTCCGAAGTAATATGTGCAAATACAGCACAATAATCATCAACCAGAAGGATAATAGAGAGGGCGAAGAATTGATCTTCCCAGAATGCTTTAAGTTTAGACGAGAAAGAAGGAAATACTCGAAATTTCTGAAGTCAAATCTGGGAAACATTTGAGTTTTGATTTTTGAGTTCGACATATACCCATGCTAGGGGCATGAGAGAAATCATAGAAAAACAGTTAAACTGTTTCAAGGTAAGTAAAAACTATCATTTTAGGTTAAACATGCCCAGAGACTAGACAGGTAAAGAACATAGTGGCCATTGGCAGAATCATCACCTCCAAACAACAAGGGGATCCTAATAACCTTTATCGAGCAGGACTTGAAGCTTTATCGACAAATTAATGAACTACTTTGAACAATTATTCTAATTATCTTTAATTGTTCACATTTAGTATATGTTATCTGCGTTGCAAAAATGCTAGTTTATGAATTCATCAGTTGTTTTCTCTTCTGTGAACAGATTTGGATGTTAAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGTCCAAATGAAATCCATGCAATACTATGTAACTACAAATATTTTGTCATCCATGTCAAGCCAGTGAACTTGCCCAAAAGTAATTTCGCGAGATTGTGCTCTGCAACTCCTTCCAACTCTATTTTACTAGTAATAAATTGTACTAAAAGATTTTTACTGTTTAATGTCTGATGCAAGTTATATCATATTCAATTATAAGTCTTCCTTGCATTTTGCATGATAATCACATTTATATTTCGATATTGAGTAATATAGAAAACTGGGTGTAGGCAGTGATGTCTCAGAAATCTAATGTTGGAAATGCGCAACAGGTGGAACCATTGTACTATTTGATCGCAAGATGCTTAGGAATTTTCGCAAAGATGGACATAATTGGAAGAAAAAAAAGGATGGAAAGACAGTAAAAGAAGCTCATGAACACCTAAAAGTGAGCATGTCTTGTTTTATTGGGCACTATTTCATAATTGAAAAGCTGGTGGAGACCTCAGATCTGTTTACATTCTTTACATATACATTTTTCTGACTCAGATGGTTGCATTTATGGCATATGGTTAATTCAATCTCCCCCCCTTGAAATGTTTAAACAAGGAACACAACACTCTTAAAGATTATCTGAAGATCTGATAAAAATATGTTGTCCTAGACTTAGTGGTGGCAGGTGAGGAAGTAAGTCGCGACTCTTTTAACGTTGAAGTCATCAATTAGTTCCAAATGGACTATTGGAATTTGTCTTTTGGTGGTATATACTAGCTTGACGTCTTTAAATTTTTGGAGTGACCAATGCTTAAATAGCTCGATGCTTTTGCATATTGTGAAAGAATTTGGTCAGATATGAGGAAGGGGTTTATGAGTTAGGTTACTTTCATTACCTTCAGCATTACCATTGATATATGTGGGTTCGTGTGTTTCTGTATAAATAATTTGGATGCTCGTTTTCTATAATATAATTTATATGTCCTTTTTCTCCACAAATTTGAAGTAATTTCTATTGTTTCTGCCAATATTCTCCAAAGCTTATTCGAAGTATAGTTGTATAATCATGTCTGTTCGGATATAGAATATATTAAATAGTTAAACTGAACGTAGTTAATCAGCTTAAGCATTTGAGTCTAGAGTCTATACGAGTGAAAAAATATATAAATTCAAACCCCTACAATTTTATTTCGTAGATCTTTTCAATTTTCTCAGTTATCATCTTCATTTCATATATCTTGTCTACTAGCTATGTCTCATTAATCAACCACCATACGATTCCACGATGTGAAGGGAAGTTGTTGGAGATCTTTTCTCGAGTCTATTGGTTGGTCAATGTCTACTATTAACTGTGTTTAGATTTATGGTAATTGTTCTTCTGTTATAGCATTAATCACCAAGAAAAAACGCTGTTTTTTGATTTTTTTTTTTCTTTTTCTTTGGCAGGTTGGTAATGTAGAAAGGATACATGTATACTATGCCCATGGCCTTGATAACCCAACCTTTGTTCGTCGATGTTATTGGCTCCTTGATAAGTATGTTATTGTTGAACTTACATTGGTATATTGGTTGCCACCAGTTGTTTTAGTGGGTTTATCCCAATAATGCCACTGGCAAAGAAAAATAAAATCAAACTGTGGCTGTATAGTATGTCAAATTTGTTTAGTTGATGATTTGTTGATGCTTTTTGTTTAGGTCTCTTGAACACGTTGTCCTTGTTCATTACCGCGAAACAAAAGAGGTTAGTTTCAGCATAATGCATCTGCAGCTATTGAAATATTATCATGAGATGAGCTTCTATCATTTTGGACTACTTCATCTATTTAAGATTTGCTGATTTTTCCTCCATGGCTATTATTATTTTCATTCAAAATAGTGTTATCTTATATTTCTTTAATGTTTTTTTCTTGTAGTCTGGTACCATATAGCAGTCGTGCATGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCATTCAAAAACTGGAAAATTACATGTTTGTGTTGTCTTTCGATGATTTAATCCAATATTTGTTGAGGATAAAGTCAACCATTGAATACATGTGTTTCCTACTACTCTTTTACATTTTAAGAATTCAACTTTCATCATGATTATTGCCTTTAAGTTTCTGTTAGTGCTACTCTAAATGCCATTGTAATTTATGTACCAATTTTATTACTCCGACTTAATTTTCAAAAATTAAGGCACCGCCTAGATGTAGAGTGCTATATGGTGCTTTGAGTGACAAGGATTCTCTTTGTTCTGATATGCATAAATTTTTCCTGGAACGGAAAAGACAATGATCGTGACACTATTTGATGGGAAAATATTCGTCCGATAATCAGTCTTCATATCATATGAATCAGCTCTGTAGTTCTTTATAGCGTATGGTTAAAGCTTCCTAACATTATGCTCATGATATTTCTATAGCATGCATTGGAACACTTCATGAACAACTTCTTCCATTTAGTCTTCTGTATTGAGAAAAATTTGCCGTACTAACTTCCTACTGCTGCCAGTGGCAGAGTTCTCCATCCACGTCGATGAATTCAAATTCTGGTTCTGTCTCTAACCCATCAGCTAATTGGCTTTTATCGGAAGAACTTGATTCCAGGGCTACTCATGTCTATTCTGTTGGTGGAAATGAATTGTCAGGTGATACTGGCTGA