Csor.00g251870 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g251870
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	acyl-CoA dehydrogenase-related
Location	Csor_Chr06: 10496130 .. 10499603 (-)
RNA-Seq Expression	Csor.00g251870
Synteny	Csor.00g251870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACACTGTCAATTCTATTGAGATTGCACAATCTTCGGTACCGTTGATTGATTTCATCTTTGGCAATGCTTTTGTCTACGGCAGTAAGATCTTAGTAAAGAGCCCACTGGTATTGTCCTCCAAAATTGCACCATCTCTTTTGACCTTGAGTTCTACCCCATTTGCCATACTAGTAAGTCCTACCTTGGTCGCCCATGGAAGCAGTATTCAAGAACTGCAATCATGTAATGCCAAAGACTTGATCCATCCTCAAAGTTGGATGCTATAGAGTGATGATTATACTCTCAAGACTAAATCAGATTAAATTGTTATACACTACAATTTCATAAAGTATTCTATCTGGTCTAACAACAGCTACCCAATATTCGAAGAATTATAGATGAATGTACAAAAAGAATTAAATTATGTGAACCGAGAACTCAACATGAGACAAGTTCACCCAACAACCGACCACCAAGTCAAGTGGGGAGCATCCAAGCAAGTTCACCCAACAACTGACCAAGTCAAATGGGGAATGCTGGATATCTAGAAAAGTTTGGGTAGAGCCGGATTTAAATGTTGGCCAGGTAAACCATCCCCATGGGGGTGGTGAAGGGAGAGCCCCAATTGGTAGAAAAAAAAACCCCAACCAATTGGAGTTATCCTGCACTTGGAAGAAGAAATAGAAAAAGGAATAAATAAATATAGACCCGACAACAGAAGCATCTAGGTAAGTTTAACCAACAATTGATCAAGTCAAGAGTCAGAACGGTGCCATATGACAAAAGTTGGTGCCATATGACAAAGAGAAGTCAGAAGTTCACCCAACAACTAACCAAGTCAAGAGTCATGGTGCCATATAACAAAAGAGAAGTCAGAAGCATTCGCTCAAACTTGTCTCCAAGCTGACGGAAGACGTCAACAATATCCAACAACTGATCAAGTCAAGAGTTAGAACCTGATGCCATATGACAAGAGAGAAGTAAGAAGCATCTAGAGGCAAGTTCACCCAACAATATCCAACAACTGATCAAGTCAAGAGTCAGAACCTGATGCCATATGACAAGAGAGAAGTAAGAAGCATCTAGAGGCAAGTTCACCCAACAACTGACCAAGTCAGAAGTCGTGGTGCCATATGACAAGAGAAGTCAGAAGTATCCACTCGAACTTGTCTCCAAGCTGACGGAAGACGTTAGCAAGATTCAACAACTGACCAAGTCAAGAGTCAGAACGTGGTGCCATATGACAAAAGAGAAGTCAGAAGCATCCAGAGGCAAGTTCACCCAACAATTGACCAAGTCAAGAATCGTGGTGCCATATGACAAAAGAGAAGTTAGAAGCATCTACTCGAACTTGTCTCCAAGCTGACGGAAGACATCAGCAAGATGAGCATTATGACAAAAGATAGTCAGGTGTTTAATAATTTTATACATTTCTGAAACACAACCAATTCCAGCGAGTCGAGTCGGCAACAGTCAGAGAGTTCGGATCGTCATCAGGACGATGCCGAGATTGCGTAGGGGAGAATTTCACAATTAGTGGGGCAAATGCGCCCCGAGAAAGTCATCGAGGACGATGACTAAATTAAGTGGGGGAGAATGTCACAATCTGCAATATAATTTTGCCCGAGTAAGTCATCGAGGACGATGACTAAGTTAAGTGGGGGAGAATGTCACAACCATACTAGGAAGAGAGTAGGTTGTGACCCTTGCGTCATGACAAGCAAAGTGGCGTCCCTCAAGAGACGCCCATCCGGCCACATGCGGGCCAATATAGAAGAGTGTCATGATGCGATCGAGGAGGACGATGCATCATCCAACGCACCACCACACGAAGTGGGAATTGAAGACAAGTTGAGACATAAGTAAGATAGAGACATTGAATAGACATGGAGAGCAAAGATAGGCTTGTTGATGGGCCGGGTAGGGCCCCAGCCTTTAACCTAAAAAAGTCGGGGTTTAAGAAGGAATTTGGGCATGCGGTTCGAGAGTTAAGTCCGTCCGTATGAAATATGAATGCTCGCTAAGTTTGGGGTCAATCGGACACCGGACGGACAATGCACAACACCGTATGACCGTTCACCAAAATCATGTCTATGCCTCGAAGATTAAAAATGGCTCAAAATGTACTGTAGGGGTACCATGGTGTTAGCTCTCCACCACCCCTAGGCCTTGTGACCTAAGTGAGCTACCTTGTGGCACATACGTGTGTCACAGTGTGGGCGAGCGTGCCAAGATGAGTGTTTCGGGCAATTTCCTTTGAAATGAATTTTTGTAGGATAGTACCGGACGGCACAGATGTGCCGGTATTGCGCCCTAGCCCGCGTGTTAGAGGTTGTTACATACACCCGCTATCCGGTACGGTATTCGTAAATGACTCGGCATGGGCACGGGAGGGCCAATGCCTTGATAGAACCCGGATGGATGGATGTTCGGGAAGTCCCAATGAGATGAAAGACACGCGGGCCCATTCTCAATGGCATGACCGAGCGAGTTATGATGGCCGACGACATCCTGAGACTCGGGATGGCATCAAGACATATGGACCCTGTCGATGGGGATCGAGATGAAAAGATGAGATGCGACGTTGCATTGAGAGACCTTGGCTCAAGCAGAGGCAAGGTCGAGCCGAATGACTTGGCCTAGTGTAGAGGTAAATTGGATGTGTTGCAGACAATTGAACATGCATGTGCAGGCGGCGTGTGTGGTTGAACAAGTTTGGATTCCGCATAAGCGATATTCGATTGGCGAAGACAAACTTCGCCTAAGGTCCGACGAAGCCACAAAGCTGGAGTGAAAAATATATATGGGGCTTGATTCCCCTTAGGGCTAGTCGTGAGCGTGTCAAAATCACGATGCCACACGGTAAAAAATGTAGGACCGTGACACTGAGCAGAGTTCCTTCCTTTCAAACAATGCCAGTATTTGGATATAGTAGCCACATGATTGCCCCCAAAATCTATAACAATTTTTTAGAGAATGACTATGTTTGTGTCAGTGTCGCGTGAAACTTGAGGGAACGAGATTGCTAGTCTTGGAAGCAGCTGATCAGTTAGATCGACTAGGAAACAAGAAAGCACGTGAGACAATTGCAATGGCAAGGTAAATTTTCTTACATCTAATCGAAGTTATTTAAGTTCATGATCTTTCATAAATGCTTTAAACCTATCTTTGGAGTAGAAGAATCACTAGAATATTGAACAAAAAGCCAACCTATCTAATTGTCGTTCTTTCGGACTTACAAACATCTTAGTTACCACGGTATCTTCATTTTTTTTGTTAACCATTTAACAGATTTCTACCCTTCTCCTTTCTCATTTTTTCCTTTTTTTTGACAACGTCTTCATTAATATCTTGGTGAAACATGGCACAGGTTGCAGGAACCAAATATGGCATTGCTGATTCTGGACATGCCAATGCAAGTTCATGGTGCAGGTGGCTTATCTTCTGACACTGTCCTTGCTCATCTCTGGGCTACTGCAAGAACCTTTTGA

mRNA sequence

ATGCACACTGTCAATTCTATTGAGATTGCACAATCTTCGGTACCGTTGATTGATTTCATCTTTGGCAATGCTTTTGTCTACGGCAGTAAGATCTTAGTAAAGAGCCCACTGGTATTGTCCTCCAAAATTGCACCATCTCTTTTGACCTTGAGTTCTACCCCATTTGCCATACTATGTCGCGTGAAACTTGAGGGAACGAGATTGCTAGTCTTGGAAGCAGCTGATCAGTTAGATCGACTAGGAAACAAGAAAGCACGTGAGACAATTGCAATGGCAAGGTTGCAGGAACCAAATATGGCATTGCTGATTCTGGACATGCCAATGCAAGTTCATGGTGCAGGTGGCTTATCTTCTGACACTGTCCTTGCTCATCTCTGGGCTACTGCAAGAACCTTTTGA

Coding sequence (CDS)

ATGCACACTGTCAATTCTATTGAGATTGCACAATCTTCGGTACCGTTGATTGATTTCATCTTTGGCAATGCTTTTGTCTACGGCAGTAAGATCTTAGTAAAGAGCCCACTGGTATTGTCCTCCAAAATTGCACCATCTCTTTTGACCTTGAGTTCTACCCCATTTGCCATACTATGTCGCGTGAAACTTGAGGGAACGAGATTGCTAGTCTTGGAAGCAGCTGATCAGTTAGATCGACTAGGAAACAAGAAAGCACGTGAGACAATTGCAATGGCAAGGTTGCAGGAACCAAATATGGCATTGCTGATTCTGGACATGCCAATGCAAGTTCATGGTGCAGGTGGCTTATCTTCTGACACTGTCCTTGCTCATCTCTGGGCTACTGCAAGAACCTTTTGA

Protein sequence

MHTVNSIEIAQSSVPLIDFIFGNAFVYGSKILVKSPLVLSSKIAPSLLTLSSTPFAILCRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSDTVLAHLWATARTF

Homology

[Close]

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot
Match: Q8RWZ3 (Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis thaliana OX=3702 GN=IBR3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-23
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 60  RVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSD 119
           RV+LEGTRLLVLEAAD LD+ GNKKAR  +AMA++  PNMAL +LD  +QVHGA G+SSD
Sbjct: 727 RVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVSSD 786

Query: 120 TVLAHLWATART 132
           TVLAHLWATART
Sbjct: 787 TVLAHLWATART 798

[Close]

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot
Match: Q5ZHT1 (Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus OX=9031 GN=ACAD11 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR+ +E  RLL L+ A ++D LGN+KAR+ +AM ++  P   L ++D  +QV G  G+S 
Sbjct: 674 CRLSIEQARLLTLKTASKIDTLGNRKARKEVAMTKVVVPRAVLKVIDCAIQVCGGAGVSQ 733

Query: 119 DTVLAHLWATART 132
           D  LA ++A  RT
Sbjct: 734 DFPLASMFAYIRT 746

[Close]

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot
Match: Q6JQN1 (Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens OX=9606 GN=ACAD10 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 60   RVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSD 119
            RV++E  RLLVL AA  +D  GNK A   IAM ++  P+MA  ++D  +Q  GA GLSSD
Sbjct: 964  RVEIEQARLLVLRAAHLMDLAGNKAAALDIAMIKMVAPSMASRVIDRAIQAFGAAGLSSD 1023

Query: 120  TVLAHLWATAR 131
              LA  +  AR
Sbjct: 1024 YPLAQFFTWAR 1034

[Close]

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot
Match: Q80XL6 (Acyl-CoA dehydrogenase family member 11 OS=Mus musculus OX=10090 GN=Acad11 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 60  RVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSD 119
           R+ +E  RLL L+AA  +D LG+  AR+ IAM ++  P     I D  +QVHG  G+S D
Sbjct: 677 RIAIEEIRLLTLKAAHSIDTLGSASARKEIAMIKVAAPKAVCKIADWAIQVHGGAGVSQD 736

Query: 120 TVLAHLWATART 132
             LA+++A  RT
Sbjct: 737 YPLANMYAIIRT 748

[Close]

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot
Match: Q8K370 (Acyl-CoA dehydrogenase family member 10 OS=Mus musculus OX=10090 GN=Acad10 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 60   RVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSD 119
            RV++E  RLLVL+AA  +D  GNK A   IAM ++  P+MA  ++D  +Q  GA GLSSD
Sbjct: 964  RVEIEQARLLVLKAAHLMDVAGNKTAALDIAMIKMVVPSMAYHVIDRAIQAFGAAGLSSD 1023

Query: 120  TVLAHLWATAR 131
              LA  +  AR
Sbjct: 1024 YPLAQFFGWAR 1034

[Close]

BLAST of Csor.00g251870 vs. NCBI nr
Match: KAG6597548.1 (putative acyl-CoA dehydrogenase IBR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251 bits (640), Expect = 1.12e-83
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MHTVNSIEIAQSSVPLIDFIFGNAFVYGSKILVKSPLVLSSKIAPSLLTLSSTPFAILCR 60
           MHTVNSIEIAQSSVPLIDFIFGNAFVYGSKILVKSPLVLSSKIAPSLLTLSSTPFAILCR
Sbjct: 1   MHTVNSIEIAQSSVPLIDFIFGNAFVYGSKILVKSPLVLSSKIAPSLLTLSSTPFAILCR 60

Query: 61  VKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSDT 120
           VKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSDT
Sbjct: 61  VKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSDT 120

Query: 121 VLAHLWATARTF 132
           VLAHLWATARTF
Sbjct: 121 VLAHLWATARTF 132

[Close]

BLAST of Csor.00g251870 vs. NCBI nr
Match: XP_008246109.1 (PREDICTED: probable acyl-CoA dehydrogenase IBR3 [Prunus mume])

HSP 1 Score: 122 bits (305), Expect = 1.04e-31
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR++LE TRLLVLEAADQLDRLGNKKAR T+AMA++  PNMAL++LDM MQVHGA GLSS
Sbjct: 114 CRIELEKTRLLVLEAADQLDRLGNKKARGTLAMAKVAAPNMALMVLDMAMQVHGAAGLSS 173

Query: 119 DTVLAHLWATART 131
           DT LAHLWATART
Sbjct: 174 DTCLAHLWATART 186

[Close]

BLAST of Csor.00g251870 vs. NCBI nr
Match: MCH97194.1 (acyl-CoA dehydrogenase [Trifolium medium])

HSP 1 Score: 119 bits (298), Expect = 2.26e-31
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CRV+LE TRLLVLEAADQLDR GNKKAR  IAMA++  PNMAL +LDM MQVHGA GLSS
Sbjct: 52  CRVELEKTRLLVLEAADQLDRYGNKKARGIIAMAKVAAPNMALQVLDMAMQVHGAAGLSS 111

Query: 119 DTVLAHLWATART 131
           DTVLAHLWATART
Sbjct: 112 DTVLAHLWATART 124

[Close]

BLAST of Csor.00g251870 vs. NCBI nr
Match: PKI65057.1 (hypothetical protein CRG98_014526 [Punica granatum])

HSP 1 Score: 121 bits (304), Expect = 2.44e-31
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR++LE TRLL+LEAADQLDRLGNKKAR TIAMA++  PNMAL +LDM MQVHGA GLSS
Sbjct: 133 CRIELERTRLLILEAADQLDRLGNKKARGTIAMAKVAAPNMALQVLDMAMQVHGAAGLSS 192

Query: 119 DTVLAHLWATART 131
           DTVL+HLWATART
Sbjct: 193 DTVLSHLWATART 205

[Close]

BLAST of Csor.00g251870 vs. NCBI nr
Match: XP_024027060.1 (probable acyl-CoA dehydrogenase IBR3 [Morus notabilis])

HSP 1 Score: 116 bits (290), Expect = 2.53e-30
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR++LE  RLLVLEAADQLDRLGNK+AR TIAMA++  PNMAL +LD  MQVHGA GLSS
Sbjct: 41  CRIELEKARLLVLEAADQLDRLGNKRARGTIAMAKVAAPNMALKVLDRAMQVHGAAGLSS 100

Query: 119 DTVLAHLWATART 131
           DT LAHLWATART
Sbjct: 101 DTALAHLWATART 113

[Close]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL
Match: A0A392NF66 (Acyl-CoA dehydrogenase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0018187 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 1.10e-31
Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CRV+LE TRLLVLEAADQLDR GNKKAR  IAMA++  PNMAL +LDM MQVHGA GLSS
Sbjct: 52  CRVELEKTRLLVLEAADQLDRYGNKKARGIIAMAKVAAPNMALQVLDMAMQVHGAAGLSS 111

Query: 119 DTVLAHLWATART 131
           DTVLAHLWATART
Sbjct: 112 DTVLAHLWATART 124

[Close]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL
Match: A0A2I0K932 (Acyl-CoA_dh_1 domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_014526 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 1.18e-31
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR++LE TRLL+LEAADQLDRLGNKKAR TIAMA++  PNMAL +LDM MQVHGA GLSS
Sbjct: 133 CRIELERTRLLILEAADQLDRLGNKKARGTIAMAKVAAPNMALQVLDMAMQVHGAAGLSS 192

Query: 119 DTVLAHLWATART 131
           DTVL+HLWATART
Sbjct: 193 DTVLSHLWATART 205

[Close]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL
Match: A0A2N9GZ13 (Acyl-CoA_dh_1 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35388 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 1.01e-30
Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CR++LE  RLLVLEAADQLDRLGNKKAR TIAMA++  PNMAL +LD  MQVHGA GLSS
Sbjct: 123 CRIELEKARLLVLEAADQLDRLGNKKARGTIAMAKVAAPNMALKVLDTAMQVHGAAGLSS 182

Query: 119 DTVLAHLWATART 131
           DTVLAHLWATART
Sbjct: 183 DTVLAHLWATART 195

[Close]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL
Match: A0A6J1C8N7 (probable acyl-CoA dehydrogenase IBR3 OS=Momordica charantia OX=3673 GN=LOC111009226 PE=3 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.28e-30
Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CRV+LE TRLLVLEAADQLDRLGNKKAR TIAMA++  PNMAL +LDM MQVHGAGGLSS
Sbjct: 733 CRVELEKTRLLVLEAADQLDRLGNKKARGTIAMAKVAAPNMALQVLDMAMQVHGAGGLSS 792

Query: 119 DTVLAHLWATART 131
           DTVL+HLWATART
Sbjct: 793 DTVLSHLWATART 805

[Close]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL
Match: A0A6J1IX24 (probable acyl-CoA dehydrogenase IBR3 OS=Cucurbita maxima OX=3661 GN=LOC111479342 PE=3 SV=1)

HSP 1 Score: 124 bits (312), Expect = 2.29e-30
Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 59  CRVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSS 118
           CRV+LE TRLLVLEAADQLDRLGNKKAR TIAMA++  PNMAL ILDM MQVHGAGGLSS
Sbjct: 736 CRVELERTRLLVLEAADQLDRLGNKKARGTIAMAKVAAPNMALQILDMAMQVHGAGGLSS 795

Query: 119 DTVLAHLWATART 131
           DTVLAHLWAT RT
Sbjct: 796 DTVLAHLWATTRT 808

[Close]

BLAST of Csor.00g251870 vs. TAIR 10
Match: AT3G06810.1 (acyl-CoA dehydrogenase-related )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 60  RVKLEGTRLLVLEAADQLDRLGNKKARETIAMARLQEPNMALLILDMPMQVHGAGGLSSD 119
           RV+LEGTRLLVLEAAD LD+ GNKKAR  +AMA++  PNMAL +LD  +QVHGA G+SSD
Sbjct: 727 RVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVSSD 786

Query: 120 TVLAHLWATART 132
           TVLAHLWATART
Sbjct: 787 TVLAHLWATART 798

The following BLAST results are available for this feature:

BLAST of Csor.00g251870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWZ3	4.2e-23	75.00	Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis thaliana OX=3702 GN=IBR3 PE=...	[more]
Q5ZHT1	1.2e-09	42.47	Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus OX=9031 GN=ACAD11 PE=2 ...	[more]
Q6JQN1	1.7e-08	47.89	Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens OX=9606 GN=ACAD10 PE=1 S...	[more]
Q80XL6	1.7e-08	43.06	Acyl-CoA dehydrogenase family member 11 OS=Mus musculus OX=10090 GN=Acad11 PE=1 ...	[more]
Q8K370	2.2e-08	47.89	Acyl-CoA dehydrogenase family member 10 OS=Mus musculus OX=10090 GN=Acad10 PE=1 ...	[more]

BLAST of Csor.00g251870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597548.1	1.12e-83	100.00	putative acyl-CoA dehydrogenase IBR3, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_008246109.1	1.04e-31	80.82	PREDICTED: probable acyl-CoA dehydrogenase IBR3 [Prunus mume]	[more]
MCH97194.1	2.26e-31	82.19	acyl-CoA dehydrogenase [Trifolium medium]	[more]
PKI65057.1	2.44e-31	80.82	hypothetical protein CRG98_014526 [Punica granatum]	[more]
XP_024027060.1	2.53e-30	78.08	probable acyl-CoA dehydrogenase IBR3 [Morus notabilis]	[more]

BLAST of Csor.00g251870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A392NF66	1.10e-31	82.19	Acyl-CoA dehydrogenase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0018187 ...	[more]
A0A2I0K932	1.18e-31	80.82	Acyl-CoA_dh_1 domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_014...	[more]
A0A2N9GZ13	1.01e-30	80.82	Acyl-CoA_dh_1 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS...	[more]
A0A6J1C8N7	2.28e-30	84.93	probable acyl-CoA dehydrogenase IBR3 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1IX24	2.29e-30	86.30	probable acyl-CoA dehydrogenase IBR3 OS=Cucurbita maxima OX=3661 GN=LOC111479342...	[more]

BLAST of Csor.00g251870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06810.1	3.0e-24	75.00	acyl-CoA dehydrogenase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	PFAM	PF00441	Acyl-CoA_dh_1	coord: 59..131 e-value: 1.2E-8 score: 35.4
None	No IPR available	GENE3D	1.20.140.10		coord: 56..132 e-value: 2.8E-12 score: 48.7
None	No IPR available	PANTHER	PTHR48083	MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED	coord: 58..131
None	No IPR available	PANTHER	PTHR48083:SF24	ACYL-COA DEHYDROGENASE IBR3-RELATED	coord: 58..131
IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	SUPERFAMILY	47203	Acyl-CoA dehydrogenase C-terminal domain-like	coord: 60..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g251870.m01	Csor.00g251870.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors