Csor.00g253020 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g253020
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Proteasome subunit beta
Location	Csor_Chr06: 9925594 .. 9932142 (+)
RNA-Seq Expression	Csor.00g253020
Synteny	Csor.00g253020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACGCTTAGCTTTCGGGTAATGATTGTTACTCCCATTAAGCATTATTCCTGTTGAATATCGGCTGAGTCGATTGCTGATTACTTCTGTACTTAATATCGTGTTCTAATCATGAAAAGCTCTTGTTCTTGCAGGATTGGAAGAACTCGTCCTGTAAAGCGACGACATGTGGAGGATCGAGTAATATTTTTTTGGCTTCTTTTTCTCTTCATTTCTTGATTCTTTCTCTCTGTGTAGGAATACACATTGGTAGCACCTTTTTGTTTTTTTTCAGTGGATGTATGAATGATAGTTATTTACCCTAGGATGTGAAAGAGGTGAAAAACCCCAAAAAAGTTGAAGAAAAAGATTTGATTTATTACAGTGTGAAATCTGAATTTTCCCCCCTTTTCTCCTGCTGACTGCTGTGCATTTTTCATCACTTTTACTGTAAAAAGTTGGTTTTTTGTTCATTGTCTTCTCAGGCATGCCATCTTCTTTATGATGATAACACAAATGAACAAAACTAGAAAGACAAAGCAGGGGACAATGTTGCAGGTTTTGACAGTAATGGAAACCAAGATTCAGAAAAAAAGCCTTTGTTTTTGGTTTTGTTTTTTTTATATGTTCTAAATTTTTGAGCTCTTGGTATGACTGGGAACGACCTGTTTCTTATAAACGTGTGGAAACTTTTCCCTAATAGACGAGTTTTAAAACCTTAAGGAGAAGCATGAAAGGGAAAACTCAAAAAAGATGATATTTGTTAACAGCAGACTTGGGTTGTTACAAATGGTATTAGAGCTAGATACTGGACGGTGTGTCAGCGAGGATGTTGGACTTTGAGAGGGAGTGGATTTTGAGGTCCCTCGTTAGTTGGATAGGAGAATGAGTGTGTGGAAACCTCTTCCTAATGGACACGTTTTAAAATATTGAGGGGAAACCCAGAAGGGAAAGCCCAGAGAGGATAATATCTACTAACGGGAGACTTGGGTTGTTACAAATGGTATCAGTGTCAGATACTGGACGGTGTGACAGCGAGGATGTTGGACTTTGAAGTGGAGTGGATTTTGAGGTCCCTCGTCAGTTGGATAGGGGAATAAAGCATTCCTTATAAGTGTGTGGAAACCTTCTTAATGAAAGCGTTTTAAAATTTTGAGGGAAACCCAGAAAGGAAAGCCCAAAGATGATAATATCTACTAACGGTAGACTTGAACTGTTACAAATGGTACAGAGCCAGACACTGGACGGTGTGTCAGCGAGGATGCTGAGCCTCAAAAGGGAGTGGATTTTGAGGTCTCACATCAATGGGAGAGGGAAACGAAGCATTCCTTATAAGAGTGTGAAGATCTCTCTCTAATGAACGCGTTTTAAAACGTTATACGGTTACAAAATTGTTTCCCACTAGTTGACTGAAAGCAAAAGAAACAGCCTCAAAACATATGTAATCATAGGTAATGAATCCCTCAAAATGACACCCACCAGCCAATATTAAAAGCAGATTTGTCTGTCTGTGTCTATGGGATCCACAAAGCAAGCAAGCAAGCACACACTGCTAAAGAACCAGCTGCTGCCATTTCTTGCAGACCATATCATTTTGTCAAGAACATGCTTCACATTTACACATACATCAATTAAGTAAAGTCAGACTGGGAGGTCAACCTGTAACATATTCTATCATGAACGCCTCAAACACTCAAACTCCATTCAATTTTCTTGTTTGGTTTGAAACATTATGGTTGGAATTGGATGATTAGATGGGTTCGGCTGTTTACGATCTCGAGCTAAAGACTTCTTTTTTGTCCAATTGTGACTAATAATTAGATAAGAATTTAGATTTTGGATTCGGCACTTGATAGTTTCTGACATTCCTCTATATCTATCATATGACATAGTTATATTAATCACTCGTCTTGAACTGCTTTAAGATCGAAAATTGTTATCATAAACTAACACGAGTCTTTTAGGATGTTCTCTTCTCACTCACATGTTTCCTAGAAAATTTTTCAAGAGGTCACCAACATAGAATTGCTCAAAACTAATTATCGTTGTCAGCCTCACGGTTTTAAAACATGTTTTTGACTCTGATATCATTTGTGACCGTCCAAGCCCATTGCTAACAGATATTTTCTGCTTTGATCCATTTAATATAGGTAGATTTACATTAATAATTATTAAGAGACAGTCACGTTGTGACAGGACCTATTTATAATTTATTATATATTTAAATAACTAAAAAAATAGTGAAAATAAAATTATTAATGATTTTGAGATAAATTAATTATTTCTCCACAAAAATTTTTAAATAATTTTTTTTTTGAAATATATTTCTAAAATTTCATTATTATATGTTTAATCATTAAAATGAAAATGGGGCTTGGAGAGAACTTGGGCTTCAAGTCATTGCTAAGCATAATTGGAAAAGGAGGAACTCCCAAATTTCAGAGGCTTTGGAAAACCAGATCGATTTCAAGAAGAAGAAGAAGAAACAAGAAGGGATGGAGAGCGTATTCGGACTTGTGGGCAACGGATTCGTCATAGTGGCGGCGGATACATCGGCGGTGCACAGTATTTTGGTCCATAAATCCAATGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTCGCAGCTAGCGGCGAACCTGGCGACAGGTTTGAGATTTTTATTATTCAATTATTGTTTCTTCTCTAATCGTTTGCCTTTTGTCGATTGTGATCTTCGTTGTGTGATTGAATAGGGTTCAGTTCACCGAGTATATACAGAAGAATGTGTCTTTGTATCAGTTTCGCAATGGGATCCCCTTGACCACTGCTGCTGCTGCTAACTTCACTCGTGGTGAACTCGCAACCGCCTTGCGGAAGGTATATCATTTCTTATTACTATTACTTTTATCTGATTAAAATTTCAGCTAACCTTGAATTTTCGATCCTGGGCTTTGAGTTTACATCGGATAAGCGGTTTCAATCATTTGGTCATGATGATAATTTTTGAATGGTTCTGTCTTCAATCCAACTTTTTGGAGCTTAAAATTGTTCAAATGTCTAGACAGAGCGAGGAAATTTCTGTGTATCTTTAAGAATGACTCACAGTGAAGAAATTTTTAGGAAAACCCTCGATTTCTGTCATTTTTAAGAATGTCCACAGTGACAAGAAATTAGGCAGATAAACCTCTAGAGATATTGCATTCTATTAACACTTTGTTACTTGTTCTTTTTTTCTTGTATCAAGCTGATAATCATGACAATGTTTGTGTGTATTATATCCTGTTTCAGTCTTGCTCTTGGAATTGTCATCTTATTAGTTCATTCCTTATCATTAGGCAAGGCTTTCATTAAATCTTTGAATTAACAGTGACTTATGTCTTATAGGTCACCTCTTACTCTAGGAATTTCTTGTGGATTCTCGGTTTCTTTGTGATTCTATTTAATTTTACTCATGATTTTCCAAGTATTTTCCAAATGTAAGTGACTCTCATAAAAATCATTTCTTGTTTACTATCATACCTTCTTAGTTTTATCGAACTCATTCTTCATGGTGCGGCCCCAGCAAGCACGAGCATGGTCTCTTTTTTTAGTCTTTCTTTCTGAGGCGTGTACTTGCCAAATAACCAACCATCATGTTTCATCCCTATAACGAAGTTCATGGCGACTAGGGCAAAGATCACCTTTCTTTAAGGCTAAGCTAGGGTAGAGTTATGCAGCTATGATGTACTCTAGTGTAGATGAGCACACCGTGATGGAGTTCTACATAGTAATTTGGTTTTTGTTGCTCTGAGCAGAATAATAAATGATCCAATACTAGTTCTTTCTGCGTTTGTCTATAACTGCGATTGAGCTGTAAAAGGTATACAAGGAGTCTCGCGCTCCTAGCTTATTTGGTGTCATGGGAAATTAACTTGTTGGGTGGGTTGTAATTTAGAAAGACGAGCCTGATTTCAACTGTGAACTTTTGATTTTCAGAATCCATATTCCGTGAACATTCTTCTGGCGGGATATGACAAGGAAACTGGCCCATCCCTCTATTACATAGACTATATTGCCACCCTTCACAAGGTTGAGAAGGGAGCTTTTGGTTATGGGTCTTACTTTTCACTCGCCATGATGGATAGACATTACCATAGTGGCATGACAGAACAAGAAGCCATTGATTTGGTTGATAAATGCATACTGGAGATTAGGTCCAGGCTTGTTGTAGCCCCACCGAATTTCGTTATCAAGATTGTAGACAAGAACGGAGCTAGGGAGGTTGCTTGGCGCGAATCTATCAAGGATGGAGCTAGCTTTCCTTCAGCTTAAGATCTAAATGTTACATCTGCCGAGGCTTGCTTTTCTTGCTACCTTAACTTTGATGAGCTGCAAGCAGAGTGTATTCTACCCTTTTCTTCCCTAGTTTCAGACATTTCTATAGCGTAATGTTGCTGTTAACATTTCTTGTTCCTGAATACATGAGCAAACAAACAAAATGTGAACTTCTATAGGTTGATTTATCATCTGTTGTGCTGAAGTTCAAAGGTGCTACTTATGGTTTTATCATAATTGAGTTTGAAAAGTGGGAGATTTGAGAAAGCAAGATATTAACAAACCAGCTTCAGCGTCCAAAGAATTTGCTTTTCCCATTGCTTGAATTCATAAAGAACGTCCAAACAGATGACCTTACCTGAACAGGACCTGTTCTTTAGATCTCTTATTTGAGCTGTACAACTGTGACCTTGAGTTCATAATGAAGTCCGATTAGATTACTCTGTTTTATCTTCTCTAGTCTTTAGAAAGGTCAAATTACCATCCTAGCTTCCACTTTTATCTTTTCTAGTCTCTGATGATCTCCATTCTTATTGATACATGGATGCATTTTCTGCCTATCTATATATCATTATATACTACTCTTCGAATCTTTTTTTAACTTGAATAATGTGAAATATATTCCATTTTGGCAAGAGATTCCTCTAATTTTGAATGTGTCTCAAAATTTGAAAGAATTAGGGAGCATCATTTCATTTTTATGTGTCTCAAAATTTGAAAGAATTAAGGGAGCATCATTTCATTTTTGTATCAAGGAAGCAATTGGAGAGCTCAAGAGAATTAAGAATTCCCACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTTAATAGATATTGTCCACTTTGACCCGTTACATATTATCGTTAGCCTCACGATTTTAAAATGCGTCTAAGAGATTTTAACATCCTTATCTGAAATGCATATCCCTAGATTTTAACATCCTTATCTGAAATGCATACCCCTATTTTAATCAATGAAAAGGACGTGGCATCTGAAGAGGGAGGGACGGATCTTTTTACTTTCCAGCTCCCTTCATATTTTATGAAAATAATACCAATTTCTCAAAGGGTTAGGATTACGATTGACCAGACAGAAAGTTATAAAAGTCGAAGCCAAGAACAGTTGAAAGGTAAAACCCAGAATACGCTTCCTTCACGTCATTAATAAAGTTCAGCCATCTAAGTCTACAGCCTTGACGCCTAAGTTTTCTTGGGTTCTTTCCTGATGAAGAAATTGGTGGCCTTGTTAACCGACCCCCATATACCATTCATTAGGTGTCAAGGCCCCAAGTTTGAACAACTTTACCTCAAAAGCTCTTACCACAGAAAACTGTTAAGAAAGTAGGAGAAGTGGTTCACCAAATCAAACTTCTTTCCTTTTGTCCATTTCTTCCTTCCATTCCCTACAAAAACAGAACAATTCTGCTCTGAAACTTCACAAATCAAACTTTCTACCTTCTGAGTTCTCATCAAGTTGTTAACTGAAGCAATTGTAATAGTACTCCATAGAAGAATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCTGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGGTAAGCATTCAGTCATGTGTAAAATTTCTGGGCACCACTGCACATAAACAATGAGCAGGAGGATTATTTATGTATAGACATTAGGGTTATGAACAAATATCAAACTCTAACTAAAGTGCTAACTTTTAATACCTGAAAATTGCCAGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGTATGTACATGACAAACGCTTAACAGCGTGCTGTGTTGTTTTGTTCGCATGACAACTACATAATTAACGTACCTAATTGTATATGCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGA

mRNA sequence

ATGACGACGCTTAGCTTTCGGGATTGGAAGAACTCGTCCTGTAAAGCGACGACATGTGGAGGATCGAAGGCTTTGGAAAACCAGATCGATTTCAAGAAGAAGAAGAAGAAACAAGAAGGGATGGAGAGCGTATTCGGACTTGTGGGCAACGGATTCGTCATAGTGGCGGCGGATACATCGGCGGTGCACAGTATTTTGGTCCATAAATCCAATGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTCGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACCGAGTATATACAGAAGAATGTGTCTTTGTATCAGTTTCGCAATGGGATCCCCTTGACCACTGCTGCTGCTGCTAACTTCACTCGTGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCCGTGAACATTCTTCTGGCGGGATATGACAAGGAAACTGGCCCATCCCTCTATTACATAGACTATATTGCCACCCTTCACAAGGTTGAGAAGGGAGCTTTTGGTTATGGGTCTTACTTTTCACTCGCCATGATGGATAGACATTACCATAGTGGCATGACAGAACAAGAAGCCATTGATTTGGTTGATAAATGCATACTGGAGATTAGGTCCAGGCTTGTTGTAGCCCCACCGAATTTCGTTATCAAGATTGTAGACAAGAACGGAGCTAGGGAGAAGAATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCTGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGA

Coding sequence (CDS)

ATGACGACGCTTAGCTTTCGGGATTGGAAGAACTCGTCCTGTAAAGCGACGACATGTGGAGGATCGAAGGCTTTGGAAAACCAGATCGATTTCAAGAAGAAGAAGAAGAAACAAGAAGGGATGGAGAGCGTATTCGGACTTGTGGGCAACGGATTCGTCATAGTGGCGGCGGATACATCGGCGGTGCACAGTATTTTGGTCCATAAATCCAATGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTCGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACCGAGTATATACAGAAGAATGTGTCTTTGTATCAGTTTCGCAATGGGATCCCCTTGACCACTGCTGCTGCTGCTAACTTCACTCGTGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCCGTGAACATTCTTCTGGCGGGATATGACAAGGAAACTGGCCCATCCCTCTATTACATAGACTATATTGCCACCCTTCACAAGGTTGAGAAGGGAGCTTTTGGTTATGGGTCTTACTTTTCACTCGCCATGATGGATAGACATTACCATAGTGGCATGACAGAACAAGAAGCCATTGATTTGGTTGATAAATGCATACTGGAGATTAGGTCCAGGCTTGTTGTAGCCCCACCGAATTTCGTTATCAAGATTGTAGACAAGAACGGAGCTAGGGAGAAGAATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCTGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGA

Protein sequence

MTTLSFRDWKNSSCKATTCGGSKALENQIDFKKKKKKQEGMESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREKNGTGKDGDDSACCYRCRSLGRSSGTVGLYNVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY

Homology

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BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot
Match: O23714 (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana OX=3702 GN=PBD1 PE=1 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-92
Identity = 168/189 (88.89%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSIL+HK+NEDKIMVLDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLY+FRNGIPLTTAAAANFTRGELATALRKNPYSVNIL+AGYD E+G SLYYIDYI
Sbjct: 61  QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKV+KGAFGYGSYFSL+ MDRHY S M+ +EAI+LVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 230
           IVDK+GAR+
Sbjct: 181 IVDKDGARD 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot
Match: O24633 (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana OX=3702 GN=PBD2 PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.3e-92
Identity = 167/189 (88.36%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSIL+HK+ EDKIM LDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPL+TAAAANFTRGELATALRKNPYSVNIL+AGYDKE G SLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKV+KGAFGYGSYFSL+ MDRHY S M+ +EAI+LVDKCILEIRSRLV+APPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIK 180

Query: 221 IVDKNGARE 230
           IVDK+GARE
Sbjct: 181 IVDKDGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot
Match: Q9LST6 (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PBD1 PE=2 SV=2)

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-80
Identity = 145/189 (76.72%), Postives = 164/189 (86.77%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME V G+VG  F +VAADTSAV SILVHK++EDK+MVLDSHKL+ ASGEPGDRVQFTE+I
Sbjct: 1   MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKN+ LYQFRN IPL+TAA ANFTRGELATALRKNPY VN+LLAGYD + G SLYYIDYI
Sbjct: 61  QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           AT HK+EKGAFGYGSYF L++MD+ Y   M+ +EA+DLVDKCI EIR RLVVAP NF+IK
Sbjct: 121 ATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIK 180

Query: 221 IVDKNGARE 230
           IVDK GARE
Sbjct: 181 IVDKEGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot
Match: Q55DY7 (Proteasome subunit beta type-2 OS=Dictyostelium discoideum OX=44689 GN=psmB2 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.2e-46
Identity = 89/191 (46.60%), Postives = 130/191 (68.06%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME++      G V+  AD+S  HSI+  K +EDKI+ +D HKL+ ++GE GDRVQFTEYI
Sbjct: 1   METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKET---GPSLYYI 160
            KN+ LY  RN  P++T AAANF R ELAT++R +PYS+N++LAGYDKE    G SLYY+
Sbjct: 61  SKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYM 120

Query: 161 DYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNF 220
           DY+ +L K+  G  GY SYF L ++DRH+   ++ ++ I+L+  C  E+++R +V+   +
Sbjct: 121 DYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLEDGINLMHLCTTELKTRFLVS-GKY 180

Query: 221 VIKIVDKNGAR 229
            +K V   G +
Sbjct: 181 TLKFVSSEGIK 190

[Close]

BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot
Match: P49721 (Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.6e-44
Identity = 86/190 (45.26%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME + G+ G  +V+VA+D  A  +I+  K + DK+  +    L+   GE GD VQF EYI
Sbjct: 1   MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KNPYSVNILLAGYDKETGPSLYYIDY 160
           QKNV LY+ RNG  L+  AAANFTR  LA  LR + PY VN+LLAGYD+  GP+LYY+DY
Sbjct: 61  QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120

Query: 161 IATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVI 220
           +A L K    A GYG++ +L+++DR+Y   ++ + A++L+ KC+ E++ R ++  P F +
Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSV 180

Query: 221 KIVDKNGARE 230
           +I+DKNG  +
Sbjct: 181 RIIDKNGIHD 190

[Close]

BLAST of Csor.00g253020 vs. NCBI nr
Match: KAG6597434.1 (Proteasome subunit beta type-2-A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781 bits (2018), Expect = 7.79e-285
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MTTLSFRDWKNSSCKATTCGGSKALENQIDFKKKKKKQEGMESVFGLVGNGFVIVAADTS 60
           MTTLSFRDWKNSSCKATTCGGSKALENQIDFKKKKKKQEGMESVFGLVGNGFVIVAADTS
Sbjct: 1   MTTLSFRDWKNSSCKATTCGGSKALENQIDFKKKKKKQEGMESVFGLVGNGFVIVAADTS 60

Query: 61  AVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLTTAAA 120
           AVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLTTAAA
Sbjct: 61  AVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVSLYQFRNGIPLTTAAA 120

Query: 121 ANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLA 180
           ANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLA
Sbjct: 121 ANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLA 180

Query: 181 MMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREKNGTGKDGDDS 240
           MMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREKNGTGKDGDDS
Sbjct: 181 MMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREKNGTGKDGDDS 240

Query: 241 ACCYRCRSLGRSSGTVGLYNVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQ 300
           ACCYRCRSLGRSSGTVGLYNVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQ
Sbjct: 241 ACCYRCRSLGRSSGTVGLYNVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQ 300

Query: 301 VLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGS 360
           VLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGS
Sbjct: 301 VLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGS 360

Query: 361 KTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 399
           KTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY
Sbjct: 361 KTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 399

[Close]

BLAST of Csor.00g253020 vs. NCBI nr
Match: KAG5414491.1 (hypothetical protein IGI04_002058 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 457 bits (1176), Expect = 1.50e-157
Identity = 250/359 (69.64%), Postives = 280/359 (77.99%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSILVHK+NEDKIM LDSHKL+AASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILVHKNNEDKIMALDSHKLIAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNIL+AGYDKE G SLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKV+KGAFGYGSYFSL+ MDRH+ S M+ +EAI+LVDKCILEIRSRLV+APPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHFRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIK 180

Query: 221 IVDKNGAREKNGTGKDGDDSACCYRCRSLGRSSGTVGLYNVLISLSPCLNYITGNSSTPS 280
           IVDK+GARE                   +   S      NVLIS++PCL YITGNSS+PS
Sbjct: 181 IVDKDGAREH-----------AWLSMAVMSTVSAQSTCTNVLISMAPCLGYITGNSSSPS 240

Query: 281 QGCCTQLATVVRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASP 340
           Q CC+QLA V+RS  +CLC+VL GGG  LG+N N+TQALALP+ACNVQTP +S CN  S 
Sbjct: 241 QQCCSQLAHVIRSSGECLCEVLKGGGPHLGINFNKTQALALPKACNVQTPPVSLCNDDSS 300

Query: 341 TGSPAGSPESSNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY 399
             SP G    SN    G GSKTVP    +SS GSSI +S  LL ++L A +Y   +  Y
Sbjct: 301 VKSPTGP---SNTSEHGNGSKTVPG-HRSSSRGSSIKVSFSLL-AVLSAVSYIINYSRY 343

[Close]

BLAST of Csor.00g253020 vs. NCBI nr
Match: XP_022934380.1 (proteasome subunit beta type-2-A-like [Cucurbita moschata])

HSP 1 Score: 373 bits (957), Expect = 2.02e-126
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. NCBI nr
Match: XP_023539479.1 (proteasome subunit beta type-2-A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372 bits (954), Expect = 5.78e-126
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDK+TGPSLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKQTGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. NCBI nr
Match: XP_022974388.1 (proteasome subunit beta type-2-A-like [Cucurbita maxima] >XP_022975118.1 proteasome subunit beta type-2-A-like [Cucurbita maxima] >XP_022975478.1 proteasome subunit beta type-2-A-like [Cucurbita maxima] >XP_022975479.1 proteasome subunit beta type-2-A-like [Cucurbita maxima])

HSP 1 Score: 371 bits (953), Expect = 8.19e-126
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAAN+TRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANYTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDL+DKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLIDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL
Match: A0A6J1F7I3 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111441567 PE=3 SV=1)

HSP 1 Score: 373 bits (957), Expect = 9.79e-127
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL
Match: A0A6J1IJB4 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111474859 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 3.97e-126
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPLTTAAAAN+TRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLTTAAAANYTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDL+DKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLIDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL
Match: A0A5D3D072 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00590 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 1.13e-125
Identity = 186/189 (98.41%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNV+LYQFRNGIPLTTAAAANFTRGELATALRKNPYSVN+LLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNVLLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTE+EAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL
Match: A0A1S3AXK5 (Proteasome subunit beta OS=Cucumis melo OX=3656 GN=LOC103483693 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 1.13e-125
Identity = 186/189 (98.41%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNV+LYQFRNGIPLTTAAAANFTRGELATALRKNPYSVN+LLAGYDKETGPSLYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNVLLAGYDKETGPSLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTE+EAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL
Match: A0A0A0LA70 (Proteasome subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G146470 PE=3 SV=1)

HSP 1 Score: 368 bits (944), Expect = 9.22e-125
Identity = 185/189 (97.88%), Postives = 188/189 (99.47%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNV+LYQFRNGIPLTTAAAANFTR ELATALRKNPYSVNILLAGYDKETGPSLYY+DYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRSELATALRKNPYSVNILLAGYDKETGPSLYYVDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTE+EAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 229
           IVDKNGARE
Sbjct: 181 IVDKNGARE 189

[Close]

BLAST of Csor.00g253020 vs. TAIR 10
Match: AT3G22630.1 (20S proteasome beta subunit D1 )

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-93
Identity = 168/189 (88.89%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSIL+HK+NEDKIMVLDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLY+FRNGIPLTTAAAANFTRGELATALRKNPYSVNIL+AGYD E+G SLYYIDYI
Sbjct: 61  QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKV+KGAFGYGSYFSL+ MDRHY S M+ +EAI+LVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

Query: 221 IVDKNGARE 230
           IVDK+GAR+
Sbjct: 181 IVDKDGARD 189

[Close]

BLAST of Csor.00g253020 vs. TAIR 10
Match: AT4G14800.1 (20S proteasome beta subunit D2 )

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-93
Identity = 167/189 (88.36%), Postives = 179/189 (94.71%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSIL+HK+ EDKIM LDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 160
           QKNVSLYQFRNGIPL+TAAAANFTRGELATALRKNPYSVNIL+AGYDKE G SLYYIDYI
Sbjct: 61  QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120

Query: 161 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCILEIRSRLVVAPPNFVIK 220
           ATLHKV+KGAFGYGSYFSL+ MDRHY S M+ +EAI+LVDKCILEIRSRLV+APPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIK 180

Query: 221 IVDKNGARE 230
           IVDK+GARE
Sbjct: 181 IVDKDGARE 189

[Close]

BLAST of Csor.00g253020 vs. TAIR 10
Match: AT4G14800.2 (20S proteasome beta subunit D2 )

HSP 1 Score: 329.7 bits (844), Expect = 3.2e-90
Identity = 167/205 (81.46%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 41  MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 100
           ME VFGLVGNGF IVAADTSAVHSIL+HK+ EDKIM LDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60

Query: 101 QKNVSLYQFRNGIPLTTAAAANFTRGELATALRK----------------NPYSVNILLA 160
           QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK                NPYSVNIL+A
Sbjct: 61  QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKEFCATFQGYSDFCVLMNPYSVNILMA 120

Query: 161 GYDKETGPSLYYIDYIATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEQEAIDLVDKCIL 220
           GYDKE G SLYYIDYIATLHKV+KGAFGYGSYFSL+ MDRHY S M+ +EAI+LVDKCIL
Sbjct: 121 GYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCIL 180

Query: 221 EIRSRLVVAPPNFVIKIVDKNGARE 230
           EIRSRLV+APPNFVIKIVDK+GARE
Sbjct: 181 EIRSRLVIAPPNFVIKIVDKDGARE 205

[Close]

BLAST of Csor.00g253020 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-34
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0


Query: 260 NVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQVLNGGGSSLGVNINQTQAL 319
           N LIS+SPCLNYITGNS++P+Q CC QL+ VV+S P CLCQVLNGGGS LG+N+NQTQAL
Sbjct: 30  NALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQAL 89

Query: 320 ALPQACNVQTPSISSCNV-----ASPTGSPAGSPESSNNVPSGTGSKTVPSPDNN---SS 379
            LP+ACNVQTP +S CN       S + SPA SP SS     G GSKTVP  + +   SS
Sbjct: 90  GLPRACNVQTPPVSRCNTGGGGGGSTSDSPAESPNSSG---PGNGSKTVPVGEGDGPPSS 149

Query: 380 DGSSIHLSKPLLFSILLASTYASAF 397
           DGSSI  S PL+ +   A +Y + F
Sbjct: 150 DGSSIKFSFPLI-AFFSAVSYMAIF 170

[Close]

BLAST of Csor.00g253020 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-27
Identity = 73/133 (54.89%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 260 NVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQVLNGGGSSLGVNINQTQAL 319
           NVLIS++PCL++IT N+S PSQ CC QLA VVR   +CLCQVL+GGGS LG+N+N+TQAL
Sbjct: 28  NVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINVNETQAL 87

Query: 320 ALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGSKTVPSPDNNSSDGSSIHLS 379
           ALP+AC+V+TP  S C+  S   S         +   G GSKTVP  + +SSDG SI  S
Sbjct: 88  ALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVPR-EKSSSDG-SIKFS 147

Query: 380 KPLLFSILLASTY 393
            PLL +IL  ++Y
Sbjct: 148 FPLL-AILFTASY 148

The following BLAST results are available for this feature:

BLAST of Csor.00g253020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23714	1.5e-92	88.89	Proteasome subunit beta type-2-A OS=Arabidopsis thaliana OX=3702 GN=PBD1 PE=1 SV...	[more]
O24633	3.3e-92	88.36	Proteasome subunit beta type-2-B OS=Arabidopsis thaliana OX=3702 GN=PBD2 PE=1 SV...	[more]
Q9LST6	6.6e-80	76.72	Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PBD1 ...	[more]
Q55DY7	6.2e-46	46.60	Proteasome subunit beta type-2 OS=Dictyostelium discoideum OX=44689 GN=psmB2 PE=...	[more]
P49721	7.6e-44	45.26	Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1	[more]

BLAST of Csor.00g253020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597434.1	7.79e-285	100.00	Proteasome subunit beta type-2-A, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG5414491.1	1.50e-157	69.64	hypothetical protein IGI04_002058 [Brassica rapa subsp. trilocularis]	[more]
XP_022934380.1	2.02e-126	100.00	proteasome subunit beta type-2-A-like [Cucurbita moschata]	[more]
XP_023539479.1	5.78e-126	99.47	proteasome subunit beta type-2-A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974388.1	8.19e-126	98.94	proteasome subunit beta type-2-A-like [Cucurbita maxima] >XP_022975118.1 proteas...	[more]

BLAST of Csor.00g253020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7I3	9.79e-127	100.00	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111441567 PE=3 SV=1	[more]
A0A6J1IJB4	3.97e-126	98.94	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111474859 PE=3 SV=1	[more]
A0A5D3D072	1.13e-125	98.41	Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AXK5	1.13e-125	98.41	Proteasome subunit beta OS=Cucumis melo OX=3656 GN=LOC103483693 PE=3 SV=1	[more]
A0A0A0LA70	9.22e-125	97.88	Proteasome subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G146470 PE=3 SV=1	[more]

BLAST of Csor.00g253020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22630.1	1.1e-93	88.89	20S proteasome beta subunit D1	[more]
AT4G14800.1	2.4e-93	88.36	20S proteasome beta subunit D2	[more]
AT4G14800.2	3.2e-90	81.46	20S proteasome beta subunit D2	[more]
AT3G22600.1	1.5e-34	58.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G14815.1	1.0e-27	54.89	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 259..335 e-value: 2.2E-5 score: 33.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 263..335 e-value: 2.9E-15 score: 56.2
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 43..222 e-value: 4.0E-40 score: 137.3
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 41..231 e-value: 6.9E-53 score: 181.2
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 40..229
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 259..332 e-value: 5.2E-18 score: 66.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 260..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..374
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 41..228
None	No IPR available	PANTHER	PTHR11599:SF181	PROTEASOME SUBUNIT BETA TYPE-2-B	coord: 41..228
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 265..327 e-value: 3.36552E-26 score: 98.2678
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 45..92
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 41..222 score: 42.192085
IPR035206	Proteasome subunit beta 2	CDD	cd03758	proteasome_beta_type_2	coord: 41..229 e-value: 6.29306E-116 score: 334.168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g253020.m01	Csor.00g253020.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0010498	proteasomal protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity