Csor.00g259210 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g259210
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr17: 1483240 .. 1485348 (+)
RNA-Seq Expression	Csor.00g259210
Synteny	Csor.00g259210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGTTTTTGCGATACCGAAATTGTTCCCTCGACGTATTACGATTCCTCTTTCATTTACTTCACTTTATCCCAAATGGGTTTCCACCTTCTCCACAATCGGACCTTCTTCACGGCCTCTCCACAATCTTACCTCATTCTTCAATGGCAGACCTTCAGGCAACTGCTTGGATTACGAGCTCTCCTTGGTCTCAGCCTTGAAGTCCTGTGCATCCAGTTCAGCTATTTTTCAAGGGCAGCAAATCCATGCCACCGTCCTCAAATCTGGGTTTGATTCCAATACTTACATCCTTAATAGCTTGATTAATATGTATGCCAAATGTGGACATATTGCCGATGCCAGATTGTTGTTTGATTCGTGTTCTGGCCTGGATTCTGTATCTTGTAACATCATGTTATCTGGGTATGTTAAACTTCGCCAATTGGAGAACGCACGCCACCTGTTCGATAAAATGCCTGAAAGAGGATGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGATTTTCAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATTGCAAGTGTCATGTCAGCATGTTCACATATTGGTGGGATTTGGAATTGCTTGATGCTCCATGCACTGGTAATAAAGCTACATTTCATTGGTCTTGTTCTTATTTCCACAAATTTGCTGCACATGTATTGTGTTTGTTCAAGTTCAAAAGATGCTAGGAGGTTATTCAATGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGCCTTGTTGATAAAGCAATAGAGTTGTTTGATAGGATTCCAGAAAAAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTCGTGCAAGTGAAACAATTAAGGGAAGCTTTGTTGATGTTTTCTGCAATGAGAAAAGGTGATCTTCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAATTTCAATTGATGAGGGCAGGCAGCTCCATTCAATCATAGTGAAAACTGGTTTTGATTGTTATGATTTCATGCAAGCAACTCTCATTAGTTTCTATTCAGCTTGTGGAAGGATTGAGCTTGCTAATTTGCAGTACCAGGTGAGTGATAAGAGTCATCTCGCAACTTCAAATGCCCTTATTGTGGGCTTCATGAAGAACAGAATGATTGATCAAGCAAGGCAAATATTTGATGTGATGCCTGCAAAAGATGTGTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTACCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTGGTCAGCGGTCTCGAGCCGAACGAGATCACCATGGTTAGTGTTTTCTCAGCCATTGCAGCTTCAGGTAAACTGGCAGAAGGAAGATGGGCGCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAGTCATTGACATGTATGCCAAATGTGGAAGTATCAGCACTGCCATGGATATGTTTTATCAGATCAGAGACAAGGCCTCCACAGTCTCACCGTGGAACGCCATCATATGTGGATTGGCGATGCACGGGCATGCGAATTTGTCTCTTGAAATCTTTTCCGACTTGCAAGGACGTAGTATCAAGCTCAACTCGATCACATTCCTCGGGGTCCTTGGTGCTTGTTGCCATGCTGGTTTGGTTGAGCTTGGGGAGAGATATTTCTGGAGCATGAAGAGTGTATATGGCGTAGAACCGAACATTAAGCATTATGGATGTCTAGTCGATCTGTTAGGCAGAGCTGCGCGATTAAGGGAAGCCGAGGAAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGGGCTGCAGAGAATTTAGCTAGATTGGAACCGTCCCACGGGGCAGGTCGAGTCCTCCTGTCGAACTTATACGCCGATGCAGGGTTATGGGAGGATGCATCTTTGGTGAGGAAAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTGCAGTGGTGTTGTATGA

mRNA sequence

ATGCTCGTTTTTGCGATACCGAAATTGTTCCCTCGACGTATTACGATTCCTCTTTCATTTACTTCACTTTATCCCAAATGGGTTTCCACCTTCTCCACAATCGGACCTTCTTCACGGCCTCTCCACAATCTTACCTCATTCTTCAATGGCAGACCTTCAGGCAACTGCTTGGATTACGAGCTCTCCTTGGTCTCAGCCTTGAAGTCCTGTGCATCCAGTTCAGCTATTTTTCAAGGGCAGCAAATCCATGCCACCGTCCTCAAATCTGGGTTTGATTCCAATACTTACATCCTTAATAGCTTGATTAATATGTATGCCAAATGTGGACATATTGCCGATGCCAGATTGTTGTTTGATTCGTGTTCTGGCCTGGATTCTGTATCTTGTAACATCATGTTATCTGGGTATGTTAAACTTCGCCAATTGGAGAACGCACGCCACCTGTTCGATAAAATGCCTGAAAGAGGATGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGATTTTCAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATTGCAAGTGTCATGTCAGCATGTTCACATATTGGTGGGATTTGGAATTGCTTGATGCTCCATGCACTGGTAATAAAGCTACATTTCATTGGTCTTGTTCTTATTTCCACAAATTTGCTGCACATGTATTGTGTTTGTTCAAGTTCAAAAGATGCTAGGAGGTTATTCAATGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGCCTTGTTGATAAAGCAATAGAGTTGTTTGATAGGATTCCAGAAAAAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTCGTGCAAGTGAAACAATTAAGGGAAGCTTTGTTGATGTTTTCTGCAATGAGAAAAGGTGATCTTCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAATTTCAATTGATGAGGGCAGGCAGCTCCATTCAATCATAGTGAAAACTGGTTTTGATTGTTATGATTTCATGCAAGCAACTCTCATTAGTTTCTATTCAGCTTGTGGAAGGATTGAGCTTGCTAATTTGCAGTACCAGGTGAGTGATAAGAGTCATCTCGCAACTTCAAATGCCCTTATTGTGGGCTTCATGAAGAACAGAATGATTGATCAAGCAAGGCAAATATTTGATGTGATGCCTGCAAAAGATGTGTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTACCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTGGTCAGCGGTCTCGAGCCGAACGAGATCACCATGGTTAGTGTTTTCTCAGCCATTGCAGCTTCAGGTAAACTGGCAGAAGGAAGATGGGCGCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAGTCATTGACATGTATGCCAAATGTGGAAGTATCAGCACTGCCATGGATATGTTTTATCAGATCAGAGACAAGGCCTCCACAGTCTCACCGTGGAACGCCATCATATGTGGATTGGCGATGCACGGGCATGCGAATTTGTCTCTTGAAATCTTTTCCGACTTGCAAGGACGTAGTATCAAGCTCAACTCGATCACATTCCTCGGGGTCCTTGGTGCTTGTTGCCATGCTGGTTTGGTTGAGCTTGGGGAGAGATATTTCTGGAGCATGAAGAGTGTATATGGCGTAGAACCGAACATTAAGCATTATGGATGTCTAGTCGATCTGTTAGGCAGAGCTGCGCGATTAAGGGAAGCCGAGGAAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGGGCTGCAGAGAATTTAGCTAGATTGGAACCGTCCCACGGGGCAGGTCGAGTCCTCCTGTCGAACTTATACGCCGATGCAGGGTTATGGGAGGATGCATCTTTGGTGAGGAAAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTGCAGTGGTGTTGTATGA

Coding sequence (CDS)

ATGCTCGTTTTTGCGATACCGAAATTGTTCCCTCGACGTATTACGATTCCTCTTTCATTTACTTCACTTTATCCCAAATGGGTTTCCACCTTCTCCACAATCGGACCTTCTTCACGGCCTCTCCACAATCTTACCTCATTCTTCAATGGCAGACCTTCAGGCAACTGCTTGGATTACGAGCTCTCCTTGGTCTCAGCCTTGAAGTCCTGTGCATCCAGTTCAGCTATTTTTCAAGGGCAGCAAATCCATGCCACCGTCCTCAAATCTGGGTTTGATTCCAATACTTACATCCTTAATAGCTTGATTAATATGTATGCCAAATGTGGACATATTGCCGATGCCAGATTGTTGTTTGATTCGTGTTCTGGCCTGGATTCTGTATCTTGTAACATCATGTTATCTGGGTATGTTAAACTTCGCCAATTGGAGAACGCACGCCACCTGTTCGATAAAATGCCTGAAAGAGGATGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGATTTTCAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATTGCAAGTGTCATGTCAGCATGTTCACATATTGGTGGGATTTGGAATTGCTTGATGCTCCATGCACTGGTAATAAAGCTACATTTCATTGGTCTTGTTCTTATTTCCACAAATTTGCTGCACATGTATTGTGTTTGTTCAAGTTCAAAAGATGCTAGGAGGTTATTCAATGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGCCTTGTTGATAAAGCAATAGAGTTGTTTGATAGGATTCCAGAAAAAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTCGTGCAAGTGAAACAATTAAGGGAAGCTTTGTTGATGTTTTCTGCAATGAGAAAAGGTGATCTTCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAATTTCAATTGATGAGGGCAGGCAGCTCCATTCAATCATAGTGAAAACTGGTTTTGATTGTTATGATTTCATGCAAGCAACTCTCATTAGTTTCTATTCAGCTTGTGGAAGGATTGAGCTTGCTAATTTGCAGTACCAGGTGAGTGATAAGAGTCATCTCGCAACTTCAAATGCCCTTATTGTGGGCTTCATGAAGAACAGAATGATTGATCAAGCAAGGCAAATATTTGATGTGATGCCTGCAAAAGATGTGTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTACCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTGGTCAGCGGTCTCGAGCCGAACGAGATCACCATGGTTAGTGTTTTCTCAGCCATTGCAGCTTCAGGTAAACTGGCAGAAGGAAGATGGGCGCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAGTCATTGACATGTATGCCAAATGTGGAAGTATCAGCACTGCCATGGATATGTTTTATCAGATCAGAGACAAGGCCTCCACAGTCTCACCGTGGAACGCCATCATATGTGGATTGGCGATGCACGGGCATGCGAATTTGTCTCTTGAAATCTTTTCCGACTTGCAAGGACGTAGTATCAAGCTCAACTCGATCACATTCCTCGGGGTCCTTGGTGCTTGTTGCCATGCTGGTTTGGTTGAGCTTGGGGAGAGATATTTCTGGAGCATGAAGAGTGTATATGGCGTAGAACCGAACATTAAGCATTATGGATGTCTAGTCGATCTGTTAGGCAGAGCTGCGCGATTAAGGGAAGCCGAGGAAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGGGCTGCAGAGAATTTAGCTAGATTGGAACCGTCCCACGGGGCAGGTCGAGTCCTCCTGTCGAACTTATACGCCGATGCAGGGTTATGGGAGGATGCATCTTTGGTGAGGAAAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTGCAGTGGTGTTGTATGA

Protein sequence

MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV

Homology

[Close]

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot
Match: P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 2.4e-226
Identity = 388/652 (59.51%), Postives = 502/652 (76.99%), Query Frame = 0


Query: 53  SGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIA 112
           SG   D E +LVSAL SCASS+ +  G+QIH  VLKSG DSN YI NS++NMYAKC  +A
Sbjct: 34  SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93

Query: 113 DARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDC 172
           DA  +F   + LDS S NIM+ GYV+ R+L +A  LFD MPER CVSYTT+I G AQN+ 
Sbjct: 94  DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153

Query: 173 WREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTN 232
           W EA+E+F++MR+ G+  NEVT+A+V+SACSH+GGIW+C ML +L IKL   G V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213

Query: 233 LLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISW 292
           LLHMYC+C   KDAR+LF+EMP RN V+WNVML GY K+GL+++A ELFD+I EKD++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273

Query: 293 ATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVK 352
            TMIDG ++  QL EAL+ ++ M +  + P+EVM+VDLLSA  +S+   +G QLH  IVK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333

Query: 353 TGFDCYDFMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQI 412
            GFDCYDF+QAT+I FY+    I+LA  Q++ S K H+A+ NALI GF+KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393

Query: 413 FDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSG-LEPNEITMVSVFSAIAASGK 472
           FD    KD+FSW+ MISGYAQ+  P +AL LF  M+ S  ++P+ ITMVSVFSAI++ G 
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453

Query: 473 LAEGRWAHEYVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRD-KASTVSPWNAI 532
           L EG+ AH+Y+    IP NDNL+AA+IDMYAKCGSI TA+++F+Q ++  +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513

Query: 533 ICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG 592
           ICG A HGHA L+L+++SDLQ   IK NSITF+GVL ACCHAGLVELG+ YF SMKS +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573

Query: 593 VEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 652
           +EP+IKHYGC+VDLLG+A RL EA+E I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633

Query: 653 ENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 703
             LA ++PSHG  +V+LSN+YADAG WED +LVR+ M+++ +  S   SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685

[Close]

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 9.6e-119
Identity = 233/637 (36.58%), Postives = 367/637 (57.61%), Query Frame = 0


Query: 68  KSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCSGLDSV 127
           KS   S+  F  Q +H  V+KSG   + Y++N+L+N+Y+K G+   AR LFD      + 
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 128 SCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAG 187
           S N +LS Y K   +++    FD++P+R  VS+TTMI+G      + +AI +  DM   G
Sbjct: 82  SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141

Query: 188 VAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDAR 247
           + P + T+ +V+++ +    +     +H+ ++KL   G V +S +LL+MY  C     A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 248 RLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLRE 307
            +F+ M VR+  SWN M+  +++ G +D A+  F+++ E+D+++W +MI GF Q      
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261

Query: 308 ALLMFSAM-RKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQATLI 367
           AL +FS M R   L P+   +  +LSAC     +  G+Q+HS IV TGFD    +   LI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 368 SFYSACGRIELAN--LQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVFSW 427
           S YS CG +E A   ++ + +    +    AL+ G++K   ++QA+ IF  +  +DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 428 STMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYVCN 487
           + MI GY Q+     A+ LF  MV  G  PN  T+ ++ S  ++   L+ G+  H     
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 488 KAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANLSL 547
                + ++S A+I MYAK G+I++A   F  IR +  TVS W ++I  LA HGHA  +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501

Query: 548 EIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDL 607
           E+F  +    ++ + IT++GV  AC HAGLV  G +YF  MK V  + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561

Query: 608 LGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGAGR 667
            GRA  L+EA+E I  MP++ DVV WG+LL+ACR H  +++G+ AAE L  LEP +    
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621

Query: 668 VLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGV 702
             L+NLY+  G WE+A+ +RK+M+  R+ +  G S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

[Close]

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-105
Identity = 232/671 (34.58%), Postives = 346/671 (51.56%), Query Frame = 0


Query: 33  TIGPSSRPLHNLTSFFNGRPSGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFD 92
           T+  SS P H L S  +  P  + +    SL S L +C +  ++   + IHA ++K G  
Sbjct: 9   TVPSSSYPFHFLPS--SSDPPYDSIRNHPSL-SLLHNCKTLQSL---RIIHAQMIKIGLH 68

Query: 93  SNTYILNSLINMYAKCGHIADARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKM 152
           +  Y L+ LI       H                               L  A  +F  +
Sbjct: 69  NTNYALSKLIEFCILSPH----------------------------FEGLPYAISVFKTI 128

Query: 153 PERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCL 212
            E   + + TM  G A +     A++++  M S G+ PN  T   V+ +C+         
Sbjct: 129 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 188

Query: 213 MLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSG 272
            +H  V+KL     + + T+L+ MY      +DA ++F++ P R+ VS+  ++KGY   G
Sbjct: 189 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 248

Query: 273 LVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLS 332
            ++ A +LFD IP KDV+SW  MI G+ +    +EAL +F  M K ++ P+E  +V ++S
Sbjct: 249 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 308

Query: 333 ACGQSISIDEGRQLHSIIVKTGFDCYDFMQATLISFYSACGRIELANLQYQVSDKSHLAT 392
           AC QS SI+ GRQ+H  I   GF     +   LI  YS CG +E                
Sbjct: 309 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE---------------- 368

Query: 393 SNALIVGFMKNRMIDQARQIFDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSGL 452
                           A  +F+ +P KDV SW+T+I GY    L   AL LF  M+ SG 
Sbjct: 369 ---------------TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 428

Query: 453 EPNEITMVSVFSAIAASGKLAEGRWAHEYVCN--KAIPLNDNLSAAVIDMYAKCGSISTA 512
            PN++TM+S+  A A  G +  GRW H Y+    K +    +L  ++IDMYAKCG I  A
Sbjct: 429 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 488

Query: 513 MDMFYQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACC 572
             +F  I  K  ++S WNA+I G AMHG A+ S ++FS ++   I+ + ITF+G+L AC 
Sbjct: 489 HQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 548

Query: 573 HAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIW 632
           H+G+++LG   F +M   Y + P ++HYGC++DLLG +   +EAEE I  M M+ D VIW
Sbjct: 549 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 608

Query: 633 GTLLAACRTHGEVEIGERAAENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQ 692
            +LL AC+ HG VE+GE  AENL ++EP +    VLLSN+YA AG W + +  R  +  +
Sbjct: 609 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 612

Query: 693 RMIRSPGCSGV 702
            M + PGCS +
Sbjct: 669 GMKKVPGCSSI 612

[Close]

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-104
Identity = 227/666 (34.08%), Postives = 348/666 (52.25%), Query Frame = 0


Query: 43  NLTSFFNGRPSGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLI 102
           +L+SF +  P    LD      S +KS    SAI+  + +HA+V+KSGF +  +I N LI
Sbjct: 12  DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71

Query: 103 NMYAKCGHIADARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTT 162
           + Y+KCG + D R +FD     +  + N +++G  KL  L+ A  LF  MPER   ++ +
Sbjct: 72  DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131

Query: 163 MILGLAQNDCWREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLH 222
           M+ G AQ+D   EA+  F  M   G   NE + ASV+SACS +  +   + +H+L+ K  
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191

Query: 223 FIGLVLISTNLLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFD 282
           F+  V I + L+ MY  C +  DA+R+F+EM  RN VSWN ++  + ++G    A+E  D
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG---PAVEALD 251

Query: 283 RIPEKDVISWATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDE 342
                                       +F  M +  + P+EV +  ++SAC    +I  
Sbjct: 252 ----------------------------VFQMMLESRVEPDEVTLASVISACASLSAIKV 311

Query: 343 GRQLHSIIVKTGFDCYD-FMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFM 402
           G+++H  +VK      D  +    +  Y+ C RI+ A   +      ++    ++I G+ 
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371

Query: 403 KNRMIDQARQIFDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVS 462
                  AR +F  M  ++V SW+ +I+GY QN   + AL LF  +    + P   +  +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431

Query: 463 VFSAIAASGKLAEGRWAHEYVCNKAIPLNDN------LSAAVIDMYAKCGSISTAMDMFY 522
           +  A A   +L  G  AH +V                +  ++IDMY KCG +     +F 
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491

Query: 523 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLV 582
           ++ ++      WNA+I G A +G+ N +LE+F ++     K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551

Query: 583 ELGERYFWSMKSVYGVEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLA 642
           E G  YF SM   +GV P   HY C+VDLLGRA  L EA+  I  MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611

Query: 643 ACRTHGEVEIGERAAENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRS 702
           AC+ H  + +G+  AE L  +EPS+    VLLSN+YA+ G WED   VRK+M+ + + + 
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635

[Close]

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.1e-101
Identity = 209/637 (32.81%), Postives = 336/637 (52.75%), Query Frame = 0


Query: 67  LKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCSGLDS 126
           L +CA S A   G QIH  ++K G+  + ++ NSL++ YA+CG                 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200

Query: 127 VSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEI-FKDMRS 186
                         +L++AR +FD+M ER  VS+T+MI G A+ D  ++A+++ F+ +R 
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260

Query: 187 AGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKD 246
             V PN VT+  V+SAC+ +  +     ++A +         L+ + L+ MY  C++   
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320

Query: 247 ARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQL 306
           A+RLF+E    N    N M   YV+ GL                                
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGLT------------------------------- 380

Query: 307 REALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQATL 366
           REAL +F+ M    + P+ + ++  +S+C Q  +I  G+  H  +++ GF+ +D +   L
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440

Query: 367 ISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVFSWS 426
           I  Y  C R + A   +       + T N+++ G+++N  +D A + F+ MP K++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500

Query: 427 TMISGYAQNELPDMALELFHGM-VVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYVCN 486
           T+ISG  Q  L + A+E+F  M    G+  + +TM+S+ SA    G L   +W + Y+  
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560

Query: 487 KAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANLSL 546
             I L+  L   ++DM+++CG   +AM +F  + ++   VS W A I  +AM G+A  ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620

Query: 547 EIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDL 606
           E+F D+  + +K + + F+G L AC H GLV+ G+  F+SM  ++GV P   HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680

Query: 607 LGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGAGR 666
           LGRA  L EA + I  MPM+ + VIW +LLAACR  G VE+   AAE +  L P      
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713

Query: 667 VLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGV 702
           VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713

[Close]

BLAST of Csor.00g259210 vs. NCBI nr
Match: KAG6575019.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1409 bits (3647), Expect = 0.0
Identity = 702/702 (100.00%), Postives = 702/702 (100.00%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE
Sbjct: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. NCBI nr
Match: KAG7013592.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1405 bits (3637), Expect = 0.0
Identity = 700/702 (99.72%), Postives = 701/702 (99.86%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE
Sbjct: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALK CASSSAIFQGQQIHATVLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDS
Sbjct: 61  LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. NCBI nr
Match: XP_022959003.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1387 bits (3590), Expect = 0.0
Identity = 691/700 (98.71%), Postives = 694/700 (99.14%), Query Frame = 0


Query: 3   VFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS 62
           VFAIPKLF RRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS
Sbjct: 3   VFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS 62

Query: 63  LVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCS 122
           LVSALK CASSSAIFQGQQIHATVLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDSCS
Sbjct: 63  LVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDSCS 122

Query: 123 GLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD 182
           GLDSVSCNIMLSGYVKLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD
Sbjct: 123 GLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD 182

Query: 183 MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS 242
           MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS
Sbjct: 183 MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS 242

Query: 243 SKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQV 302
            KDARRLFNEMP+RNTVSWNVMLKGYVKSGLVDKAIELFDRIPE+DVISWATMIDGFVQV
Sbjct: 243 LKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFVQV 302

Query: 303 KQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ 362
           KQLREAL MFSAMRK DLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ
Sbjct: 303 KQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ 362

Query: 363 ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF 422
           ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF
Sbjct: 363 ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF 422

Query: 423 SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV 482
           SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV
Sbjct: 423 SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV 482

Query: 483 CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL 542
           CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL
Sbjct: 483 CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL 542

Query: 543 SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV 602
           SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV
Sbjct: 543 SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV 602

Query: 603 DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA 662
           DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA
Sbjct: 603 DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA 662

Query: 663 GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV
Sbjct: 663 GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. NCBI nr
Match: XP_023548174.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1374 bits (3557), Expect = 0.0
Identity = 686/702 (97.72%), Postives = 690/702 (98.29%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           MLVFAIPKLFPRRITIPLSFT LYPKWVSTFS IGPSSRPLHNLTSFFNGRPSG CLDYE
Sbjct: 1   MLVFAIPKLFPRRITIPLSFTPLYPKWVSTFSPIGPSSRPLHNLTSFFNGRPSGKCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALKSCASSSAIFQGQQIHA VLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHAAVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CSGLDSVSCNIMLSGYVKLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIEIF
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SS KDARRLFNEMPVRNTVSWNVMLKGYVKS LVDKAIELFDRIPE+DVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSDLVDKAIELFDRIPERDVISWATMIDGFV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           +VKQLREALLMFSAMRK DLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF
Sbjct: 301 RVKQLREALLMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           MQATLISFYSACGRIELA LQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELAYLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAAVIDMYAKCGSI TAMD+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSIRTAMDVFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           NLSLEIFSDLQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. NCBI nr
Match: XP_023006214.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1373 bits (3555), Expect = 0.0
Identity = 684/702 (97.44%), Postives = 692/702 (98.58%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           MLVFAIPKLF RRITIPLSFT LYPKWVS+FSTIGPSSRPLHNLTSFFNGRPSGNCLDYE
Sbjct: 1   MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SS KDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           QVKQLREAL MFSAMRK DLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPD+ALELFHGMVV G+  NEITMVSVFSAIAASGKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAAVIDMYAKCGSISTAM++FYQIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           NLSLEIFSDLQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL
Match: A0A6J1H4P4 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460125 PE=4 SV=1)

HSP 1 Score: 1387 bits (3590), Expect = 0.0
Identity = 691/700 (98.71%), Postives = 694/700 (99.14%), Query Frame = 0


Query: 3   VFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS 62
           VFAIPKLF RRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS
Sbjct: 3   VFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYELS 62

Query: 63  LVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCS 122
           LVSALK CASSSAIFQGQQIHATVLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDSCS
Sbjct: 63  LVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDSCS 122

Query: 123 GLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD 182
           GLDSVSCNIMLSGYVKLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD
Sbjct: 123 GLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKD 182

Query: 183 MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS 242
           MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS
Sbjct: 183 MRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSS 242

Query: 243 SKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQV 302
            KDARRLFNEMP+RNTVSWNVMLKGYVKSGLVDKAIELFDRIPE+DVISWATMIDGFVQV
Sbjct: 243 LKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFVQV 302

Query: 303 KQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ 362
           KQLREAL MFSAMRK DLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ
Sbjct: 303 KQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQ 362

Query: 363 ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF 422
           ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF
Sbjct: 363 ATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVF 422

Query: 423 SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV 482
           SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV
Sbjct: 423 SWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYV 482

Query: 483 CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL 542
           CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL
Sbjct: 483 CNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANL 542

Query: 543 SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV 602
           SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV
Sbjct: 543 SLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLV 602

Query: 603 DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA 662
           DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA
Sbjct: 603 DLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGA 662

Query: 663 GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV
Sbjct: 663 GRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL
Match: A0A6J1L1I9 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499011 PE=4 SV=1)

HSP 1 Score: 1373 bits (3555), Expect = 0.0
Identity = 684/702 (97.44%), Postives = 692/702 (98.58%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           MLVFAIPKLF RRITIPLSFT LYPKWVS+FSTIGPSSRPLHNLTSFFNGRPSGNCLDYE
Sbjct: 1   MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNT+ILNSLINMYAKCGHIADARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SS KDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           QVKQLREAL MFSAMRK DLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPD+ALELFHGMVV G+  NEITMVSVFSAIAASGKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAAVIDMYAKCGSISTAM++FYQIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           NLSLEIFSDLQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702

[Close]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL
Match: A0A6J1C9E1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111009536 PE=4 SV=1)

HSP 1 Score: 1198 bits (3099), Expect = 0.0
Identity = 588/701 (83.88%), Postives = 640/701 (91.30%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
           ML+  IPKLFPR IT  LSF+ LY KWVST ST   +  PL NL S FNGRPSG CLDYE
Sbjct: 1   MLLSQIPKLFPRHITTALSFSPLYLKWVSTLSTTASTPGPLQNLPSCFNGRPSGTCLDYE 60

Query: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
           LSLVSALK CASS+AIFQGQQIH  VLK+GF+SNT+I NSLINMYAKCG ++D RLL DS
Sbjct: 61  LSLVSALKFCASSAAIFQGQQIHVIVLKTGFNSNTFIRNSLINMYAKCGRLSDGRLLCDS 120

Query: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
           CS LD VSCNIM+SGY+K RQL+NAR LFD MPERGCVSYTTMILGLAQN CW EAIEIF
Sbjct: 121 CSNLDPVSCNIMISGYIKFRQLDNARQLFDIMPERGCVSYTTMILGLAQNACWSEAIEIF 180

Query: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
           KDMRS+GVAPNEVT+ASVMSACSHIGGIWNC MLHALV+KL+F GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSSGVAPNEVTMASVMSACSHIGGIWNCRMLHALVMKLNFTGLVLISTNLLHMYCVC 240

Query: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
           SS ++ARRLF+EMP RNTVSWNVMLKGYVKSGLVD+A E F+RIPE+D+ISWAT+IDG+V
Sbjct: 241 SSLEEARRLFSEMPERNTVSWNVMLKGYVKSGLVDEAREFFERIPERDLISWATIIDGYV 300

Query: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
           QVKQLREA  M+S MRK DL PNEVMIVDLLSACGQS+S++EGRQ HS+IVKTGFDC+DF
Sbjct: 301 QVKQLREAFFMYSEMRKSDLEPNEVMIVDLLSACGQSMSVNEGRQFHSVIVKTGFDCFDF 360

Query: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
           +QAT+ISFY+ACGRI+LA LQYQVSDK+HL +SNALIVGF KN +I++ARQIFDVMP KD
Sbjct: 361 IQATVISFYAACGRIDLAYLQYQVSDKNHLTSSNALIVGFTKNGLIERARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFH MVVSG+EPNEITMVSVFS IAA GKLAEGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHEMVVSGVEPNEITMVSVFSTIAALGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
           Y+C+K I LNDNLSAA+IDMYAKCGSISTA+D+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YICSKGIYLNDNLSAAIIDMYAKCGSISTALDLFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
           N SL IFS+LQ RSI LNSITFLGVLGACCHAGLVELGE+YFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NSSLGIFSNLQRRSIMLNSITFLGVLGACCHAGLVELGEKYFWSMKSVYGIEPNIKHYGC 600

Query: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
           LVDLLGRA RLREAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAGRLREAEERIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660

Query: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGV 701
           GAGRVLLSNLYADAG+WEDASLVR+AMQ QRMIRSPGCS V
Sbjct: 661 GAGRVLLSNLYADAGMWEDASLVRRAMQGQRMIRSPGCSVV 701

[Close]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL
Match: A0A1S4E227 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)

HSP 1 Score: 1188 bits (3074), Expect = 0.0
Identity = 587/703 (83.50%), Postives = 640/703 (91.04%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTS-LYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDY 60
           M+V +IPK FPR I IPLSF   LY KWVSTFS I  S  PL NL++F NGRPS + LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFD 120
           ELS+VSALK CASSSAI  GQQIHA VLK GF+SNT+ILNSLINMY KCG ++ ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEI 180
           SCS LDSVSCNIM+SGY+KLRQLENAR LF KMPERGCVSYTTMILGLAQNDCW EAIE+
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVT+ASVMSACSHIGGIWNC MLHALVIKLHF GLVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGF 300
            SS KDA+RLFNEMPVRNTVSWNVMLKGYVKSGLVD+A ELF+RIPE+DV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300

Query: 301 VQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYD 360
           VQ+K+LREALL++SAMRK D HPNEV+IVDLLSACGQS+SIDEGRQ HS+IVK GF C+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360

Query: 361 FMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAK 420
           F+Q+T++SFY+ACGRI+LA LQYQ+SDKSHL +SN +IVGF KN MIDQARQIFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAH 480
           DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAA GKL EGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480

Query: 481 EYVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGH 540
           EYV NKAIPLNDNLSAA+IDMYAKCGSI TA+D+F+QI+DK STVSPWNAIICGLAMHG 
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540

Query: 541 ANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYG 600
           ANLSLEIFS+LQ R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMK+ +GVEPNIKHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
           CLVDLLGR  RLREAEE +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660

Query: 661 HGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           HG GRVLLSNLYADAGLWEDA+LVR+AM+S+RMIRSPG SGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703

[Close]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL
Match: A0A0A0KC16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1)

HSP 1 Score: 1184 bits (3063), Expect = 0.0
Identity = 587/703 (83.50%), Postives = 639/703 (90.90%), Query Frame = 0


Query: 1   MLVFAIPKLFPRRITIPLSFTS-LYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDY 60
           M+V +IPK FPR I IPLSF   LY KWVSTFSTI  S RPL NL+SF NGRPS + LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFD 120
           ELS+VSALK CASSSAI  GQQIHA VLK GF+SNT+ILNSLINMY KCG ++ ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEI 180
           SCS LDSVSCNIM+SGYVKLRQLENAR LF KMPERGCVSYTTMILGLAQNDCW EAIE+
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVT+ASVMSACSHIGGIWNC MLHALVIKLHF GLVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGF 300
            SS KD +RLFNEMPVRNTVSWNVMLKGYVKSGLVD+A ELF+RIPE+DV SWA MIDGF
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300

Query: 301 VQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYD 360
           VQ+K+LR+ALL++SAMRK DLHPNEV+IVDLLSACGQS+SI+EGRQ HS+IVK GF C+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360

Query: 361 FMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAK 420
           F+QAT+ISFY+AC RI+LA LQYQ+SDKSHL +SN +IVGF KN MIDQARQIFD+MP K
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAH 480
           DVFSWSTMISGYAQNELPD+AL+LFHGM+ S +EPNEITMVSVFSAIAA GKL EGRWAH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480

Query: 481 EYVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGH 540
           EYVCNK IPLNDNLSAA+IDMYAKCGSI TA+D+F QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540

Query: 541 ANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYG 600
           ANLSLEIFS+LQ RSIKLNSITFLGVL ACCHAGLVE+GERYFWSMK+ +GVEPNIKHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
           CLVDLLGR  RLREAEE +RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAENLARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660

Query: 661 HGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
           HG GRVLLSNLYADAGLWEDA+LVR+A+QSQRMIRSPG SGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703

[Close]

BLAST of Csor.00g259210 vs. TAIR 10
Match: AT5G19020.1 (mitochondrial editing factor 18 )

HSP 1 Score: 786.6 bits (2030), Expect = 1.7e-227
Identity = 388/652 (59.51%), Postives = 502/652 (76.99%), Query Frame = 0


Query: 53  SGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIA 112
           SG   D E +LVSAL SCASS+ +  G+QIH  VLKSG DSN YI NS++NMYAKC  +A
Sbjct: 34  SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93

Query: 113 DARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDC 172
           DA  +F   + LDS S NIM+ GYV+ R+L +A  LFD MPER CVSYTT+I G AQN+ 
Sbjct: 94  DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153

Query: 173 WREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTN 232
           W EA+E+F++MR+ G+  NEVT+A+V+SACSH+GGIW+C ML +L IKL   G V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213

Query: 233 LLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISW 292
           LLHMYC+C   KDAR+LF+EMP RN V+WNVML GY K+GL+++A ELFD+I EKD++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273

Query: 293 ATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVK 352
            TMIDG ++  QL EAL+ ++ M +  + P+EVM+VDLLSA  +S+   +G QLH  IVK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333

Query: 353 TGFDCYDFMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQI 412
            GFDCYDF+QAT+I FY+    I+LA  Q++ S K H+A+ NALI GF+KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393

Query: 413 FDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSG-LEPNEITMVSVFSAIAASGK 472
           FD    KD+FSW+ MISGYAQ+  P +AL LF  M+ S  ++P+ ITMVSVFSAI++ G 
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453

Query: 473 LAEGRWAHEYVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRD-KASTVSPWNAI 532
           L EG+ AH+Y+    IP NDNL+AA+IDMYAKCGSI TA+++F+Q ++  +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513

Query: 533 ICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG 592
           ICG A HGHA L+L+++SDLQ   IK NSITF+GVL ACCHAGLVELG+ YF SMKS +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573

Query: 593 VEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 652
           +EP+IKHYGC+VDLLG+A RL EA+E I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633

Query: 653 ENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 703
             LA ++PSHG  +V+LSN+YADAG WED +LVR+ M+++ +  S   SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685

[Close]

BLAST of Csor.00g259210 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 429.1 bits (1102), Expect = 6.9e-120
Identity = 233/637 (36.58%), Postives = 367/637 (57.61%), Query Frame = 0


Query: 68  KSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCSGLDSV 127
           KS   S+  F  Q +H  V+KSG   + Y++N+L+N+Y+K G+   AR LFD      + 
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 128 SCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAG 187
           S N +LS Y K   +++    FD++P+R  VS+TTMI+G      + +AI +  DM   G
Sbjct: 82  SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141

Query: 188 VAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDAR 247
           + P + T+ +V+++ +    +     +H+ ++KL   G V +S +LL+MY  C     A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 248 RLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQLRE 307
            +F+ M VR+  SWN M+  +++ G +D A+  F+++ E+D+++W +MI GF Q      
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261

Query: 308 ALLMFSAM-RKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQATLI 367
           AL +FS M R   L P+   +  +LSAC     +  G+Q+HS IV TGFD    +   LI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 368 SFYSACGRIELAN--LQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVFSW 427
           S YS CG +E A   ++ + +    +    AL+ G++K   ++QA+ IF  +  +DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 428 STMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYVCN 487
           + MI GY Q+     A+ LF  MV  G  PN  T+ ++ S  ++   L+ G+  H     
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 488 KAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANLSL 547
                + ++S A+I MYAK G+I++A   F  IR +  TVS W ++I  LA HGHA  +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501

Query: 548 EIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDL 607
           E+F  +    ++ + IT++GV  AC HAGLV  G +YF  MK V  + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561

Query: 608 LGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGAGR 667
            GRA  L+EA+E I  MP++ DVV WG+LL+ACR H  +++G+ AAE L  LEP +    
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621

Query: 668 VLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGV 702
             L+NLY+  G WE+A+ +RK+M+  R+ +  G S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

[Close]

BLAST of Csor.00g259210 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 385.6 bits (989), Expect = 8.7e-107
Identity = 232/671 (34.58%), Postives = 346/671 (51.56%), Query Frame = 0


Query: 33  TIGPSSRPLHNLTSFFNGRPSGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFD 92
           T+  SS P H L S  +  P  + +    SL S L +C +  ++   + IHA ++K G  
Sbjct: 9   TVPSSSYPFHFLPS--SSDPPYDSIRNHPSL-SLLHNCKTLQSL---RIIHAQMIKIGLH 68

Query: 93  SNTYILNSLINMYAKCGHIADARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKM 152
           +  Y L+ LI       H                               L  A  +F  +
Sbjct: 69  NTNYALSKLIEFCILSPH----------------------------FEGLPYAISVFKTI 128

Query: 153 PERGCVSYTTMILGLAQNDCWREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCL 212
            E   + + TM  G A +     A++++  M S G+ PN  T   V+ +C+         
Sbjct: 129 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 188

Query: 213 MLHALVIKLHFIGLVLISTNLLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSG 272
            +H  V+KL     + + T+L+ MY      +DA ++F++ P R+ VS+  ++KGY   G
Sbjct: 189 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 248

Query: 273 LVDKAIELFDRIPEKDVISWATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLS 332
            ++ A +LFD IP KDV+SW  MI G+ +    +EAL +F  M K ++ P+E  +V ++S
Sbjct: 249 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 308

Query: 333 ACGQSISIDEGRQLHSIIVKTGFDCYDFMQATLISFYSACGRIELANLQYQVSDKSHLAT 392
           AC QS SI+ GRQ+H  I   GF     +   LI  YS CG +E                
Sbjct: 309 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE---------------- 368

Query: 393 SNALIVGFMKNRMIDQARQIFDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSGL 452
                           A  +F+ +P KDV SW+T+I GY    L   AL LF  M+ SG 
Sbjct: 369 ---------------TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 428

Query: 453 EPNEITMVSVFSAIAASGKLAEGRWAHEYVCN--KAIPLNDNLSAAVIDMYAKCGSISTA 512
            PN++TM+S+  A A  G +  GRW H Y+    K +    +L  ++IDMYAKCG I  A
Sbjct: 429 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 488

Query: 513 MDMFYQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACC 572
             +F  I  K  ++S WNA+I G AMHG A+ S ++FS ++   I+ + ITF+G+L AC 
Sbjct: 489 HQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 548

Query: 573 HAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIW 632
           H+G+++LG   F +M   Y + P ++HYGC++DLLG +   +EAEE I  M M+ D VIW
Sbjct: 549 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 608

Query: 633 GTLLAACRTHGEVEIGERAAENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQ 692
            +LL AC+ HG VE+GE  AENL ++EP +    VLLSN+YA AG W + +  R  +  +
Sbjct: 609 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 612

Query: 693 RMIRSPGCSGV 702
            M + PGCS +
Sbjct: 669 GMKKVPGCSSI 612

[Close]

BLAST of Csor.00g259210 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 382.1 bits (980), Expect = 9.6e-106
Identity = 227/666 (34.08%), Postives = 348/666 (52.25%), Query Frame = 0


Query: 43  NLTSFFNGRPSGNCLDYELSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLI 102
           +L+SF +  P    LD      S +KS    SAI+  + +HA+V+KSGF +  +I N LI
Sbjct: 12  DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71

Query: 103 NMYAKCGHIADARLLFDSCSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTT 162
           + Y+KCG + D R +FD     +  + N +++G  KL  L+ A  LF  MPER   ++ +
Sbjct: 72  DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131

Query: 163 MILGLAQNDCWREAIEIFKDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLH 222
           M+ G AQ+D   EA+  F  M   G   NE + ASV+SACS +  +   + +H+L+ K  
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191

Query: 223 FIGLVLISTNLLHMYCVCSSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFD 282
           F+  V I + L+ MY  C +  DA+R+F+EM  RN VSWN ++  + ++G    A+E  D
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG---PAVEALD 251

Query: 283 RIPEKDVISWATMIDGFVQVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDE 342
                                       +F  M +  + P+EV +  ++SAC    +I  
Sbjct: 252 ----------------------------VFQMMLESRVEPDEVTLASVISACASLSAIKV 311

Query: 343 GRQLHSIIVKTGFDCYD-FMQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFM 402
           G+++H  +VK      D  +    +  Y+ C RI+ A   +      ++    ++I G+ 
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371

Query: 403 KNRMIDQARQIFDVMPAKDVFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVS 462
                  AR +F  M  ++V SW+ +I+GY QN   + AL LF  +    + P   +  +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431

Query: 463 VFSAIAASGKLAEGRWAHEYVCNKAIPLNDN------LSAAVIDMYAKCGSISTAMDMFY 522
           +  A A   +L  G  AH +V                +  ++IDMY KCG +     +F 
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491

Query: 523 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLV 582
           ++ ++      WNA+I G A +G+ N +LE+F ++     K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551

Query: 583 ELGERYFWSMKSVYGVEPNIKHYGCLVDLLGRAARLREAEETIRTMPMKADVVIWGTLLA 642
           E G  YF SM   +GV P   HY C+VDLLGRA  L EA+  I  MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611

Query: 643 ACRTHGEVEIGERAAENLARLEPSHGAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRS 702
           AC+ H  + +G+  AE L  +EPS+    VLLSN+YA+ G WED   VRK+M+ + + + 
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635

[Close]

BLAST of Csor.00g259210 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 369.4 bits (947), Expect = 6.4e-102
Identity = 209/637 (32.81%), Postives = 336/637 (52.75%), Query Frame = 0


Query: 67  LKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDSCSGLDS 126
           L +CA S A   G QIH  ++K G+  + ++ NSL++ YA+CG                 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200

Query: 127 VSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEI-FKDMRS 186
                         +L++AR +FD+M ER  VS+T+MI G A+ D  ++A+++ F+ +R 
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260

Query: 187 AGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVCSSSKD 246
             V PN VT+  V+SAC+ +  +     ++A +         L+ + L+ MY  C++   
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320

Query: 247 ARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFVQVKQL 306
           A+RLF+E    N    N M   YV+ GL                                
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGLT------------------------------- 380

Query: 307 REALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDFMQATL 366
           REAL +F+ M    + P+ + ++  +S+C Q  +I  G+  H  +++ GF+ +D +   L
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440

Query: 367 ISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKDVFSWS 426
           I  Y  C R + A   +       + T N+++ G+++N  +D A + F+ MP K++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500

Query: 427 TMISGYAQNELPDMALELFHGM-VVSGLEPNEITMVSVFSAIAASGKLAEGRWAHEYVCN 486
           T+ISG  Q  L + A+E+F  M    G+  + +TM+S+ SA    G L   +W + Y+  
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560

Query: 487 KAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHANLSL 546
             I L+  L   ++DM+++CG   +AM +F  + ++   VS W A I  +AM G+A  ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620

Query: 547 EIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGCLVDL 606
           E+F D+  + +K + + F+G L AC H GLV+ G+  F+SM  ++GV P   HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680

Query: 607 LGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSHGAGR 666
           LGRA  L EA + I  MPM+ + VIW +LLAACR  G VE+   AAE +  L P      
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713

Query: 667 VLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGV 702
           VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713

The following BLAST results are available for this feature:

BLAST of Csor.00g259210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q8	2.4e-226	59.51	Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop...	[more]
Q9SHZ8	9.6e-119	36.58	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	1.2e-105	34.58	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SIT7	1.4e-104	34.08	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9LUJ2	9.1e-101	32.81	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX...	[more]

BLAST of Csor.00g259210 vs. NCBI nr


Match Name	Identity	Description
KAG6575019.1	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7013592.1	99.72	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022959003.1	98.71	pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ...	[more]
XP_023548174.1	97.72	pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ...	[more]
XP_023006214.1	97.44	pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ...	[more]

BLAST of Csor.00g259210 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1H4P4	98.71	pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit...	[more]
A0A6J1L1I9	97.44	pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit...	[more]
A0A6J1C9E1	83.88	pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Momordic...	[more]
A0A1S4E227	83.50	pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 ...	[more]
A0A0A0KC16	83.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1	[more]

BLAST of Csor.00g259210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19020.1	1.7e-227	59.51	mitochondrial editing factor 18	[more]
AT2G22070.1	6.9e-120	36.58	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G08070.1	8.7e-107	34.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	9.6e-106	34.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22690.1	6.4e-102	32.81	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 288..386 e-value: 1.2E-12 score: 49.9 coord: 387..492 e-value: 6.3E-20 score: 73.8 coord: 226..287 e-value: 8.0E-12 score: 47.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..222 e-value: 7.0E-33 score: 116.3 coord: 493..700 e-value: 3.0E-34 score: 120.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 290..324 e-value: 1.2E-5 score: 23.2 coord: 422..456 e-value: 5.5E-8 score: 30.5 coord: 259..288 e-value: 1.0E-6 score: 26.5 coord: 127..158 e-value: 5.9E-8 score: 30.4 coord: 158..192 e-value: 1.4E-8 score: 32.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 231..256 e-value: 0.26 score: 11.6 coord: 259..288 e-value: 5.0E-8 score: 32.7 coord: 561..587 e-value: 0.71 score: 10.3 coord: 527..553 e-value: 0.49 score: 10.8 coord: 290..317 e-value: 0.0018 score: 18.4 coord: 98..119 e-value: 0.085 score: 13.1 coord: 127..157 e-value: 6.6E-7 score: 29.2 coord: 496..519 e-value: 0.46 score: 10.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 158..203 e-value: 2.7E-9 score: 37.1 coord: 419..465 e-value: 5.1E-10 score: 39.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 420..454 score: 12.221907
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..190 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 125..159 score: 11.91499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 257..291 score: 11.794416
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 268..380 coord: 130..284 coord: 388..700 coord: 61..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g259210.m01	Csor.00g259210.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding