Csor.00g252330 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g252330
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Glutaredoxin
Location	Csor_Chr06: 10251971 .. 10252279 (-)
RNA-Seq Expression	Csor.00g252330
Synteny	Csor.00g252330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGGATAGCGAAAGTGGCGTCACAGAAAGCGGTGGTGATATTCAGCAAGAGCTCGTGCTGCATGAGCCATGCAATCAAGCGGCTGTTTTACGACCAAGGGGTGAGCCCCGCCGTGTACGAGCTGGACGAGGACTCGAGAGGGAAGGAGATTGAGTGGGCTCTTTTACGCCTCGGCTGCAACCCCTCCGTGCCCGCCGTCTTCATCGGTGGTCGCTTCGTCGGCTCCGCCAATGCCATCATCACCCTCCACCTCAATGGCTGCCTCAACAAATTGCTCAAGGAAGCCGGCGCCCTTTGGCTCTGA

mRNA sequence

ATGGACCGGATAGCGAAAGTGGCGTCACAGAAAGCGGTGGTGATATTCAGCAAGAGCTCGTGCTGCATGAGCCATGCAATCAAGCGGCTGTTTTACGACCAAGGGGTGAGCCCCGCCGTGTACGAGCTGGACGAGGACTCGAGAGGGAAGGAGATTGAGTGGGCTCTTTTACGCCTCGGCTGCAACCCCTCCGTGCCCGCCGTCTTCATCGGTGGTCGCTTCGTCGGCTCCGCCAATGCCATCATCACCCTCCACCTCAATGGCTGCCTCAACAAATTGCTCAAGGAAGCCGGCGCCCTTTGGCTCTGA

Coding sequence (CDS)

ATGGACCGGATAGCGAAAGTGGCGTCACAGAAAGCGGTGGTGATATTCAGCAAGAGCTCGTGCTGCATGAGCCATGCAATCAAGCGGCTGTTTTACGACCAAGGGGTGAGCCCCGCCGTGTACGAGCTGGACGAGGACTCGAGAGGGAAGGAGATTGAGTGGGCTCTTTTACGCCTCGGCTGCAACCCCTCCGTGCCCGCCGTCTTCATCGGTGGTCGCTTCGTCGGCTCCGCCAATGCCATCATCACCCTCCACCTCAATGGCTGCCTCAACAAATTGCTCAAGGAAGCCGGCGCCCTTTGGCTCTGA

Protein sequence

MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLGCNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL

Homology

[Close]

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot
Match: Q9LIF1 (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.8e-41
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD +A++ASQ+AVVIFSKS+CCMSHAIKRLFY+QGVSPA+ E+D+D  GK+IEWAL RLG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VPAVF+GG+FVG+AN ++TLHLNG L  LLKEAGALWL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.6e-33
Identity = 67/102 (65.69%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD I K+  ++ VVI+SKSSCCMSH IK L  D G +PAVYELDE SRG+EIE ALLRLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG  VG AN +++LHLNG L  +LK AGALW+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.6e-33
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+ + K+ S+K+VVIFSK+SCCMSH IK LF D GV+P +YELDE SRGKEIE AL +LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK AGALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot
Match: O23419 (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-32
Identity = 65/102 (63.73%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD++ K+ S+K+VVIFSK+SCCMSH IK LF D GV+P +YELDE +RGKEIE AL +LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK  GALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot
Match: O23417 (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana OX=3702 GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-32
Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M++I K+ S+K+VVIFS +SCCMSH IK LF D GV+P +YELDE +RGKEIE+AL +LG
Sbjct: 1   MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK  GALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102

[Close]

BLAST of Csor.00g252330 vs. NCBI nr
Match: XP_022944909.1 (monothiol glutaredoxin-S10-like [Cucurbita moschata] >XP_022973704.1 monothiol glutaredoxin-S10-like [Cucurbita maxima] >XP_023540480.1 monothiol glutaredoxin-S10-like [Cucurbita pepo subsp. pepo] >KAG6597502.1 Monothiol glutaredoxin-S10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208 bits (529), Expect = 1.04e-67
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. NCBI nr
Match: NP_001275534.1 (monothiol glutaredoxin-S10-like [Cucumis sativus] >XP_008438822.1 PREDICTED: monothiol glutaredoxin-S10-like [Cucumis melo] >KAA0049452.1 monothiol glutaredoxin-S10-like [Cucumis melo var. makuwa] >AGX01497.1 glutaredoxin [Cucumis sativus] >KGN57081.1 hypothetical protein Csa_010184 [Cucumis sativus] >TYK16131.1 monothiol glutaredoxin-S10-like [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (522), Expect = 1.22e-66
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MERIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. NCBI nr
Match: XP_038905584.1 (monothiol glutaredoxin-S10-like [Benincasa hispida])

HSP 1 Score: 203 bits (517), Expect = 7.04e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALL LG
Sbjct: 1   MERIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLHLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. NCBI nr
Match: XP_023527596.1 (monothiol glutaredoxin-S10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (506), Expect = 3.36e-64
Identity = 95/102 (93.14%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+R+AKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELD+DSRGKEIEWAL RLG
Sbjct: 1   MERVAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDQDSRGKEIEWALRRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRF+GSANAIITLHLNGCL+KLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFIGSANAIITLHLNGCLDKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. NCBI nr
Match: XP_022956057.1 (monothiol glutaredoxin-S10-like [Cucurbita moschata])

HSP 1 Score: 196 bits (497), Expect = 7.93e-63
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELD+DSRGKEIEWAL RLG
Sbjct: 1   MKRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDQDSRGKEIEWALRRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGG+F+G+ANAIITLHLNGCL+KLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGQFIGTANAIITLHLNGCLDKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL
Match: A0A6J1IFF3 (monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111472287 PE=3 SV=1)

HSP 1 Score: 208 bits (529), Expect = 5.03e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL
Match: A0A6J1FZG5 (monothiol glutaredoxin-S10-like OS=Cucurbita moschata OX=3662 GN=LOC111449297 PE=3 SV=1)

HSP 1 Score: 208 bits (529), Expect = 5.03e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL
Match: U3RBS4 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX5 PE=2 SV=1)

HSP 1 Score: 205 bits (522), Expect = 5.89e-67
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MERIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL
Match: A0A5D3CW51 (Monothiol glutaredoxin-S10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00560 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 5.89e-67
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MERIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL
Match: A0A1S3AXZ6 (monothiol glutaredoxin-S10-like OS=Cucumis melo OX=3656 GN=LOC103483808 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 5.89e-67
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+RIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG
Sbjct: 1   MERIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102
           CNP+VPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL
Sbjct: 61  CNPAVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-42
Identity = 76/102 (74.51%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD +A++ASQ+AVVIFSKS+CCMSHAIKRLFY+QGVSPA+ E+D+D  GK+IEWAL RLG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VPAVF+GG+FVG+AN ++TLHLNG L  LLKEAGALWL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-34
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M+ + K+ S+K+VVIFSK+SCCMSH IK LF D GV+P +YELDE SRGKEIE AL +LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK AGALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csor.00g252330 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-34
Identity = 67/102 (65.69%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD I K+  ++ VVI+SKSSCCMSH IK L  D G +PAVYELDE SRG+EIE ALLRLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG  VG AN +++LHLNG L  +LK AGALW+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Csor.00g252330 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 9.2e-34
Identity = 65/102 (63.73%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           MD++ K+ S+K+VVIFSK+SCCMSH IK LF D GV+P +YELDE +RGKEIE AL +LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK  GALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Csor.00g252330 vs. TAIR 10
Match: AT4G15660.1 (Thioredoxin superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-33
Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRIAKVASQKAVVIFSKSSCCMSHAIKRLFYDQGVSPAVYELDEDSRGKEIEWALLRLG 60
           M++I K+ S+K+VVIFS +SCCMSH IK LF D GV+P +YELDE +RGKEIE+AL +LG
Sbjct: 1   MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLG 60

Query: 61  CNPSVPAVFIGGRFVGSANAIITLHLNGCLNKLLKEAGALWL 103
           C+P+VP VFIGG+ VG AN +++LHLN  L  +LK  GALWL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102

The following BLAST results are available for this feature:

BLAST of Csor.00g252330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIF1	5.8e-41	74.51	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1	[more]
Q8L8Z8	7.6e-33	65.69	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]
O23421	7.6e-33	64.71	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]
O23419	1.3e-32	63.73	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1	[more]
O23417	3.8e-32	62.75	Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana OX=3702 GN=GRXS8 PE=3 SV=1	[more]

BLAST of Csor.00g252330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944909.1	1.04e-67	100.00	monothiol glutaredoxin-S10-like [Cucurbita moschata] >XP_022973704.1 monothiol g...	[more]
NP_001275534.1	1.22e-66	98.04	monothiol glutaredoxin-S10-like [Cucumis sativus] >XP_008438822.1 PREDICTED: mon...	[more]
XP_038905584.1	7.04e-66	97.06	monothiol glutaredoxin-S10-like [Benincasa hispida]	[more]
XP_023527596.1	3.36e-64	93.14	monothiol glutaredoxin-S10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956057.1	7.93e-63	92.16	monothiol glutaredoxin-S10-like [Cucurbita moschata]	[more]

BLAST of Csor.00g252330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFF3	5.03e-68	100.00	monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111472287 PE=3...	[more]
A0A6J1FZG5	5.03e-68	100.00	monothiol glutaredoxin-S10-like OS=Cucurbita moschata OX=3662 GN=LOC111449297 PE...	[more]
U3RBS4	5.89e-67	98.04	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX5 PE=2 SV=1	[more]
A0A5D3CW51	5.89e-67	98.04	Monothiol glutaredoxin-S10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3AXZ6	5.89e-67	98.04	monothiol glutaredoxin-S10-like OS=Cucumis melo OX=3656 GN=LOC103483808 PE=3 SV=...	[more]

BLAST of Csor.00g252330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21460.1	4.1e-42	74.51	Glutaredoxin family protein	[more]
AT4G15700.1	5.4e-34	64.71	Thioredoxin superfamily protein	[more]
AT5G18600.1	5.4e-34	65.69	Thioredoxin superfamily protein	[more]
AT4G15680.1	9.2e-34	63.73	Thioredoxin superfamily protein	[more]
AT4G15660.1	2.7e-33	62.75	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..101 e-value: 2.9E-28 score: 99.7
None	No IPR available	PANTHER	PTHR10168:SF115	MONOTHIOL GLUTAREDOXIN-S10	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 21.481295
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 4.75807E-38 score: 120.722
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 8.6E-14 score: 51.5
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 5..102 e-value: 7.1E-42 score: 139.4
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g252330.m01	Csor.00g252330.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000122	negative regulation of transcription by RNA polymerase II
molecular_function	GO:0008794	arsenate reductase (glutaredoxin) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity