
Csor.00g252090 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATAAGGTGCTGGTGATTGGCGTCGATGAAACTGAGCACAGCTTCTACGCCTTGAGGTGGATGCTCCAACATTTCTTTGGCCCTAACGATATTCCTCACAATCTTGTTATTGTCCACGCTAAACCACCTCCTTCTAGCGTTCTTGCAATTTCCGGTCCAGGTATACCGATTCTCCTGATCTCTATTTTGCCTTTAACGAGTCTGTTTTCCATTTGGTTCCGATGAAATGAACTTGAAGAGTAAGTTAGAATTTATGTTGATTCATGAACGATGGTATCGAACACAGTGAAAACTGAATTTATTGATCTTCTTGATTTTGAGTATCGAGATGTGACGAGATAATGAAATTATTTTGAGTTTTGCTGTGACGAGAGAATGAAATTTATTGATCTTCTTGTTGTTCCATTTGGCTCCGCTGCAATGAACTCGAAGAATAAGTAAGAATTGATGTTGATTCATGAACGATGGTATCAAACAAAGTGAAAACTGAACTTACTGATGTTCTTGATTTTGAGTATCGAGATGTGAAGAGAGAATGAAATTATTTAGAGTTTTGCTGTGTACAGTTGAAGCGAATCGAGAAGTCTGTATTGAATGGAAATGATCCATTTGGGGATGGTATTGAACAGAAATCTTATCTACCTTGTTGTGTTGTTCTGTAAATGATTTATAACGTTTTCCCAGAACGATTATCATGTTTGTAACAAAATGTTGAAATACAGCCGCCGAGAATGTTTTGCCCTTGCTAGATGAAGATTTGAAGAAAATTGGCAACAGGACTGTCCAAAGAGCGAAGGAAATATGCATTGAACACAAGGTAACTTCCAATTTCATTGAAAAAATTTATGATTACACCACATTAATCTCCAGCTAGAATTGGCTACTTAAAAAGCCGTTCCCCAAATAGTGACCTGAATTGCATTGCTCTTAATCTGCTTCCCTTCTGATTGATGATTGAATTACTTGTTTACAAACTTAAAACTTCATTGATTAAAAAGTTCATTCTCCATTGATTAAAACATATATTTTGATGGGTGGATCGAGGTAAGACTTGAATCTTCACCCAACATTCTTCGATTACTTTTGATTAACTTTAAGTTCAGTTTTTGAACTAAACATATATTTTGATTGGTGGATCAAGTGGTAAGACTTGAATCTTCACCCAACATTCTTCGATTACTTTTGATTAAACTTTAAGTTTGGTCTTTGAACTAAACATATATTTTGATTGGTGGATCAAGTGGTAAGACTTGAATCTTCATCCTAATTCTTTAATTTAATTACTTTTAGATTAAACTTTAAGTTTGGTCTTTGAACTAAACATATAATTTGATGGGTGGATCAAGTGGTAAGACTGAATCTTCACCCTACATTCTTCAATTACTTTTACATTAAATTATGAGTTCGGTCTTTGAACTAAACATACATTTTGATTGATGGATCAAGTGGCAAGACTTTCACCCTACGTTCTTCAATTACTTTTACATTAAATTATGAGTTCGGTCTTTGAACTAAACATACATTTTGATTGATGGATCAAGTGGCAAGACTTTCACCCTACGTTCTTCAATTACTTTTAGATTAAATTATAAGTTCAATTACTCTTATATGAAGTGAGTTGAAATAGGAGCACCATCTATTGTGCAAAATCTGTAGCATACCCATTTAGCATGTTCATGGAGATAATATTCTGCCTTTGTAGGTCCAAAACGTGACGACTGAAGTTGTGGAGGGTGATGCCAGGAATGTAATGTGCGATGCAGTAGAAAAGCACCATGCGTCCCTTTTGGTTGTTGGAAGTCATAACTATGGAGTAGTAAAAGGGTAAGACTCCCCTTACTACAAGAATCGAAATATCCATCCTAGTAGAAAGAACCAAGTGATCGATTCAAATTGTTTTTGTTGAACAGGATGAACCTGGGCAGTGTAAGTGCCTACTGTGCTCACCATGCCCATTGCTCCGTTATGATTGTGAAGAGGCCACCCAAACCCATGGAGTGA ATGGCTGATAAGGTGCTGGTGATTGGCGTCGATGAAACTGAGCACAGCTTCTACGCCTTGAGGTGGATGCTCCAACATTTCTTTGGCCCTAACGATATTCCTCACAATCTTGTTATTGTCCACGCTAAACCACCTCCTTCTAGCGTTCTTGCAATTTCCGGTCCAGCCGCCGAGAATGTTTTGCCCTTGCTAGATGAAGATTTGAAGAAAATTGGCAACAGGACTGTCCAAAGAGCGAAGGAAATATGCATTGAACACAAGGTCCAAAACGTGACGACTGAAGTTGTGGAGGGTGATGCCAGGAATGTAATGTGCGATGCAGTAGAAAAGCACCATGCGTCCCTTTTGGTTGTTGGAAGTCATAACTATGGAGTAGTAAAAGGGATGAACCTGGGCAGTGTAAGTGCCTACTGTGCTCACCATGCCCATTGCTCCGTTATGATTGTGAAGAGGCCACCCAAACCCATGGAGTGA ATGGCTGATAAGGTGCTGGTGATTGGCGTCGATGAAACTGAGCACAGCTTCTACGCCTTGAGGTGGATGCTCCAACATTTCTTTGGCCCTAACGATATTCCTCACAATCTTGTTATTGTCCACGCTAAACCACCTCCTTCTAGCGTTCTTGCAATTTCCGGTCCAGCCGCCGAGAATGTTTTGCCCTTGCTAGATGAAGATTTGAAGAAAATTGGCAACAGGACTGTCCAAAGAGCGAAGGAAATATGCATTGAACACAAGGTCCAAAACGTGACGACTGAAGTTGTGGAGGGTGATGCCAGGAATGTAATGTGCGATGCAGTAGAAAAGCACCATGCGTCCCTTTTGGTTGTTGGAAGTCATAACTATGGAGTAGTAAAAGGGATGAACCTGGGCAGTGTAAGTGCCTACTGTGCTCACCATGCCCATTGCTCCGTTATGATTGTGAAGAGGCCACCCAAACCCATGGAGTGA MADKVLVIGVDETEHSFYALRWMLQHFFGPNDIPHNLVIVHAKPPPSSVLAISGPAAENVLPLLDEDLKKIGNRTVQRAKEICIEHKVQNVTTEVVEGDARNVMCDAVEKHHASLLVVGSHNYGVVKGMNLGSVSAYCAHHAHCSVMIVKRPPKPME Homology
BLAST of Csor.00g252090 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 9.0e-09 Identity = 48/167 (28.74%), Postives = 75/167 (44.91%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.5e-07 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 9.4e-06 Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Csor.00g252090 vs. NCBI nr
Match: XP_022937984.1 (universal stress protein PHOS34-like [Cucurbita moschata] >KAG6597526.1 hypothetical protein SDJN03_10706, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028983.1 hypothetical protein SDJN02_10166 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327 bits (837), Expect = 6.55e-113 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Csor.00g252090 vs. NCBI nr
Match: XP_022973665.1 (universal stress protein PHOS34-like [Cucurbita maxima] >XP_022975168.1 universal stress protein PHOS34-like [Cucurbita maxima]) HSP 1 Score: 325 bits (833), Expect = 2.67e-112 Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of Csor.00g252090 vs. NCBI nr
Match: XP_023539948.1 (universal stress protein PHOS34-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323 bits (829), Expect = 1.09e-111 Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of Csor.00g252090 vs. NCBI nr
Match: XP_038904684.1 (universal stress protein PHOS34-like isoform X2 [Benincasa hispida]) HSP 1 Score: 261 bits (666), Expect = 8.32e-87 Identity = 122/157 (77.71%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of Csor.00g252090 vs. NCBI nr
Match: XP_038904675.1 (universal stress protein PHOS34-like isoform X1 [Benincasa hispida]) HSP 1 Score: 256 bits (653), Expect = 7.71e-85 Identity = 121/157 (77.07%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy TrEMBL
Match: A0A6J1FCR8 (universal stress protein PHOS34-like OS=Cucurbita moschata OX=3662 GN=LOC111444203 PE=4 SV=1) HSP 1 Score: 327 bits (837), Expect = 3.17e-113 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy TrEMBL
Match: A0A6J1IBY1 (universal stress protein PHOS34-like OS=Cucurbita maxima OX=3661 GN=LOC111472250 PE=4 SV=1) HSP 1 Score: 325 bits (833), Expect = 1.29e-112 Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy TrEMBL
Match: A0A6J1CC29 (universal stress protein PHOS34-like OS=Momordica charantia OX=3673 GN=LOC111009340 PE=4 SV=1) HSP 1 Score: 254 bits (650), Expect = 1.50e-84 Identity = 119/158 (75.32%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy TrEMBL
Match: A0A0A0LAL5 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G154380 PE=4 SV=1) HSP 1 Score: 224 bits (570), Expect = 1.54e-72 Identity = 109/158 (68.99%), Postives = 127/158 (80.38%), Query Frame = 0
BLAST of Csor.00g252090 vs. ExPASy TrEMBL
Match: A0A5D3CXU5 (Universal stress protein A-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001080 PE=4 SV=1) HSP 1 Score: 220 bits (561), Expect = 3.50e-71 Identity = 110/159 (69.18%), Postives = 127/159 (79.87%), Query Frame = 0
BLAST of Csor.00g252090 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 170.6 bits (431), Expect = 9.8e-43 Identity = 81/150 (54.00%), Postives = 101/150 (67.33%), Query Frame = 0
BLAST of Csor.00g252090 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23 Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 0
BLAST of Csor.00g252090 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 0
BLAST of Csor.00g252090 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 5.1e-23 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 0
BLAST of Csor.00g252090 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 6.6e-23 Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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