ATGTCTCTTTCCATGAAAGATGATGTTCAAGGAAGCCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTGCAAGATTTGGATGTTAAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGTCCAAATGAAATCCATGCAATACTATGTAACTACAAATATTTTGTCATCCATGTCAAGCCAGTGAACTTGCCCAAAAGTGGAACCATTGTACTATTTGATCGCAAGATGCTTAGGAATTTTCGCAAAGATGGACATAATTGGAAGAAAAAAAAGGATGGAAAGACAGTAAAAGAAGCTCATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTATGCCCATGGCCTTGATAACCCAACCTTTGTTCGTCGATGTTATTGGCTCCTTGATAAGTCTCTTGAACACGTTGTCCTTGTTCATTACCGCGAAACAAAAGAGAGTTCTCCATCCACGTCGATGAATTCAAATTCTGGTTCTGTCTCTAACCCATCAGCTAATTGGCTTTTATCGGAAGAACTTGATTCCAGGGCTACTCATGTCTATTCTGTTGGTGGAAATGAATTGTCAGGTGATACTGGCTGA ATGTCTCTTTCCATGAAAGATGATGTTCAAGGAAGCCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTGCAAGATTTGGATGTTAAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGTCCAAATGAAATCCATGCAATACTATGTAACTACAAATATTTTGTCATCCATGTCAAGCCAGTGAACTTGCCCAAAAGTGGAACCATTGTACTATTTGATCGCAAGATGCTTAGGAATTTTCGCAAAGATGGACATAATTGGAAGAAAAAAAAGGATGGAAAGACAGTAAAAGAAGCTCATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTATGCCCATGGCCTTGATAACCCAACCTTTGTTCGTCGATGTTATTGGCTCCTTGATAAGTCTCTTGAACACGTTGTCCTTGTTCATTACCGCGAAACAAAAGAGAGTTCTCCATCCACGTCGATGAATTCAAATTCTGGTTCTGTCTCTAACCCATCAGCTAATTGGCTTTTATCGGAAGAACTTGATTCCAGGGCTACTCATGTCTATTCTGTTGGTGGAAATGAATTGTCAGGTGATACTGGCTGA MSLSMKDDVQGSLVGSEIHGFHTLQDLDVKNIREEASARWLRPNEIHAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRRCYWLLDKSLEHVVLVHYRETKESSPSTSMNSNSGSVSNPSANWLLSEELDSRATHVYSVGGNELSGDTG Homology
BLAST of Csor.00g260030 vs. ExPASy Swiss-Prot
Match: O23463 (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana OX=3702 GN=CAMTA5 PE=2 SV=2) HSP 1 Score: 271.2 bits (692), Expect = 9.5e-72 Identity = 130/190 (68.42%), Postives = 155/190 (81.58%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy Swiss-Prot
Match: Q9LSP8 (Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana OX=3702 GN=CAMTA6 PE=1 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 8.6e-57 Identity = 114/179 (63.69%), Postives = 135/179 (75.42%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy Swiss-Prot
Match: Q7XHR2 (Calmodulin-binding transcription activator CBT OS=Oryza sativa subsp. japonica OX=39947 GN=CBT PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 108/198 (54.55%), Postives = 133/198 (67.17%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy Swiss-Prot
Match: Q8GSA7 (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana OX=3702 GN=CAMTA3 PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.1e-42 Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy Swiss-Prot
Match: Q6NPP4 (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana OX=3702 GN=CAMTA2 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.9e-41 Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = 0
BLAST of Csor.00g260030 vs. NCBI nr
Match: KAG6575100.1 (Calmodulin-binding transcription activator 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 403 bits (1036), Expect = 6.68e-142 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Csor.00g260030 vs. NCBI nr
Match: KAG7013672.1 (Calmodulin-binding transcription activator 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395 bits (1015), Expect = 1.04e-128 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Csor.00g260030 vs. NCBI nr
Match: XP_023547806.1 (calmodulin-binding transcription activator 5-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 390 bits (1002), Expect = 2.46e-127 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Csor.00g260030 vs. NCBI nr
Match: XP_023006401.1 (calmodulin-binding transcription activator 5-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 390 bits (1001), Expect = 3.55e-127 Identity = 191/194 (98.45%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Csor.00g260030 vs. NCBI nr
Match: XP_023547804.1 (calmodulin-binding transcription activator 5-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385 bits (989), Expect = 2.21e-125 Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy TrEMBL
Match: A0A6J1KXP0 (calmodulin-binding transcription activator 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499140 PE=3 SV=1) HSP 1 Score: 390 bits (1001), Expect = 1.72e-127 Identity = 191/194 (98.45%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy TrEMBL
Match: A0A6J1H596 (calmodulin-binding transcription activator 5-like OS=Cucurbita moschata OX=3662 GN=LOC111460176 PE=3 SV=1) HSP 1 Score: 385 bits (989), Expect = 1.07e-125 Identity = 191/196 (97.45%), Postives = 194/196 (98.98%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy TrEMBL
Match: A0A6J1L222 (calmodulin-binding transcription activator 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499140 PE=3 SV=1) HSP 1 Score: 385 bits (988), Expect = 1.54e-125 Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy TrEMBL
Match: A0A6J1CBA8 (calmodulin-binding transcription activator 5 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009931 PE=3 SV=1) HSP 1 Score: 367 bits (941), Expect = 1.55e-118 Identity = 181/194 (93.30%), Postives = 186/194 (95.88%), Query Frame = 0
BLAST of Csor.00g260030 vs. ExPASy TrEMBL
Match: A0A5D3BTF4 (Calmodulin-binding transcription activator 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00230 PE=3 SV=1) HSP 1 Score: 365 bits (938), Expect = 9.18e-118 Identity = 179/196 (91.33%), Postives = 187/196 (95.41%), Query Frame = 0
BLAST of Csor.00g260030 vs. TAIR 10
Match: AT4G16150.1 (calmodulin binding;transcription regulators ) HSP 1 Score: 271.2 bits (692), Expect = 6.7e-73 Identity = 130/190 (68.42%), Postives = 155/190 (81.58%), Query Frame = 0
BLAST of Csor.00g260030 vs. TAIR 10
Match: AT3G16940.1 (calmodulin binding;transcription regulators ) HSP 1 Score: 254.2 bits (648), Expect = 8.5e-68 Identity = 126/179 (70.39%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of Csor.00g260030 vs. TAIR 10
Match: AT2G22300.1 (signal responsive 1 ) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43 Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Csor.00g260030 vs. TAIR 10
Match: AT2G22300.2 (signal responsive 1 ) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43 Identity = 84/144 (58.33%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Csor.00g260030 vs. TAIR 10
Match: AT5G64220.1 (Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains ) HSP 1 Score: 169.5 bits (428), Expect = 2.8e-42 Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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