
Csor.00g253870 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGATACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGATACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA ATGAGTTTCCATTGCCACAGCCGTGGGCTGTTATCAGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGTCGGCTCTTAAAGCCGGTGAGCAGCCAATTACGTCGAACCGGCTTCTGGCCGGATACATGGCTTATGAGTTTCTGACCAAAGGAACCATCTTGGGCAGGAAGTTCGACCCGGATCGAGCCGAAGCAAGCCCATTCCCGAACGCCGTTGCTCAGTACAAGAAGCCGAAGACGGAAGCCGCGCCGCCGGAGATCATAAAAAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCAACCATTTTGAAGACGGATAAGGCCCAGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTACCAAATAA MSFHCHSRGLLSAGPSRKRKEPSALKAGEQPITSNRLLAGYMAYEFLTKGTILGRKFDPDRAEASPFPNAVAQYKKPKTEAAPPEIIKKEHQIQSYADVATILKTDKAQISGIVNPTQLARWLTK Homology
BLAST of Csor.00g253870 vs. NCBI nr
Match: KAG6597349.1 (hypothetical protein SDJN03_10529, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028813.1 hypothetical protein SDJN02_09994, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250 bits (639), Expect = 9.41e-84 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of Csor.00g253870 vs. NCBI nr
Match: XP_023539410.1 (uncharacterized protein LOC111800062 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238 bits (608), Expect = 5.21e-79 Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of Csor.00g253870 vs. NCBI nr
Match: XP_022924296.1 (uncharacterized protein LOC111431827 [Cucurbita moschata] >KAG6582401.1 hypothetical protein SDJN03_22403, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018804.1 hypothetical protein SDJN02_20677, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 187 bits (476), Expect = 6.31e-59 Identity = 96/125 (76.80%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Csor.00g253870 vs. NCBI nr
Match: XP_023526927.1 (uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184 bits (468), Expect = 1.05e-57 Identity = 95/125 (76.00%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Csor.00g253870 vs. NCBI nr
Match: KGN56835.1 (hypothetical protein Csa_009887 [Cucumis sativus]) HSP 1 Score: 184 bits (467), Expect = 1.86e-57 Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0
BLAST of Csor.00g253870 vs. ExPASy TrEMBL
Match: A0A6J1E960 (uncharacterized protein LOC111431827 OS=Cucurbita moschata OX=3662 GN=LOC111431827 PE=4 SV=1) HSP 1 Score: 187 bits (476), Expect = 3.06e-59 Identity = 96/125 (76.80%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Csor.00g253870 vs. ExPASy TrEMBL
Match: A0A0A0L4C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1) HSP 1 Score: 184 bits (467), Expect = 9.00e-58 Identity = 97/130 (74.62%), Postives = 108/130 (83.08%), Query Frame = 0
BLAST of Csor.00g253870 vs. ExPASy TrEMBL
Match: A0A6J1IWN8 (uncharacterized protein LOC111479265 OS=Cucurbita maxima OX=3661 GN=LOC111479265 PE=4 SV=1) HSP 1 Score: 183 bits (465), Expect = 1.45e-57 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Csor.00g253870 vs. ExPASy TrEMBL
Match: A0A5A7U1L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001830 PE=4 SV=1) HSP 1 Score: 182 bits (461), Expect = 7.63e-57 Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Csor.00g253870 vs. ExPASy TrEMBL
Match: A0A1S3AWH5 (uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=4 SV=1) HSP 1 Score: 182 bits (461), Expect = 7.63e-57 Identity = 97/131 (74.05%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Csor.00g253870 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 43/117 (36.75%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Csor.00g253870 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Csor.00g253870 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 7.1e-12 Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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