Csor.00g251620 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g251620
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Nucleic acid-binding proteins superfamily isoform 1
Location	Csor_Chr06: 10617294 .. 10621097 (-)
RNA-Seq Expression	Csor.00g251620
Synteny	Csor.00g251620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCTCGGGGTCGACATTTCAAATCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTTCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGTACTGTGAATTCAAACTTCATTAAGGTTAATTATTTCGATTGTAGGGAAACTTTGAGCAATCAAATGAAGAAGTGTTATTAATTGCCTGACTTTCCTATAGTAACTTCAAAGTGAGGACTACCTGAAATGTTGGATGTTACACAATTAGACTAAAGATTCCACGAGTTTAATGGAAGTTCTTGGTTACTAGTTTGAATTTGTAGCAGTAGGCCACCCGAGTTCCTTTTTATTTTATACACCCACTTATTAACAATTCATTCGTAGCGGGGAGAAGAAGAGCCGATGCTCTAAATGAGGGATGAATACTCGATGTTCATGGCTTGCTTCTAGGTTTTTGAAGTCGATCTCTCCTTAAGATTTCTTGATCCAATTGTGGTTCTATTGGTTTTCTGAAGTATTAGGCATCACCATGTGGGCCAACCTCGAGTGATCTAGATTGCACCCTTACCCCACACAGCTTTTTAGTGTCCTCCCAATGTTCCTTTCAATTCAGTATCTCATCAGCTGAAAGGCTATTTCAACAGTCAATTACGCAATTATCCAAGTGAGAAATGTTTGGTTCCGTCCCAAGCTTCATAGTCTAGATTGGAAACAAGAAATCCGCGGGTGATGAAGGCATACGTTTCTTCTCTAGGCGGAAAATGCATTCTGGACTTCTTTTTCCCTCCTGTCAAGTGCCCCTAAATTGTAACTCGTCAGCTTAGGAAGAATACATTTTTTCCAAAGCATAAAAAATTGTTTACACCGATGTAACCTGATTCATGAGGTTTCCTTGTGGTGGGAGTTGGTATAACCCGTGAAATTCTGATAAGAGATGTTACGGAATAAAAGTGGTTTAGTTGAGGTAAAACACGGTGCATAACGTGGCATCTCGGAGAGAGTTAATAAGCTGAATGATTGGTAAAACCAGGCGAAGTTATATATACCCTTGAACAACTACACCTAACCCTTATGTAAGGGGTCAAAGGTTGTGCCTGATTTAGTGGAGAAGACAAAGTACAGTAGTTGATAGATATTGTGCAACGTCAGTAAGTCTGAAAAAGAACAGTGACTAAATGGTTTATATAAACAATGATTGGTTTCACTTCTGATGTTCCACTTCTTGTTACCAACTAAGATGATATAAATTAACCTTTCACAGTTCTATTCTACAAGACAGTTATTTGGGTAGTGATTTTTGTTTTGAAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCAAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTATTTCTATCTCCCATTTTAAGCTGATGATTGTAATTTTAGCAATGTTCTTGTTGCTCTTCCAAATCAATTATACATGACTAAAAAGCTAATATATTTGTAGCTTGAGGAAAGGGTTTCTGAAATTGAAACACATATTCATAGTACTAGTTAATTTACTCAATAAGATATATATATATATATATATTTCTTTGGGACGACCTTCATTTGTTTGTTTGTTTTTTTTTTTAATTTTTTTGGAACTACTTAAGTTCAGGTGTTGTTTCCCTAGTTCGACTGTTTAGATGTCATTACACAAACAAGAATCTGAATCTTTTATCAACATGATTTTCTTAAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGGTAATACTGCTACCCTTCAGATCTATTTATCATGCAATAAAAACCATTTGGAATGAATGTATTCTGAATGGCCATTTGTTTGCTTAATTAGAAGATCCTTTCAGTGGTATTACTGCACTGCACTCTTTTTGTGCCACATTAATTTGAATAAACCAGCTTGCATTTGAAAAATGAACACAAAAAATCCATCAAAGAAAAATGAAGGCCAGCTAAAAGTGAGGAACACAAGAAAATGTTTATTAAAGAGAACCCTCAGCTGCTGTTGATAAAAAAGGGTAATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAGAAAACTGCAGTATGAACCGAAAAAAAAAAAAAAAAAAAACGTTAACATGCACAAAACCCCACATCTCCTCCTACAAGTTATCTAACCCCATGAAAGTTATTGGTTTCTTTCCACCCAAATATGCCATAAATGATGTACAAAATTAGCTTGCCATGGCAAATTACCTTTCTCCTTGAACAAAGAATTCAAAATGACCTCATTGTCCATTGAATGCCTGACCTCTAAATAACAAAAATATCAGATGTCTGCCACATACAACCCACAACTCGAAAGCAGGTGGGTATAGTCACAGTAAGTGATTAAGATCTTTTGCATTGCACTTGTAACCGACACACCAATTCAAACCAAGGACAAGAGGGGAGGCTTTCATGCTGAGGTATAAGATGTTGTTTCTCTCCTGAGCCACAAACCAATAATTTATCTTTTTCTTTTTTTGGAATTCTTAGCTTCCACAGTTTAGAGAAATAGAAAGCACAGAAGGAGATGAAACCAACTGAATGTACCAAGACAAGCTATTGCAGACACTTGAAGGATCAGTAGACCAATAGACCACACTCATGAATTGGTACATTTGAATAGAAATTGATTGATTGGATCAAAGAAAGGGGAGAGACTAACTCGTCTATTGGTACATTTGAAGGATCAATAGACCACACTCAACAATTGGTACATTGAATAAAGATTGATTGATTGGTTTGAATAGTAAGTTTTCTAGAACTCAAGGATACAGTTGTACAACTCATAGAACAAATCCTTATTTAACTAAGGTTGTGAATCCAATGATACAGTTACTGGATATGGATGCTTGATTTTGTATTGCATATTGACATTAAAGCATGCCCGAATCACTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTTTATCTGTAAATATCGACTTCCATTTCCATATTTTCATCTTGATTTGAGGTTTTGTTACGACTCTACAACTGCACAGAACTTGCTATCTTCATATTTCATGGAAGAACAAGTAAAACATGAATCTTTGATGGCAGATTCTATGACTTAGTGGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCTGGTCATCCACGACTTCTACCAACTGAATACCTTATCACATTGTTAGATGAGGTTGTTAAAATGGTTTTTCTAGCTACCAAAATCAATATTATATATATATATTTTGTGCATATGCACAGTGACTATCTTCTATTTATTGTAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGATGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCTAG

mRNA sequence

ATGTCTTCTTCTCGGGGTCGACATTTCAAATCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTTCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCAAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGATTCTATGACTTAGTGGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCTGGTCATCCACGACTTCTACCAACTGAATACCTTATCACATTGTTAGATGAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGATGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCTAG

Coding sequence (CDS)

ATGTCTTCTTCTCGGGGTCGACATTTCAAATCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTTCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCAAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGATTCTATGACTTAGTGGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCTGGTCATCCACGACTTCTACCAACTGAATACCTTATCACATTGTTAGATGAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGATGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCTAG

Protein sequence

MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVILLGAQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFL

Homology

[Close]

BLAST of Csor.00g251620 vs. NCBI nr
Match: KAG6597573.1 (hypothetical protein SDJN03_10753, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 549 bits (1415), Expect = 4.47e-197
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFL 276
           LGAQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFL
Sbjct: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFL 276

[Close]

BLAST of Csor.00g251620 vs. NCBI nr
Match: KAG7029015.1 (hypothetical protein SDJN02_10198 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 536 bits (1381), Expect = 7.22e-186
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAVNKGTTYSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. NCBI nr
Match: XP_022938337.1 (uncharacterized protein LOC111444466 [Cucurbita moschata])

HSP 1 Score: 532 bits (1370), Expect = 3.35e-184
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLI LLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAVNKGT YSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVNKGTAYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. NCBI nr
Match: XP_023538883.1 (uncharacterized protein LOC111799677 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532 bits (1370), Expect = 3.35e-184
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSRGRHF SDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLI LLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAVNKGTTYSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. NCBI nr
Match: XP_022972298.1 (uncharacterized protein LOC111470879 isoform X1 [Cucurbita maxima] >XP_022972299.1 uncharacterized protein LOC111470879 isoform X2 [Cucurbita maxima] >XP_022972300.1 uncharacterized protein LOC111470879 isoform X3 [Cucurbita maxima])

HSP 1 Score: 520 bits (1338), Expect = 2.35e-179
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSR R+FKS EAGG SAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRDRYFKSYEAGGKSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGT+TYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTKTYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLI LLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAV+KGTTYSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVDKGTTYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL
Match: A0A6J1FDS0 (uncharacterized protein LOC111444466 OS=Cucurbita moschata OX=3662 GN=LOC111444466 PE=4 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 1.62e-184
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLI LLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAVNKGT YSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVNKGTAYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL
Match: A0A6J1IB36 (uncharacterized protein LOC111470879 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470879 PE=4 SV=1)

HSP 1 Score: 520 bits (1338), Expect = 1.14e-179
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MSSSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60
           MSSSR R+FKS EAGG SAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV
Sbjct: 1   MSSSRDRYFKSYEAGGKSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNV 60

Query: 61  KGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120
           KGT+TYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL
Sbjct: 61  KGTKTYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQL 120

Query: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180
           KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID
Sbjct: 121 KKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTID 180

Query: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVIL 240
           LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLI LLDEEEDDDVIL
Sbjct: 181 LYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVIL 240

Query: 241 LGAQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           LGAQFCSDSFSSVSLDAV+KGTTYSLYAR
Sbjct: 241 LGAQFCSDSFSSVSLDAVDKGTTYSLYAR 269

[Close]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL
Match: A0A1S3AX73 (uncharacterized protein LOC103483891 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483891 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 2.77e-162
Identity = 237/267 (88.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 3   SSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HF S +AG  SAMEL+D R+LQEE DDDPFLKF+DYARSVLAFED+EDFDPNV G
Sbjct: 2   SSLSKHFNSHDAGRYSAMELDDPRKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNVNG 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYL+ LLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLVILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           AQFCSD+FSSVSLD+VN+GTTYSLYAR
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR 268

[Close]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL
Match: A0A1S4DSK5 (uncharacterized protein LOC103483891 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483891 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 3.23e-162
Identity = 237/267 (88.76%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 3   SSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HF S +AG  SAMEL+D R+LQEE DDDPFLKF+DYARSVLAFED+EDFDPNV G
Sbjct: 2   SSLSKHFNSHDAGRYSAMELDDPRKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNVNG 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYL+ LLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLVILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           AQFCSD+FSSVSLD+VN+GTTYSLYAR
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR 268

[Close]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL
Match: A0A5A7U7H0 (Nucleic acid-binding proteins superfamily isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G008000 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 5.56e-162
Identity = 236/267 (88.39%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 3   SSRGRHFKSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HF S +AG  SAMEL+D R+LQEE DDDPFLKF+DYARSVLAFED+EDFDPNV G
Sbjct: 2   SSLSKHFNSHDAGRYSAMELDDPRKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNVNG 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFLS+SSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLSISSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYL+ LLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLVILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYAR 269
           AQFCSD+FSSVSLD+VN+GTTYSLYAR
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR 268

[Close]

BLAST of Csor.00g251620 vs. TAIR 10
Match: AT3G17030.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 325.5 bits (833), Expect = 4.2e-89
Identity = 168/266 (63.16%), Postives = 204/266 (76.69%), Query Frame = 0


Query: 13  EAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEED------FDPNVKGTETY 72
           +  G S +E+ D     +EE +DPFL F+DYAR+V++ ED+ED        P    TE  
Sbjct: 3   DTNGASLIEIGD-----QEEVEDPFLAFLDYARTVISPEDDEDEKEESKRGPGEAMTEAS 62

Query: 73  TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRR 132
            PGW W+ASR+L+TC AYSS VT AILLS+LSQAW EQ++ G  KK PE I+QLKK +RR
Sbjct: 63  GPGWGWVASRILKTCTAYSSGVTAAILLSDLSQAWHEQNKPGMSKKKPELIDQLKKGHRR 122

Query: 133 KKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCR 192
           ++L  TVTIDSIYEKNFLS++SVLEAVI+   +LPGTNI MLTLGDFWSSNTIDLYLH R
Sbjct: 123 RRLANTVTIDSIYEKNFLSMNSVLEAVIINADVLPGTNIFMLTLGDFWSSNTIDLYLHRR 182

Query: 193 FYDLV---GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLITLLDEEEDDDVILLGA 252
           +Y+LV    GIL+KGR++ +TGCYLR A  G G PRLLPTEYL+ LLDE++DDD IL+ A
Sbjct: 183 YYELVETPNGILRKGREVLITGCYLRTAREGFGTPRLLPTEYLVVLLDEDQDDDAILIAA 242

Query: 253 QFCSDSFSSVSLDAVNKGTTYSLYAR 270
           QFCSD+FSSVSLDA N G +YSLYAR
Sbjct: 243 QFCSDTFSSVSLDAFNDGASYSLYAR 263

The following BLAST results are available for this feature:

BLAST of Csor.00g251620 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g251620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597573.1	4.47e-197	100.00	hypothetical protein SDJN03_10753, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029015.1	7.22e-186	100.00	hypothetical protein SDJN02_10198 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938337.1	3.35e-184	99.26	uncharacterized protein LOC111444466 [Cucurbita moschata]	[more]
XP_023538883.1	3.35e-184	99.26	uncharacterized protein LOC111799677 [Cucurbita pepo subsp. pepo]	[more]
XP_022972298.1	2.35e-179	97.40	uncharacterized protein LOC111470879 isoform X1 [Cucurbita maxima] >XP_022972299...	[more]

BLAST of Csor.00g251620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDS0	1.62e-184	99.26	uncharacterized protein LOC111444466 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]
A0A6J1IB36	1.14e-179	97.40	uncharacterized protein LOC111470879 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3AX73	2.77e-162	88.76	uncharacterized protein LOC103483891 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DSK5	3.23e-162	88.76	uncharacterized protein LOC103483891 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U7H0	5.56e-162	88.39	Nucleic acid-binding proteins superfamily isoform 1 OS=Cucumis melo var. makuwa ...	[more]

BLAST of Csor.00g251620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17030.1	4.2e-89	63.16	Nucleic acid-binding proteins superfamily	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035200	Cell division control protein 24, OB domain 2	PFAM	PF17245	CDC24_OB2	coord: 169..269 e-value: 6.5E-29 score: 101.2
IPR035201	Cell division control protein 24, OB domain 1	PFAM	PF17246	CDC24_OB1	coord: 37..164 e-value: 2.3E-45 score: 153.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR36033	NUCLEIC ACID-BINDING PROTEINS SUPERFAMILY	coord: 36..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g251620.m01	Csor.00g251620.m01	mRNA