Csor.00g257700 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAATTTGAAGATAATTATTTCTCGACATCCTTAACTACTTCAACCAAATCTCAAGCTTGCTTCTTCCTCTTCCTCCTTGTTCTTCTCCTCCTAGCCGTTCCTTATCGATTCTCGACTTCGCCGAGCTCCATGGCTTCAACGAGTAATCCGTCCCGTCCTCCTTCGTCTAAGGCCATGGCAGAACAAGCCTTCCCTAGACCACAGTTTGAAGCATCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACCTCCAACAAGTAA ATGGCAAAATTTGAAGATAATTATTTCTCGACATCCTTAACTACTTCAACCAAATCTCAAGCTTGCTTCTTCCTCTTCCTCCTTGTTCTTCTCCTCCTAGCCGTTCCTTATCGATTCTCGACTTCGCCGAGCTCCATGGCTTCAACGAGTAATCCGTCCCGTCCTCCTTCGTCTAAGGCCATGGCAGAACAAGCCTTCCCTAGACCACAGTTTGAAGCATCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACCTCCAACAAGTAA ATGGCAAAATTTGAAGATAATTATTTCTCGACATCCTTAACTACTTCAACCAAATCTCAAGCTTGCTTCTTCCTCTTCCTCCTTGTTCTTCTCCTCCTAGCCGTTCCTTATCGATTCTCGACTTCGCCGAGCTCCATGGCTTCAACGAGTAATCCGTCCCGTCCTCCTTCGTCTAAGGCCATGGCAGAACAAGCCTTCCCTAGACCACAGTTTGAAGCATCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACCTCCAACAAGTAA MAKFEDNYFSTSLTTSTKSQACFFLFLLVLLLLAVPYRFSTSPSSMASTSNPSRPPSSKAMAEQAFPRPQFEASMHEVPSGPNPTSNK Homology
BLAST of Csor.00g257700 vs. NCBI nr
Match: KAG6574868.1 (CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169 bits (428), Expect = 9.69e-53 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Csor.00g257700 vs. NCBI nr
Match: KAG6593788.1 (hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (249), Expect = 2.02e-25 Identity = 64/97 (65.98%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of Csor.00g257700 vs. NCBI nr
Match: KGN61461.1 (hypothetical protein Csa_006135 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 1.18e-15 Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g257700 vs. NCBI nr
Match: MBA0871173.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 48.1 bits (113), Expect = 2.22e-04 Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Csor.00g257700 vs. NCBI nr
Match: KAG8499015.1 (hypothetical protein CXB51_005436 [Gossypium anomalum]) HSP 1 Score: 47.0 bits (110), Expect = 2.32e-04 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of Csor.00g257700 vs. ExPASy TrEMBL
Match: A0A0A0LNB8 (CLAVATA3/ESR-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G131680 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.69e-16 Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g257700 vs. ExPASy TrEMBL
Match: A0A803LAH9 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.96e-06 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Csor.00g257700 vs. ExPASy TrEMBL
Match: A0A803MLN1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 7.98e-06 Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Csor.00g257700 vs. ExPASy TrEMBL
Match: A0A7J9MJ79 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_022006 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.07e-04 Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Csor.00g257700 vs. ExPASy TrEMBL
Match: A0A5D2R5A9 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A03G115400v1 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.12e-04 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|