Csor.00g251730 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g251730
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Heparan-alpha-glucosaminide n-acetyltransferase
Location	Csor_Chr06: 10556863 .. 10557147 (+)
RNA-Seq Expression	Csor.00g251730
Synteny	Csor.00g251730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCGAGCGACCCGATTCTAGAGGTTTTGATCCCGCCATCACCATGCCCGCCACCGGCGTCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA

mRNA sequence

ATGAGTTCCGAGCGACCCGATTCTAGAGGTTTTGATCCCGCCATCACCATGCCCGCCACCGGCGTCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA

Coding sequence (CDS)

ATGAGTTCCGAGCGACCCGATTCTAGAGGTTTTGATCCCGCCATCACCATGCCCGCCACCGGCGTCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA

Protein sequence

MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRWTGRRRNPVHGVRLLPSRLSKVSLADNSSPSDSNF

Homology

[Close]

BLAST of Csor.00g251730 vs. NCBI nr
Match: KAG6597562.1 (hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188 bits (477), Expect = 4.99e-60
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRW 60
          MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRW
Sbjct: 1  MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRW 60

Query: 61 TGRRRNPVHGVRLLPSRLSKVSLADNSSPSDSNF 94
          TGRRRNPVHGVRLLPSRLSKVSLADNSSPSDSNF
Sbjct: 61 TGRRRNPVHGVRLLPSRLSKVSLADNSSPSDSNF 94

[Close]

BLAST of Csor.00g251730 vs. NCBI nr
Match: KGN57150.1 (hypothetical protein Csa_011148 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 1.68e-19
Identity = 62/99 (62.63%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 8   SRGFDPAITMPATGVTGNQPTKPEKNPSSKA--------AASSNVGKALAHRAVYGAQKR 67
           S  FDPA T   TG     PTK EKNP+SKA        AAS+NVGKALA RAVYG+Q+R
Sbjct: 12  SSAFDPAAT---TGGI-QPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQR 71

Query: 68  WTGRRR-NPVH---GVRLLPSRLSKVSLAD---NSSPSD 91
            TGRRR N +H     RLLPSRLSKVSLAD   NSSPSD
Sbjct: 72  RTGRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

[Close]

BLAST of Csor.00g251730 vs. NCBI nr
Match: KAA0049530.1 (hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK16208.1 hypothetical protein E5676_scaffold209G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 4.40e-16
Identity = 58/96 (60.42%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 8   SRGFDPAITMPATGVTGNQPTKPEKNPSSKAA-----ASSNVGKALAHRAVYGAQKRWTG 67
           S  FDPA T   TG  G QP   EKNP+SKAA     AS+N+GKALA RAVYG Q+R TG
Sbjct: 12  SSAFDPAST---TG--GIQPA--EKNPNSKAATAATAASNNMGKALAERAVYGTQQRRTG 71

Query: 68  RRR-NPVH---GVRLLPSRLSKVSLAD---NSSPSD 91
           RRR N +H    +RLLPS LS+VSLAD   NS PSD
Sbjct: 72  RRRRNLIHEHGAIRLLPSTLSRVSLADHHYNSPPSD 100

[Close]

BLAST of Csor.00g251730 vs. NCBI nr
Match: KAG2726969.1 (hypothetical protein I3760_01G138000 [Carya illinoinensis])

HSP 1 Score: 70.1 bits (170), Expect = 2.20e-13
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 1  MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRW 60
          M+SE+ ++ G D    + A   + NQ T  +K P +K AA+SN+GKALA RA+YG+  R 
Sbjct: 1  MASEKANANGSD----LDAR-TSSNQATTIDKKPDTKGAANSNLGKALAQRALYGSHNRR 60

Query: 61 TGRRRNPVHGVRLLPSRLSKVSLADNS 87
           G R+    G RLLPSRLSKVSL ++S
Sbjct: 61 VGGRKITNSGARLLPSRLSKVSLGEDS 82

[Close]

BLAST of Csor.00g251730 vs. NCBI nr
Match: KAG6668024.1 (hypothetical protein CIPAW_01G142300 [Carya illinoinensis])

HSP 1 Score: 68.6 bits (166), Expect = 8.89e-13
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 1  MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRW 60
          M+SE+ ++ G D    + A   + NQ T  +K P +K  A+SN+GKALA RA+YG+  R 
Sbjct: 1  MASEKANANGSD----LDAR-TSSNQATTIDKKPDTKGTANSNLGKALAQRALYGSHNRR 60

Query: 61 TGRRRNPVHGVRLLPSRLSKVSLADNS 87
           G R+    G RLLPSRLSKVSL ++S
Sbjct: 61 VGGRKVTNSGARLLPSRLSKVSLGEDS 82

[Close]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL
Match: A0A0A0L5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.12e-20
Identity = 62/99 (62.63%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 8   SRGFDPAITMPATGVTGNQPTKPEKNPSSKA--------AASSNVGKALAHRAVYGAQKR 67
           S  FDPA T   TG     PTK EKNP+SKA        AAS+NVGKALA RAVYG+Q+R
Sbjct: 12  SSAFDPAAT---TGGI-QPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQR 71

Query: 68  WTGRRR-NPVH---GVRLLPSRLSKVSLAD---NSSPSD 91
            TGRRR N +H     RLLPSRLSKVSLAD   NSSPSD
Sbjct: 72  RTGRRRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

[Close]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL
Match: A0A5A7U2I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001370 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.13e-16
Identity = 58/96 (60.42%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 8   SRGFDPAITMPATGVTGNQPTKPEKNPSSKAA-----ASSNVGKALAHRAVYGAQKRWTG 67
           S  FDPA T   TG  G QP   EKNP+SKAA     AS+N+GKALA RAVYG Q+R TG
Sbjct: 12  SSAFDPAST---TG--GIQPA--EKNPNSKAATAATAASNNMGKALAERAVYGTQQRRTG 71

Query: 68  RRR-NPVH---GVRLLPSRLSKVSLAD---NSSPSD 91
           RRR N +H    +RLLPS LS+VSLAD   NS PSD
Sbjct: 72  RRRRNLIHEHGAIRLLPSTLSRVSLADHHYNSPPSD 100

[Close]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL
Match: W9QVY7 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007750 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.24e-09
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 22 VTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRWTGRRRNPVHGVRLLPSRLSKV 81
           + NQ    EK P++K   SS++ KALA RA+ G++ R TG RR   +  RLLPSRLSKV
Sbjct: 15 TSSNQVNLQEKKPNTKGTTSSDLEKALAKRALLGSRHRQTGGRRISSNAARLLPSRLSKV 74

Query: 82 SLADNS 87
          SLA+++
Sbjct: 75 SLAEDA 80

[Close]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL
Match: A0A2N9HF98 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38497 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.27e-09
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 31 EKNPSSKAAASSNVGKALAHRAVYGAQKRWTGRRRNPVHGVRLLPSRLSKVSLADNS 87
          E++P+SK + +++ GKALA+RAVYG+  R TG R+   + V+ LPSRLSKVSLA  S
Sbjct: 24 EQSPNSKQSTTTHFGKALAYRAVYGSSSRRTGSRKVTTNDVKSLPSRLSKVSLAKGS 80

[Close]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL
Match: A0A7J7CSF0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G01191 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.50e-09
Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 20 TGVTGNQPTKPEKNPSSKAAASSNVGKALAHRAVYGAQKRWTGRRRNPVHGVRLLPSRLS 79
          T  + NQ    EK P+ K   +++ GKALA RA+YG   R    R+    G R LPSRLS
Sbjct: 13 TSTSSNQEIPAEKEPNRKGITNNSPGKALAQRALYGPHHRRAKGRKVANTGARSLPSRLS 72

Query: 80 KVSLADNSSPSD 91
          KVSLADN  PSD
Sbjct: 73 KVSLADN--PSD 82

The following BLAST results are available for this feature:

BLAST of Csor.00g251730 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g251730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597562.1	4.99e-60	100.00	hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN57150.1	1.68e-19	62.63	hypothetical protein Csa_011148 [Cucumis sativus]	[more]
KAA0049530.1	4.40e-16	60.42	hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK162...	[more]
KAG2726969.1	2.20e-13	48.28	hypothetical protein I3760_01G138000 [Carya illinoinensis]	[more]
KAG6668024.1	8.89e-13	47.13	hypothetical protein CIPAW_01G142300 [Carya illinoinensis]	[more]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5C0	8.12e-20	62.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1	[more]
A0A5A7U2I2	2.13e-16	60.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
W9QVY7	1.24e-09	50.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007750 PE=4 SV=1	[more]
A0A2N9HF98	1.27e-09	54.39	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38497 PE=4 SV=1	[more]
A0A7J7CSF0	2.50e-09	50.00	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G01191 ...	[more]

BLAST of Csor.00g251730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g251730.m01	Csor.00g251730.m01	mRNA