Csor.00g254620 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g254620
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RNA recognition motif-containing protein isoform 2
Location	Csor_Chr06: 9059229 .. 9060985 (+)
RNA-Seq Expression	Csor.00g254620
Synteny	Csor.00g254620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATCGTAACTCGGTGGTCGCAAGACCAATCTGGATGAAGCAAGCTGAAGAGGCGAAACTGAAGAGCGAGGCTGAGAAAGATGCAGCGGCTAAAGCTGCTTTCGAAGCTACTTTTAGAGGCGTCGATAAGAATCCTGTAAAAGAAGCAGCATCCTCAGATAGTGATTTTGAGGATACTGAGGACTTGGAACACAAACCGATTGGGCCTGTTGACCCTGCTAGATGCACAGCAGCTGGAGCAGGTATAGCTGGTGGCACGGCCTGCGTGCCAGCTTCGTTTACTGTGGTAACTAAGGATGGCGATGGGAGGAAAGTTCCCCATGGTGGTGCGCAGATTAAAGTAAAGGCGTCGCCTGGTGTAGGCGTTGGTGGAACCGAGCAAGATGGCATTGTGAAGGATATGAATGATGGTACATATACGATCACTTATGTGGTGCCAAAAAGAGGGAATTATATGGTTAATATTGAGTGCAATGGAAGACCAATCATGGGTAGTCCATTCCCAGTGTTCTTTAGTGCAGGTATACTCGATGGTTATGTTATTTCTTGTAATCTTATTGTATACGTGCAATGATTTAATGTTTGATTTATCTATTAAGTAAATAGAATATATCCCAAGTCTGAATGCTTCTTTGGATTAGTTAGATATTTTGATGAAATGAAATGTCGACTTTATGCAGATATTAAGATTATCAATGGGAATGCACTATTTAGATACTGATACGGATACTTATTTAGATACTGATAACATTATTTCCTTGGCCATTGTTAATTGCTTGGCTTTTCCTCGCGTGTTATTGATTTATCTGTTTCATTCAGTTTGCTATGCGATGTTTTCTGATGACCGAGCTGTTTGTTGTTACCAACCAGGCTCGACTTCTGGTGGACTCCTGGGTTTAGCTCCTGCATCATCATTTCCAAATTTGGTCAATCAAAATATGCCCAACATGCCTAATTATTCAGGGTCTGTTTCGGGGGCATTTCCTGGTTTGATGGGAATGATTCCAGGTATTGTAGCTGGTGCTTCTGGTGGTGCTATCTTGCCTGGAATTGGAGCATCTCTTGGTGAAGTATGTCGAGAATACCTTAATGGTCAATGTGCGAAAACGGATTGTAAGTTAAATCATCCACCTCACAATTTGCTCATGACTGCAATAGCTGCAACAACCAGCATGGGAACTATCAGTCAAGTGCCCATGGCACCTTCTGCTGCTGCTATGGCAGCTGCTCAGGCCATTGTTGCTGCCCAAGCCCTTCAAGCCCATGCTGCTCAAGTGCAAGCACAACAAGCTCAGTCTGCGAAAGACTCTTCTGGTATGCTCAGATTTTTGTATATAATTCAATGCTCACTCTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTTGTGCTTCTCTCCTCAAATGCATCTTATGTTGTGTTCAAGTGTATTTGTTTGTGTTTTGGTTCTCTTTTGTACTTTCTTTTAACTTCCTAGATTACATATACCATATATTTTCTTAATGAACTTCTTGTTATTTGTTGATGCTTCTCTGGCAAGGTTCATCTGAAAAATCTGGGAAGGCTGCTGATGCACTGAAGAGAACGCTGCAAGTTAGCAATCTTAGCCCACTTCTCACCGTGGAACAGCTGAAACAACTTTTTAGTTTTTGTGGAACTGTTGTTGAATGTACCATTACTGATTCAAAGCATTTTGCTTACATAGAATACTCAAAGCCTGAAGAAGCTACTGCTGCGTTGGCATTGA

mRNA sequence

ATGGCTGATCGTAACTCGGTGGTCGCAAGACCAATCTGGATGAAGCAAGCTGAAGAGGCGAAACTGAAGAGCGAGGCTGAGAAAGATGCAGCGGCTAAAGCTGCTTTCGAAGCTACTTTTAGAGGCGTCGATAAGAATCCTGTAAAAGAAGCAGCATCCTCAGATAGTGATTTTGAGGATACTGAGGACTTGGAACACAAACCGATTGGGCCTGTTGACCCTGCTAGATGCACAGCAGCTGGAGCAGGTATAGCTGGTGGCACGGCCTGCGTGCCAGCTTCGTTTACTGTGGTAACTAAGGATGGCGATGGGAGGAAAGTTCCCCATGGTGGTGCGCAGATTAAAGTAAAGGCGTCGCCTGGTGTAGGCGTTGGTGGAACCGAGCAAGATGGCATTGTGAAGGATATGAATGATGGTACATATACGATCACTTATGTGGTGCCAAAAAGAGGGAATTATATGGTTAATATTGAGTGCAATGGAAGACCAATCATGGGTAGTCCATTCCCAGTGTTCTTTAGTGCAGGCTCGACTTCTGGTGGACTCCTGGGTTTAGCTCCTGCATCATCATTTCCAAATTTGGTCAATCAAAATATGCCCAACATGCCTAATTATTCAGGGTCTGTTTCGGGGGCATTTCCTGGTTTGATGGGAATGATTCCAGGTATTGTAGCTGGTGCTTCTGGTGGTGCTATCTTGCCTGGAATTGGAGCATCTCTTGGTGAAGTATGTCGAGAATACCTTAATGGTCAATGTGCGAAAACGGATTGTAAGTTAAATCATCCACCTCACAATTTGCTCATGACTGCAATAGCTGCAACAACCAGCATGGGAACTATCAGTCAAGTGCCCATGGCACCTTCTGCTGCTGCTATGGCAGCTGCTCAGGCCATTGTTGCTGCCCAAGCCCTTCAAGCCCATGCTGCTCAAGTGCAAGCACAACAAGCTCAGTCTGCGAAAGACTCTTCTGGTTCATCTGAAAAATCTGGGAAGGCTGCTGATGCACTGAAGAGAACGCTGCAAAATACTCAAAGCCTGAAGAAGCTACTGCTGCGTTGGCATTGA

Coding sequence (CDS)

ATGGCTGATCGTAACTCGGTGGTCGCAAGACCAATCTGGATGAAGCAAGCTGAAGAGGCGAAACTGAAGAGCGAGGCTGAGAAAGATGCAGCGGCTAAAGCTGCTTTCGAAGCTACTTTTAGAGGCGTCGATAAGAATCCTGTAAAAGAAGCAGCATCCTCAGATAGTGATTTTGAGGATACTGAGGACTTGGAACACAAACCGATTGGGCCTGTTGACCCTGCTAGATGCACAGCAGCTGGAGCAGGTATAGCTGGTGGCACGGCCTGCGTGCCAGCTTCGTTTACTGTGGTAACTAAGGATGGCGATGGGAGGAAAGTTCCCCATGGTGGTGCGCAGATTAAAGTAAAGGCGTCGCCTGGTGTAGGCGTTGGTGGAACCGAGCAAGATGGCATTGTGAAGGATATGAATGATGGTACATATACGATCACTTATGTGGTGCCAAAAAGAGGGAATTATATGGTTAATATTGAGTGCAATGGAAGACCAATCATGGGTAGTCCATTCCCAGTGTTCTTTAGTGCAGGCTCGACTTCTGGTGGACTCCTGGGTTTAGCTCCTGCATCATCATTTCCAAATTTGGTCAATCAAAATATGCCCAACATGCCTAATTATTCAGGGTCTGTTTCGGGGGCATTTCCTGGTTTGATGGGAATGATTCCAGGTATTGTAGCTGGTGCTTCTGGTGGTGCTATCTTGCCTGGAATTGGAGCATCTCTTGGTGAAGTATGTCGAGAATACCTTAATGGTCAATGTGCGAAAACGGATTGTAAGTTAAATCATCCACCTCACAATTTGCTCATGACTGCAATAGCTGCAACAACCAGCATGGGAACTATCAGTCAAGTGCCCATGGCACCTTCTGCTGCTGCTATGGCAGCTGCTCAGGCCATTGTTGCTGCCCAAGCCCTTCAAGCCCATGCTGCTCAAGTGCAAGCACAACAAGCTCAGTCTGCGAAAGACTCTTCTGGTTCATCTGAAAAATCTGGGAAGGCTGCTGATGCACTGAAGAGAACGCTGCAAAATACTCAAAGCCTGAAGAAGCTACTGCTGCGTTGGCATTGA

Protein sequence

MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFEDTEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASPGVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSGGLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASLGEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQNTQSLKKLLLRWH

Homology

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BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot
Match: O75382 (Tripartite motif-containing protein 3 OS=Homo sapiens OX=9606 GN=TRIM3 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.7e-07
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 79  AAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASPGVGVGGTEQDGIVKDMND 138
           A G G+       PAS TV TKD DGR V  G A+++ + +   G  GT     V D  +
Sbjct: 327 ATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEIT---GPDGTRLPVPVVDHKN 386

Query: 139 GTYTITYVVPKRGNYMVNIECNGRPIMGSPFPV 172
           GTY + Y     G  ++++   G+P+ GSPF V
Sbjct: 387 GTYELVYTARTEGELLLSVLLYGQPVRGSPFRV 416

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BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot
Match: E7FAM5 (E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.6e-07
Identity = 42/112 (37.50%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 79  AAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIK-VKASPGVGVGGTEQDGIVKDMN 138
           A G GI       PASFTVV  D DG     GG  +  V  SP   +   E    V D  
Sbjct: 445 AHGEGIKRALQGKPASFTVVGYDHDGEPRLSGGDSVSVVLMSPDGNLSSAE----VSDHQ 504

Query: 139 DGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSGGLLGLAPAS 190
           DGTYT++Y+    G +++++    + I GSPF V   +G + GG +GL  AS
Sbjct: 505 DGTYTVSYLPKGEGEHLLSVLICNQHIEGSPFKVMVKSGRSYGG-VGLPMAS 551

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BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot
Match: Q9R1R2 (Tripartite motif-containing protein 3 OS=Mus musculus OX=10090 GN=Trim3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.5e-06
Identity = 33/93 (35.48%), Postives = 47/93 (50.54%), Query Frame = 0


Query: 79  AAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASPGVGVGGTEQDGIVKDMND 138
           A G G+       PAS TV TKD DGR V  G A++  + +   G  G      V D  +
Sbjct: 327 ATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELCAEIT---GPDGVRLAVPVVDHKN 386

Query: 139 GTYTITYVVPKRGNYMVNIECNGRPIMGSPFPV 172
           GTY + Y     G+ ++++   G+P+ GSPF V
Sbjct: 387 GTYELVYTARTEGDLLLSVLLYGQPVRGSPFRV 416

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BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot
Match: O70277 (Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.3e-06
Identity = 33/93 (35.48%), Postives = 47/93 (50.54%), Query Frame = 0


Query: 79  AAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASPGVGVGGTEQDGIVKDMND 138
           A G G+       PAS TV TKD DGR V  G A++  + +   G  G      V D  +
Sbjct: 327 ATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELCAEIT---GPDGMRLAVPVVDHKN 386

Query: 139 GTYTITYVVPKRGNYMVNIECNGRPIMGSPFPV 172
           GTY + Y     G+ ++++   G+P+ GSPF V
Sbjct: 387 GTYELVYTARTEGDLLLSVLLYGQPVRGSPFRV 416

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BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot
Match: D3ZHA0 (Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 30/101 (29.70%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 69   IGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASPGVGVGGTE 128
            +  ++    +A G G++ G    PA+FT+VTKD        GG  + V+       G ++
Sbjct: 1855 VDAINSGHVSAYGPGLSHGMVNKPATFTIVTKDAG-----EGGLSLAVE-------GPSK 1914

Query: 129  QDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPF 170
             +   KD  DGT T++Y+    G+Y + +  + + I GSPF
Sbjct: 1915 AEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPF 1943

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BLAST of Csor.00g254620 vs. NCBI nr
Match: KAG6597274.1 (E3 ubiquitin-protein ligase TRIM71, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664 bits (1713), Expect = 7.16e-240
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED
Sbjct: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQNTQSLKKLLLRWH 354
           AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQNTQSLKKLLLRWH
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQNTQSLKKLLLRWH 354

[Close]

BLAST of Csor.00g254620 vs. NCBI nr
Match: KAG7028745.1 (hypothetical protein SDJN02_09926 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637 bits (1642), Expect = 1.83e-220
Identity = 340/341 (99.71%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED
Sbjct: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQC KTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCVKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. NCBI nr
Match: XP_022934072.1 (uncharacterized protein LOC111441348 [Cucurbita moschata])

HSP 1 Score: 635 bits (1639), Expect = 4.60e-220
Identity = 339/341 (99.41%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED
Sbjct: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGS+SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSSSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. NCBI nr
Match: XP_023538690.1 (uncharacterized protein LOC111799560 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634 bits (1634), Expect = 2.96e-219
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED
Sbjct: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
            EDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  AEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGS+SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSSSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. NCBI nr
Match: XP_022974771.1 (uncharacterized protein LOC111473497 [Cucurbita maxima])

HSP 1 Score: 632 bits (1630), Expect = 1.19e-218
Identity = 337/341 (98.83%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQA EAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDF+D
Sbjct: 1   MADRNSVVARPIWMKQAAEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFDD 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGS+SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSSSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL
Match: A0A6J1F1M6 (uncharacterized protein LOC111441348 OS=Cucurbita moschata OX=3662 GN=LOC111441348 PE=4 SV=1)

HSP 1 Score: 635 bits (1639), Expect = 2.23e-220
Identity = 339/341 (99.41%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED
Sbjct: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGS+SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSSSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL
Match: A0A6J1ICA6 (uncharacterized protein LOC111473497 OS=Cucurbita maxima OX=3661 GN=LOC111473497 PE=4 SV=1)

HSP 1 Score: 632 bits (1630), Expect = 5.76e-219
Identity = 337/341 (98.83%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVARPIWMKQA EAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDF+D
Sbjct: 1   MADRNSVVARPIWMKQAAEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFDD 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP
Sbjct: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGS+SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSSSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL
Match: A0A6J1CZY2 (uncharacterized protein LOC111016096 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016096 PE=4 SV=1)

HSP 1 Score: 615 bits (1586), Expect = 4.21e-212
Identity = 332/357 (93.00%), Postives = 342/357 (95.80%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVA+PIWMKQAEEAKLKSEAEKDAAAKAAFEATF+GVDK P KEAASSDSDFED
Sbjct: 1   MADRNSVVAKPIWMKQAEEAKLKSEAEKDAAAKAAFEATFKGVDKIPAKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLE+KPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKD DGRKVP GGAQIKVK SP
Sbjct: 61  TEDLENKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDADGRKVPRGGAQIKVKVSP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAG++SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGASSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAP+SSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPSSSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATT+MGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTTMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ--------NTQSLKKL 349
           AQALQAHAAQVQAQQAQSAK+SSGSSEKSGKAADALKRTLQ        N + LK+L
Sbjct: 301 AQALQAHAAQVQAQQAQSAKESSGSSEKSGKAADALKRTLQVSNLSPILNVEQLKQL 357

[Close]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL
Match: A0A6J1D095 (uncharacterized protein LOC111016096 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016096 PE=4 SV=1)

HSP 1 Score: 615 bits (1586), Expect = 8.13e-212
Identity = 332/357 (93.00%), Postives = 342/357 (95.80%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRNSVVA+PIWMKQAEEAKLKSEAEKDAAAKAAFEATF+GVDK P KEAASSDSDFED
Sbjct: 1   MADRNSVVAKPIWMKQAEEAKLKSEAEKDAAAKAAFEATFKGVDKIPAKEAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
           TEDLE+KPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKD DGRKVP GGAQIKVK SP
Sbjct: 61  TEDLENKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDADGRKVPRGGAQIKVKVSP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAG++SG
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGASSG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAP+SSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPSSSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATT+MGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTTMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ--------NTQSLKKL 349
           AQALQAHAAQVQAQQAQSAK+SSGSSEKSGKAADALKRTLQ        N + LK+L
Sbjct: 301 AQALQAHAAQVQAQQAQSAKESSGSSEKSGKAADALKRTLQVSNLSPILNVEQLKQL 357

[Close]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL
Match: A0A6J1IQS5 (uncharacterized protein LOC111479658 OS=Cucurbita maxima OX=3661 GN=LOC111479658 PE=4 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 1.18e-211
Identity = 327/341 (95.89%), Postives = 334/341 (97.95%), Query Frame = 0


Query: 1   MADRNSVVARPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKNPVKEAASSDSDFED 60
           MADRN VVA+PIWMKQAEEAKLKSEAEKDAAAKAAFEATF+GVDKNP +EAASSDSDFED
Sbjct: 1   MADRNLVVAKPIWMKQAEEAKLKSEAEKDAAAKAAFEATFKGVDKNPAREAASSDSDFED 60

Query: 61  TEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGRKVPHGGAQIKVKASP 120
            EDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKD DGRKVPHGGAQIKVK  P
Sbjct: 61  AEDLEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDVDGRKVPHGGAQIKVKVLP 120

Query: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIMGSPFPVFFSAGSTSG 180
           GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGR IMGSPFPVFFSAG+++G
Sbjct: 121 GVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRSIMGSPFPVFFSAGTSAG 180

Query: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240
           GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL
Sbjct: 181 GLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVAGASGGAILPGIGASL 240

Query: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300
           GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA
Sbjct: 241 GEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPMAPSAAAMAAAQAIVA 300

Query: 301 AQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 341
           AQALQAHAAQVQAQQAQSAKDSSGSS+KSGKAADALKRTLQ
Sbjct: 301 AQALQAHAAQVQAQQAQSAKDSSGSSDKSGKAADALKRTLQ 341

[Close]

BLAST of Csor.00g254620 vs. TAIR 10
Match: AT3G23900.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 255/356 (71.63%), Postives = 294/356 (82.58%), Query Frame = 0


Query: 2   ADRNSVVA--RPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKN--------PVKEA 61
           +DR S  +  +PIWMK AE+AK+K E EKDAAAKAAFEATF+GVD+         PV E+
Sbjct: 3   SDRGSAASGGKPIWMKHAEDAKIKDEGEKDAAAKAAFEATFKGVDQTTHLIEPVAPVPES 62

Query: 62  A-SSDSDFEDTED-----LEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGR 121
           A  SDSD +D +D     L  KPIGPVDP++ TA+GAGI GGTACVP++F VVTKD DGR
Sbjct: 63  APESDSDSDDDDDDESDYLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGR 122

Query: 122 KVPHGGAQIKVKASPGVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIM 181
           KVP+GGA I+VK SPGVGVGGT+Q+G+VKD+ DG+Y +TYVVPKRGNYMVNIECNG  IM
Sbjct: 123 KVPNGGALIRVKVSPGVGVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIM 182

Query: 182 GSPFPVFFSAGSTSGGLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVA 241
           GSPFPVFFS GS+S GL+G APA S+ NL+NQ MPNMPNY+GSVSGAFPGL+GM+PGI +
Sbjct: 183 GSPFPVFFSQGSSSTGLMGSAPA-SYSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIAS 242

Query: 242 GASGGAILPGIGASLGEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPM 301
           G SGGAILPG+GASLGEVCREYLNG+C  + CKLNHPP NLLMTAIAATTSMG +SQVPM
Sbjct: 243 GPSGGAILPGVGASLGEVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPM 302

Query: 302 APSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 342
           APSAAAMAAAQAIVAAQALQAHA+Q+QA QAQS K S GS EK G+  D LK+ LQ
Sbjct: 303 APSAAAMAAAQAIVAAQALQAHASQMQA-QAQSNKGSLGSPEK-GENGD-LKKFLQ 354

[Close]

BLAST of Csor.00g254620 vs. TAIR 10
Match: AT3G23900.2 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 255/356 (71.63%), Postives = 294/356 (82.58%), Query Frame = 0


Query: 2   ADRNSVVA--RPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKN--------PVKEA 61
           +DR S  +  +PIWMK AE+AK+K E EKDAAAKAAFEATF+GVD+         PV E+
Sbjct: 3   SDRGSAASGGKPIWMKHAEDAKIKDEGEKDAAAKAAFEATFKGVDQTTHLIEPVAPVPES 62

Query: 62  A-SSDSDFEDTED-----LEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGR 121
           A  SDSD +D +D     L  KPIGPVDP++ TA+GAGI GGTACVP++F VVTKD DGR
Sbjct: 63  APESDSDSDDDDDDESDYLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGR 122

Query: 122 KVPHGGAQIKVKASPGVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIM 181
           KVP+GGA I+VK SPGVGVGGT+Q+G+VKD+ DG+Y +TYVVPKRGNYMVNIECNG  IM
Sbjct: 123 KVPNGGALIRVKVSPGVGVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIM 182

Query: 182 GSPFPVFFSAGSTSGGLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVA 241
           GSPFPVFFS GS+S GL+G APA S+ NL+NQ MPNMPNY+GSVSGAFPGL+GM+PGI +
Sbjct: 183 GSPFPVFFSQGSSSTGLMGSAPA-SYSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIAS 242

Query: 242 GASGGAILPGIGASLGEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPM 301
           G SGGAILPG+GASLGEVCREYLNG+C  + CKLNHPP NLLMTAIAATTSMG +SQVPM
Sbjct: 243 GPSGGAILPGVGASLGEVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPM 302

Query: 302 APSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 342
           APSAAAMAAAQAIVAAQALQAHA+Q+QA QAQS K S GS EK G+  D LK+ LQ
Sbjct: 303 APSAAAMAAAQAIVAAQALQAHASQMQA-QAQSNKGSLGSPEK-GENGD-LKKFLQ 354

[Close]

BLAST of Csor.00g254620 vs. TAIR 10
Match: AT3G23900.3 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 255/356 (71.63%), Postives = 294/356 (82.58%), Query Frame = 0


Query: 2   ADRNSVVA--RPIWMKQAEEAKLKSEAEKDAAAKAAFEATFRGVDKN--------PVKEA 61
           +DR S  +  +PIWMK AE+AK+K E EKDAAAKAAFEATF+GVD+         PV E+
Sbjct: 3   SDRGSAASGGKPIWMKHAEDAKIKDEGEKDAAAKAAFEATFKGVDQTTHLIEPVAPVPES 62

Query: 62  A-SSDSDFEDTED-----LEHKPIGPVDPARCTAAGAGIAGGTACVPASFTVVTKDGDGR 121
           A  SDSD +D +D     L  KPIGPVDP++ TA+GAGI GGTACVP++F VVTKD DGR
Sbjct: 63  APESDSDSDDDDDDESDYLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGR 122

Query: 122 KVPHGGAQIKVKASPGVGVGGTEQDGIVKDMNDGTYTITYVVPKRGNYMVNIECNGRPIM 181
           KVP+GGA I+VK SPGVGVGGT+Q+G+VKD+ DG+Y +TYVVPKRGNYMVNIECNG  IM
Sbjct: 123 KVPNGGALIRVKVSPGVGVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIM 182

Query: 182 GSPFPVFFSAGSTSGGLLGLAPASSFPNLVNQNMPNMPNYSGSVSGAFPGLMGMIPGIVA 241
           GSPFPVFFS GS+S GL+G APA S+ NL+NQ MPNMPNY+GSVSGAFPGL+GM+PGI +
Sbjct: 183 GSPFPVFFSQGSSSTGLMGSAPA-SYSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIAS 242

Query: 242 GASGGAILPGIGASLGEVCREYLNGQCAKTDCKLNHPPHNLLMTAIAATTSMGTISQVPM 301
           G SGGAILPG+GASLGEVCREYLNG+C  + CKLNHPP NLLMTAIAATTSMG +SQVPM
Sbjct: 243 GPSGGAILPGVGASLGEVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPM 302

Query: 302 APSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSEKSGKAADALKRTLQ 342
           APSAAAMAAAQAIVAAQALQAHA+Q+QA QAQS K S GS EK G+  D LK+ LQ
Sbjct: 303 APSAAAMAAAQAIVAAQALQAHASQMQA-QAQSNKGSLGSPEK-GENGD-LKKFLQ 354

The following BLAST results are available for this feature:

BLAST of Csor.00g254620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O75382	1.7e-07	36.56	Tripartite motif-containing protein 3 OS=Homo sapiens OX=9606 GN=TRIM3 PE=1 SV=2	[more]
E7FAM5	8.6e-07	37.50	E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1	[more]
Q9R1R2	2.5e-06	35.48	Tripartite motif-containing protein 3 OS=Mus musculus OX=10090 GN=Trim3 PE=1 SV=...	[more]
O70277	3.3e-06	35.48	Tripartite motif-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Trim3 PE=...	[more]
D3ZHA0	1.4e-04	29.70	Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1	[more]

BLAST of Csor.00g254620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597274.1	7.16e-240	100.00	E3 ubiquitin-protein ligase TRIM71, partial [Cucurbita argyrosperma subsp. soror...	[more]
KAG7028745.1	1.83e-220	99.71	hypothetical protein SDJN02_09926 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022934072.1	4.60e-220	99.41	uncharacterized protein LOC111441348 [Cucurbita moschata]	[more]
XP_023538690.1	2.96e-219	99.12	uncharacterized protein LOC111799560 [Cucurbita pepo subsp. pepo]	[more]
XP_022974771.1	1.19e-218	98.83	uncharacterized protein LOC111473497 [Cucurbita maxima]	[more]

BLAST of Csor.00g254620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1M6	2.23e-220	99.41	uncharacterized protein LOC111441348 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A6J1ICA6	5.76e-219	98.83	uncharacterized protein LOC111473497 OS=Cucurbita maxima OX=3661 GN=LOC111473497...	[more]
A0A6J1CZY2	4.21e-212	93.00	uncharacterized protein LOC111016096 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D095	8.13e-212	93.00	uncharacterized protein LOC111016096 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IQS5	1.18e-211	95.89	uncharacterized protein LOC111479658 OS=Cucurbita maxima OX=3661 GN=LOC111479658...	[more]

BLAST of Csor.00g254620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23900.1	4.5e-128	71.63	RNA recognition motif (RRM)-containing protein	[more]
AT3G23900.2	4.5e-128	71.63	RNA recognition motif (RRM)-containing protein	[more]
AT3G23900.3	4.5e-128	71.63	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..329
None	No IPR available	PANTHER	PTHR32343:SF8	SPLICING REGULATORY GLUTAMINE/LYSINE-RICH PROTEIN 1	coord: 1..341
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..341
IPR001298	Filamin/ABP280 repeat	SMART	SM00557	flmn_3	coord: 73..176 e-value: 4.1E-27 score: 106.1
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 71..178 e-value: 1.5E-25 score: 91.7
IPR017868	Filamin/ABP280 repeat-like	PFAM	PF00630	Filamin	coord: 71..169 e-value: 8.3E-20 score: 71.5
IPR017868	Filamin/ABP280 repeat-like	PROSITE	PS50194	FILAMIN_REPEAT	coord: 69..173 score: 20.7052
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 243..264 score: 9.018795
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 71..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g254620.m01	Csor.00g254620.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:1901652	response to peptide
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding