Csor.00g251510 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g251510
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	30S ribosomal protein S1
Location	Csor_Chr06: 10704461 .. 10708573 (+)
RNA-Seq Expression	Csor.00g251510
Synteny	Csor.00g251510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATGGCTCAGCAATTCAATGGGCTGCGATGCGCGCCTCTATCTTCATCGCGTCTCTCGAAGCCTTTTTCATCGAGGCATCTGCAGAACAGGGCCCGTTCACTTCCCGTTCAAGCTGCTGTCATTACGAGCCCCATTCCCAGTCCACAGGTGAAGGAGCGTTTCAAGCTCAAGGAGATCTTTGAGGAGGCATATGAACGCTGCCGTAATGCCCCTGTAGAAGGCATCTCCTTCACTGTCGAGGACTTCCATTCCGCTATTGAGAAATACGACTTCAATTCTGAAGTCGGAACTAAGGTTATTTGCGTGTTCTTTTCGTTTTCTCTCTTGTAATTTTGTGTGGAAGGTATGTTCTGGAGTTGATTTTTTTTTTTTTCTCTTTAATTTGATGTTGTGCGATTGCTTGTAGGAATTTGGAACTGTTTTGATAGTGTTGGATTATAGTTCGTTATGTGATTTTGTGTAATTTCTTGTTAATTACACTGGAATTTGGATATTGTGAACTTGAATGGTTTGTTAATTCGATTGTGTTCTGGGAAATGGAAGTGAAAATGCTTATGCGAATTGGAATGTATACTGATAGTGTCATCTTCGGGCATTTGAAGGAGATTGGACCATAATTTATGTAGTTTTCCTCTTCAGGTGAAAGGTACTGTGTTCTGTACGGATGCCAATGGAGCACTCGTTGACATTACTGCCAAGTCTTCTGCATACTTGCCATTGCAGGAGGCTTGCATTCACAGAATAAAACATGTTGAAGAAGCAGGAATATATCCTGGTTTGAGACAGGAGTTTGTCATTATTGGTGAGAACGAAGCTGATGATAGCTTGGTTTTGAGCTTAAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGGTATTTCCATCCAATTTGTGGTTCTTTTGTTCATCTTTTTGTTTGAAGTATCGTTGGTCTAGACGTGTAATAAGAAACTATAAAGTACTATAACATTCCTGGTATCATTAATTTTAAATCACCACTAAACTCAAAAGTTTGAATTGTTGGCTTACTATGAACATAGGACTTCAACTTAGTTTTGATACTATGTTAAATCGCCACTAAACCCAATATTTTAGGCCGATAAATTGCAATAAATTTGATTTTTGTTTGATACTTAACAATTCATATGTAGCCATTCTTTTGTGTTCAATATTCAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTCGTCCCTTTCTCACAAATATCAACGGTATTTTCTATTAGCTATTAATGACTTTCACATTTTGAAAGATTTCCTCGCTTTATGTATATGTAATAGATTATAGTTTCTGTTGGAGCAAAGCATTTAGTTTCTCACAGTTGTTAATTGATGAATGGTTTTATTATTTACAAAGATCATGCTGATTTTCACTCCCTTCCCTTAACAAAGTATTGGATACCAACGATATACTCTTCTATTTTCTTTATGTGAATGCCTTTCCCTTTTGGTGTCAAGGACTATAGTAGTTTCCTTGATTTTAGTTATACACCGGCAATTAACATCATACCTCTTTTTTCATCATGTTCGTGCAATTATTCAGAAATCAACTGCTGAAGAGCTTCTCATGAAAGAGATTCCTCTGAAATTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCGTGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCATTGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATCGACATTGGTGGAGTCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGACCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTAGTTTAATGGCCTTCAAGTGATTTATAAGGCTTCTCACATTCATGTTCCCAAGTCTTACAATGAATTATTCTGGCATAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAATTAGAGCCCACTCCAGGGGACATGATTCGCAATCCAAAGCTTGTCTTTGAAAAGGTATTCTCTTTGCTAGTTATCCTTTTCTTTCATTTTGTACCAATGCTGATTTTTTCGTAATACGTGCACAAGAACGTGGTTGTGGTCTTTCTGCTACATTGTTACCATAATGATAAATATGCAAATTTTCATATGCCGAAGTTCTTGTGCTATGGTGGGGTAGAGGAAACTACTAACTAATGCTAATTTGCCTTCATCCCTGGTAGCATGTACTTCTTTCTTGTTTTCCGCACTTTAAAACCATGATTATATCAGACTTCTCTTATAGATTTTTGGTGGTTATCCCTTGAATGTTGAAAACAAAACCTAGCATCATATGGAGTAATGCTTGTAAAGCTCTATTTTTGTATATTGGATATAAAAGGTAGTAACTATTTTGTAAATAGAGAGATATTAGAGTTCCTGGATCCTCGTGTTTTGTATAGCCTCTTGTAAGAGCGCACTTGATAGGAGTATTTGTAATAGTTTTTGGAGGGGGCCTGTATGAAACCTCCTGTGGCCTCAGTTGGGGTAAAACCTTATCTTCATTTTTTTTTTCCAATTCCGAGTTCATTTCCTATCAAATAGTAGACTGAAAAAGAAGGTAAAAAGATGAAAAATAGCTAGAGGTATATTGTAACTATAATTTTGTTTCTATTTACAGGCTGAGGAGATGGCACAAACTTTCAGGCAAAGAATAGCCTATGCAGAGGCAATGGCACGTGCCGACATGCTTAAGTTTCAGCCTGAGGTACTTCACAGCGATCTATCCTCGAGATTTCTAAACTATACCAAGTTAATGATAAATGCAACTAAATTTTACATGCAGTAGTTCTAAACCATAATGTGGGAAGTTCATCGGTTCCTTTGCCCAAAAAAAAAAAAAAAAAAGAAATCCTTTCTACTTCATTGGGTACTTGAAATGTTGGATGAAAGTCCAATTTTGCACTTGTGGACCGTTAGCAGATATTGTCCTTTTTGGACTTTTCCTTTCGTGTTTTCCCTCAAGGGTTTTAAAACGCGTCTGTTAGGGAGAGATTTTCACACCTTTATAAAGAATGTTTCGTTTTTCTCCTCGATCAAGGGGGATCTCACATTGCAAACTCCCTTTATTAACCAACAACTTGATAAACAATCTACATCAATACTCATTCTTTTTATGTGTCAAATAGAAAGACAATGATGTAGAACTATAGAGTAGAGAAAGGAATGTCATCATTGATTATGAAATGACAATGGGCTGTACACTTTTGGATATTCTTATATTTTTTGGTTGATATCCTATGATTTATGAGGATTTCTATAAGATATTGTTGGATACTCCTATAATTCATAAGTGTATTAAGCATAACTGTTGGACTAGTTAAAAGTATCCTTTATAAGATATTAGAAGTGTTCATAACAATACTTTTTCATTTCCAATGAAGTGCTATTAAGTTCTTTTTCGAAGGTTCTTATGGAAATAGTCCTTCATGCTGTGGATTGTTGGGAGAGGAGTCCCACGTCAGCTAATGAAGGAGTTGATCATGGGTTTATAAATAAGAAATATATCTCCATTGGTATGAGGCCTTTAGAGGAAACCAAAAGTAAAGCCATAAGAGCTTATGCTCAAAGTGGAAGCCATGAGAGCTTATGCTCAAAGTGGAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTAGAGGTCCGTGATTCGTAACACTTCACAAGAAATTAGTGCTCTCTGATGTCATTCAAAATTAAGTACTCACTCATGCTATCAGAAGCCAGCATTGAATTGGTTATTCGGATATCGAATCTTGTTCTCAATCTTCTGTGATCCTTCATTTCTCTTTGCAGCGGACTTTATATCTTTATATCGTTGAATTTGAACCTAAATGGTGACTTGTTTTCTTAACCATACAGAGTGGATTGACCTTGACTACTGATGGAATATTGGGACCAATGACCCCAGAGTTGCCCGTAGAGGGTTTAGATTTGAACGATGTCCCTCCAGCTGAAGAGTGA

mRNA sequence

ATGGCTTCCATGGCTCAGCAATTCAATGGGCTGCGATGCGCGCCTCTATCTTCATCGCGTCTCTCGAAGCCTTTTTCATCGAGGCATCTGCAGAACAGGGCCCGTTCACTTCCCGTTCAAGCTGCTGTCATTACGAGCCCCATTCCCAGTCCACAGGTGAAGGAGCGTTTCAAGCTCAAGGAGATCTTTGAGGAGGCATATGAACGCTGCCGTAATGCCCCTGTAGAAGGCATCTCCTTCACTGTCGAGGACTTCCATTCCGCTATTGAGAAATACGACTTCAATTCTGAAGTCGGAACTAAGGTGAAAGGTACTGTGTTCTGTACGGATGCCAATGGAGCACTCGTTGACATTACTGCCAAGTCTTCTGCATACTTGCCATTGCAGGAGGCTTGCATTCACAGAATAAAACATGTTGAAGAAGCAGGAATATATCCTGGTTTGAGACAGGAGTTTGTCATTATTGGTGAGAACGAAGCTGATGATAGCTTGGTTTTGAGCTTAAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTCGTCCCTTTCTCACAAATATCAACGAAATCAACTGCTGAAGAGCTTCTCATGAAAGAGATTCCTCTGAAATTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCGTGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCATTGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATCGACATTGGTGGAGTCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGACCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAATTAGAGCCCACTCCAGGGGACATGATTCGCAATCCAAAGCTTGTCTTTGAAAAGGCTGAGGAGATGGCACAAACTTTCAGGCAAAGAATAGCCTATGCAGAGGCAATGGCACGTGCCGACATGCTTAAGTTTCAGCCTGAGAGTGGATTGACCTTGACTACTGATGGAATATTGGGACCAATGACCCCAGAGTTGCCCGTAGAGGGTTTAGATTTGAACGATGTCCCTCCAGCTGAAGAGTGA

Coding sequence (CDS)

ATGGCTTCCATGGCTCAGCAATTCAATGGGCTGCGATGCGCGCCTCTATCTTCATCGCGTCTCTCGAAGCCTTTTTCATCGAGGCATCTGCAGAACAGGGCCCGTTCACTTCCCGTTCAAGCTGCTGTCATTACGAGCCCCATTCCCAGTCCACAGGTGAAGGAGCGTTTCAAGCTCAAGGAGATCTTTGAGGAGGCATATGAACGCTGCCGTAATGCCCCTGTAGAAGGCATCTCCTTCACTGTCGAGGACTTCCATTCCGCTATTGAGAAATACGACTTCAATTCTGAAGTCGGAACTAAGGTGAAAGGTACTGTGTTCTGTACGGATGCCAATGGAGCACTCGTTGACATTACTGCCAAGTCTTCTGCATACTTGCCATTGCAGGAGGCTTGCATTCACAGAATAAAACATGTTGAAGAAGCAGGAATATATCCTGGTTTGAGACAGGAGTTTGTCATTATTGGTGAGAACGAAGCTGATGATAGCTTGGTTTTGAGCTTAAGATCCATCCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGATGTTGTTGTCAAGGGTAAGGTGGTTGATGCAAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTCGTCCCTTTCTCACAAATATCAACGAAATCAACTGCTGAAGAGCTTCTCATGAAAGAGATTCCTCTGAAATTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCGTGGCTGACAGCCAGGCACAGCTTGGAATTGGATCAGTGGTCATTGGGACAGTTCAAAGCCTTAAACCTTATGGTGCATTCATCGACATTGGTGGAGTCAATGGTCTTCTTCATGTCAGTCAAATCAGTCATGACCGGATATCAGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTCATGATATTGAGCCATGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAATTAGAGCCCACTCCAGGGGACATGATTCGCAATCCAAAGCTTGTCTTTGAAAAGGCTGAGGAGATGGCACAAACTTTCAGGCAAAGAATAGCCTATGCAGAGGCAATGGCACGTGCCGACATGCTTAAGTTTCAGCCTGAGAGTGGATTGACCTTGACTACTGATGGAATATTGGGACCAATGACCCCAGAGTTGCCCGTAGAGGGTTTAGATTTGAACGATGTCCCTCCAGCTGAAGAGTGA

Protein sequence

MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLKEIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITAKSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVDEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE

Homology

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BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 1.4e-189
Identity = 341/414 (82.37%), Postives = 382/414 (92.27%), Query Frame = 0


Query: 1   MASMAQQF-NGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKL 60
           MAS+AQQ   GLRC PLS+S LSKPFS +H   + R  P+ +AV  S   + Q +ER KL
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTL-KPRFSPIVSAVAVS---NAQTRERQKL 60

Query: 61  KEIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDIT 120
           K++FE+AYERCRNAP+EG+SFT++DFH+A++KYDFNSE+G++VKGTVFCTDANGALVDIT
Sbjct: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120

Query: 121 AKSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWER 180
           AKSSAYLPL EACI+RIK+VEEAGI PG+R+EFVIIGENEADDSL+LSLR IQY+LAWER
Sbjct: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEV 240
           CRQLQAEDVVVKGK+V ANKGGVVA+VEGLRGFVPFSQIS+KS+AEELL KEIPLKFVEV
Sbjct: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDR 300
           DEEQSRLV+SNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDR
Sbjct: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 ISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           +SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 414
           RQRIA AEAMARADML+FQPESGLTL++DGILGP+T +LP EGLDL+ VPPA E
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVE 410

[Close]

BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 2.9e-179
Identity = 327/416 (78.61%), Postives = 378/416 (90.87%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPL-SSSRLSKPFSSRHLQNRARSL--PVQAAVITSPIPSPQVKERF 60
           MAS+AQQF+GLRC+PL SSSRLS+  S    QN++ S+   + AAV  S   S Q KER 
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMS---SGQTKERL 60

Query: 61  KLKEIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVD 120
           +LK++FE+AYERCR +P+EG++FTV+DF +AIE+YDFNSE+GT+VKGTVF TDANGALVD
Sbjct: 61  ELKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVD 120

Query: 121 ITAKSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAW 180
           I+AKSSAYL +++ACIHRIKHVEEAGI PG+ +EFVIIGENE+DDSL+LSLR+IQY+LAW
Sbjct: 121 ISAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAW 180

Query: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFV 240
           ERCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KEIPLKFV
Sbjct: 181 ERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFV 240

Query: 241 EVDEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISH 300
           EVDEEQ++LVLSNRKAVADSQAQLGIGSVV+G VQSLKPYGAFIDIGG+NGLLHVSQISH
Sbjct: 241 EVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 301 DRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360
           DR+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 361 TFRQRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDL--NDVPPA 412
           TFRQRIA AEAMARADML+FQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 299.7 bits (766), Expect = 5.2e-80
Identity = 149/294 (50.68%), Postives = 213/294 (72.45%), Query Frame = 0


Query: 71  RNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITAKSSAYLPLQE 130
           ++ P   I FT EDF + +++YD++   G  V GTVF  +  GAL+DI AK++A+LP+QE
Sbjct: 4   QDIPAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQE 63

Query: 131 ACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVV 190
             I+R++  EE  + P   +EF I+ +   D  L LS+R I+Y  AWER RQLQ ED  V
Sbjct: 64  MSINRVESPEEV-LQPSEMREFFILSDENEDGQLTLSIRRIEYMRAWERVRQLQTEDATV 123

Query: 191 KGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVDEEQSRLVLSN 250
           + +V   N+GG +  +EGLRGF+P S IST+   E+L+ +E+PLKF+EVDE+++RLVLS+
Sbjct: 124 RSEVFATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSH 183

Query: 251 RKAVADSQA-QLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRISDIATVLQP 310
           R+A+ + +  +L +G VV+G V+ +KPYGAFIDIGGV+GLLH+S+ISHD I    +V   
Sbjct: 184 RRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNV 243

Query: 311 GDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 364
            D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++
Sbjct: 244 NDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKL 296

[Close]

BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot
Match: P73530 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1A PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-76
Identity = 150/312 (48.08%), Postives = 215/312 (68.91%), Query Frame = 0


Query: 78  ISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITAKSSAYLPLQEACIHRIK 137
           I FT+EDF + ++KYD++   G  V GTVF  ++ GAL+DI AK++AY+P+QE  I+R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 138 HVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDA 197
             EE  + P   +EF I+ +   D  L LS+R I+Y  AWER RQLQAED  V+  V   
Sbjct: 70  DPEEV-LQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFAT 129

Query: 198 NKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVDEEQSRLVLSNRKAVADS 257
           N+GG +  +EGLRGF+P S IS +   E+L+ +++PLKF+EVDEE++RLVLS+R+A+ + 
Sbjct: 130 NRGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVER 189

Query: 258 QAQ-LGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRISDIATVLQPGDTLKVM 317
           +   L +  VV+G+V+ +KPYGAFIDIGGV+GLLH+S+ISHD I    +V    D +KVM
Sbjct: 190 KMNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 249

Query: 318 ILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAYAEAMARADMLK 377
           I+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ+      +A A  + 
Sbjct: 250 IIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQK-----RLAEAQGIP 309

Query: 378 FQPESGLTLTTD 389
           ++P + +  T D
Sbjct: 310 YEPPTSVDDTDD 315

[Close]

BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot
Match: O33698 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsA PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-44
Identity = 97/282 (34.40%), Postives = 166/282 (58.87%), Query Frame = 0


Query: 83  EDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITAKSSAYLPLQEACIHRIKHVEEA 142
           +DF  A+E    +S+ G  V+G V     +GA +DI  K+ A+LP +EA +H +  + EA
Sbjct: 12  DDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL-EA 71

Query: 143 GIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGV 202
            +      EF++I +   D  + +SLR++  + AW R  +LQ     V+ KV  +NKGGV
Sbjct: 72  HLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGV 131

Query: 203 VAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVDEEQSRLVLSNRKAVADSQA-QL 262
            A +EGLR F+P S ++ K   + L  K + + F+EV+    +LVLS R+A   +   ++
Sbjct: 132 TADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREI 191

Query: 263 GIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRISDIATVLQPGDTLKVMILSHD 322
            +G ++ G V  LKP+G F+D+GG   LL ++QIS   ++D+  + + GD ++ ++++ D
Sbjct: 192 EVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAID 251

Query: 323 RERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 364
             +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 252 NTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]

BLAST of Csor.00g251510 vs. NCBI nr
Match: XP_022935757.1 (30S ribosomal protein S1, chloroplastic-like [Cucurbita moschata] >KAG6597584.1 30S ribosomal protein S1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 799 bits (2064), Expect = 2.27e-291
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. NCBI nr
Match: KAG7029028.1 (30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 799 bits (2064), Expect = 5.62e-291
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. NCBI nr
Match: XP_023540263.1 (30S ribosomal protein S1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 796 bits (2056), Expect = 3.76e-290
Identity = 410/413 (99.27%), Postives = 412/413 (99.76%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFS+RHLQNRARSLPVQAAVITSPIPSPQVKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSTRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTD NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDGNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAG+YPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGVYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. NCBI nr
Match: XP_022972194.1 (30S ribosomal protein S1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 795 bits (2054), Expect = 7.58e-290
Identity = 411/413 (99.52%), Postives = 412/413 (99.76%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSP VKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPLVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTD+NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDSNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. NCBI nr
Match: XP_022138241.1 (30S ribosomal protein S1, chloroplastic [Momordica charantia])

HSP 1 Score: 758 bits (1956), Expect = 6.52e-275
Identity = 385/413 (93.22%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQF GLRCAPLSSSRLS PFS RHLQN+ARSLPV AAVI+SPIPSPQ KERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           E+FE+AYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTDANGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAGI+PG+R+EFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KSTAEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIA AEAMARADML+FQPESGLTLTTDGILGP+TPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL
Match: A0A6J1F6H4 (30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442576 PE=4 SV=1)

HSP 1 Score: 799 bits (2064), Expect = 1.10e-291
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL
Match: A0A6J1IAT2 (30S ribosomal protein S1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470801 PE=4 SV=1)

HSP 1 Score: 795 bits (2054), Expect = 3.67e-290
Identity = 411/413 (99.52%), Postives = 412/413 (99.76%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSP VKERFKLK
Sbjct: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPLVKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTD+NGALVDITA
Sbjct: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDSNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL
Match: A0A6J1C966 (30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009464 PE=4 SV=1)

HSP 1 Score: 758 bits (1956), Expect = 3.16e-275
Identity = 385/413 (93.22%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQF GLRCAPLSSSRLS PFS RHLQN+ARSLPV AAVI+SPIPSPQ KERFKLK
Sbjct: 1   MASMAQQFTGLRCAPLSSSRLSTPFSPRHLQNKARSLPVHAAVISSPIPSPQTKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           E+FE+AYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTDANGALVDITA
Sbjct: 61  EVFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVKGTVFCTDANGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLP+QEACIHRIKHVEEAGI+PG+R+EFVIIGENEADDSLVLSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPVQEACIHRIKHVEEAGIFPGVREEFVIIGENEADDSLVLSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQIS+KSTAEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISSKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIA AEAMARADML+FQPESGLTLTTDGILGP+TPELPVEGLDL+DVPPAEE
Sbjct: 361 QRIAQAEAMARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLSDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL
Match: A0A1S3AXL6 (30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 PE=4 SV=1)

HSP 1 Score: 758 bits (1956), Expect = 3.16e-275
Identity = 384/413 (92.98%), Postives = 404/413 (97.82%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQF GLRC PLSSSRLSKPFSS+HL N++RSLPVQAAVI+ PIPSPQ KERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVDITA 120
           E+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKVKGTVFCTD NGALVDITA
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITA 120

Query: 121 KSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAWERC 180
           KSSAYLPLQEACIHRIKHVEEAGI+PGLR+EFVIIGENE+DDSL+LSLRSIQYDLAWERC
Sbjct: 121 KSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180

Query: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFVEVD 240
           RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELL KE+PLKFVEVD
Sbjct: 181 RQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVD 240

Query: 241 EEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISHDRI 300
           EEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQISHDRI
Sbjct: 241 EEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRI 300

Query: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360
           SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR
Sbjct: 301 SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFR 360

Query: 361 QRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDLNDVPPAEE 413
           QRIA AEA+ARADML+FQPESGLTLTTDGILGP+TPELPVEGLDLNDVPPAEE
Sbjct: 361 QRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLNDVPPAEE 413

[Close]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL
Match: A0A5A7UEP7 (30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00520 PE=4 SV=1)

HSP 1 Score: 744 bits (1920), Expect = 2.46e-269
Identity = 384/438 (87.67%), Postives = 404/438 (92.24%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPLSSSRLSKPFSSRHLQNRARSLPVQAAVITSPIPSPQVKERFKLK 60
           MASMAQQF GLRC PLSSSRLSKPFSS+HL N++RSLPVQAAVI+ PIPSPQ KERFKLK
Sbjct: 1   MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAAVISGPIPSPQTKERFKLK 60

Query: 61  EIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKV------------------ 120
           E+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GTKV                  
Sbjct: 61  EVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVISGFSFFFFFFFQFCIFV 120

Query: 121 -------KGTVFCTDANGALVDITAKSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVII 180
                  KGTVFCTD NGALVDITAKSSAYLPLQEACIHRIKHVEEAGI+PGLR+EFVII
Sbjct: 121 GAVSFQVKGTVFCTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGIFPGLREEFVII 180

Query: 181 GENEADDSLVLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240
           GENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF
Sbjct: 181 GENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPF 240

Query: 241 SQISTKSTAEELLMKEIPLKFVEVDEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLK 300
           SQISTKSTAEELL KE+PLKFVEVDEEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLK
Sbjct: 241 SQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK 300

Query: 301 PYGAFIDIGGVNGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360
           PYGAFIDIGG+NGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE
Sbjct: 301 PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLE 360

Query: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAYAEAMARADMLKFQPESGLTLTTDGILGPMT 413
           PTPGDMIRNPKLVFEKAEEMAQTFRQRIA AEA+ARADML+FQPESGLTLTTDGILGP+T
Sbjct: 361 PTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPIT 420

[Close]

BLAST of Csor.00g251510 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 629.4 bits (1622), Expect = 2.0e-180
Identity = 327/416 (78.61%), Postives = 378/416 (90.87%), Query Frame = 0


Query: 1   MASMAQQFNGLRCAPL-SSSRLSKPFSSRHLQNRARSL--PVQAAVITSPIPSPQVKERF 60
           MAS+AQQF+GLRC+PL SSSRLS+  S    QN++ S+   + AAV  S   S Q KER 
Sbjct: 1   MASLAQQFSGLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMS---SGQTKERL 60

Query: 61  KLKEIFEEAYERCRNAPVEGISFTVEDFHSAIEKYDFNSEVGTKVKGTVFCTDANGALVD 120
           +LK++FE+AYERCR +P+EG++FTV+DF +AIE+YDFNSE+GT+VKGTVF TDANGALVD
Sbjct: 61  ELKKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVD 120

Query: 121 ITAKSSAYLPLQEACIHRIKHVEEAGIYPGLRQEFVIIGENEADDSLVLSLRSIQYDLAW 180
           I+AKSSAYL +++ACIHRIKHVEEAGI PG+ +EFVIIGENE+DDSL+LSLR+IQY+LAW
Sbjct: 121 ISAKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAW 180

Query: 181 ERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLMKEIPLKFV 240
           ERCRQLQAEDV+VK KV+ ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KEIPLKFV
Sbjct: 181 ERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFV 240

Query: 241 EVDEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGVNGLLHVSQISH 300
           EVDEEQ++LVLSNRKAVADSQAQLGIGSVV+G VQSLKPYGAFIDIGG+NGLLHVSQISH
Sbjct: 241 EVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 301 DRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360
           DR+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 361 TFRQRIAYAEAMARADMLKFQPESGLTLTTDGILGPMTPELPVEGLDL--NDVPPA 412
           TFRQRIA AEAMARADML+FQPESGLTL++DGILGP+  ELP +G+DL  +D+P A
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSA 413

[Close]

BLAST of Csor.00g251510 vs. TAIR 10
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-22
Identity = 65/205 (31.71%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 165 VLSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVP----FSQIST 224
           +LS R     +AW R RQ++  +  ++ K+ + N GG++  +EGLR F+P      +++T
Sbjct: 261 LLSSRRYFRRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNT 320

Query: 225 KSTAEELLMKEIPLKFVEVDEEQSRLVLSNRKAVADSQAQLGIGSVVIGTVQSLKPYGAF 284
            +  +E + +   ++   ++E+++ L+LS +  VA  +  L  G+++ GTV  + PYGA 
Sbjct: 321 FTELKENVGRRFLVQITRLNEDKNDLILSEK--VAWEKLYLREGTLLEGTVVKILPYGAQ 380

Query: 285 IDIG--GVNGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 344
           + +G    +GLLH+S I+  RI  ++ VLQ  +++KV+++       ++SLS   LE  P
Sbjct: 381 VKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVVK-SLFPDKISLSIADLESEP 440

Query: 345 GDMIRNPKLVFEKAEEMAQTFRQRI 364
           G  I + + VF +AEEMA+ +R+++
Sbjct: 441 GLFISDREKVFTEAEEMAKKYREKM 462

[Close]

BLAST of Csor.00g251510 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 96.3 bits (238), Expect = 6.2e-20
Identity = 57/180 (31.67%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 177 WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEE---------- 236
           W+  +         +G+V   N GG++     L GF+P+ Q+S   + +E          
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 237 -LLMKEIPLKFVEVDEEQSRLVLSNRKAVADSQAQ-LGIGSVVIGTVQSLKPYGAFIDIG 296
            L+  ++P+K V+ DEE  +L+LS + A+    +Q + +G V  G V S++ YGAFI + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 297 ------GVNGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 339
                  + GL+HVS++S D + D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]

BLAST of Csor.00g251510 vs. TAIR 10
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative )

HSP 1 Score: 66.6 bits (161), Expect = 5.3e-11
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 237 VEVDEEQSRLVLSNRKAVADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDI-GGVN 296
           + +D     +V  N+  +  +Q Q        L +G V  GTV S+K YGAF++  GG  
Sbjct: 643 LSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQ 702

Query: 297 GLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 339
           GLLH+S++SH+ +S ++ VL  G  +  M +  D  RG + LS K L P P
Sbjct: 703 GLLHMSELSHEPVSKVSDVLDIGQCITTMCIETD-VRGNIKLSRKALLPKP 752

[Close]

BLAST of Csor.00g251510 vs. TAIR 10
Match: AT3G11964.1 (RNA binding;RNA binding )

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-09
Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 260  QLGIGSVVIGTVQSLKPYGAFIDIG--GVNGLLHVSQISHDRISDIATVLQPGDTLKVMI 319
            +L +G ++ G ++ ++P+G FIDI   G+ GL H+SQ+S DR+ ++    + G++++  I
Sbjct: 1431 KLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGESVRAKI 1490

Query: 320  LSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAYAEAMARADMLKF 379
            L  D E+ R+SL  K      GD  +   L  +               +E +A  D   F
Sbjct: 1491 LKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPIND--PKSEVLAAVDDFGF 1550

Query: 380  QPESGLTLTTDGILGPMTPELPVEGLDLNDV 409
            Q  SG T      +       P+E +DL+D+
Sbjct: 1551 QETSGGTSLVLAQVESRASIPPLE-VDLDDI 1578

The following BLAST results are available for this feature:

BLAST of Csor.00g251510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29344	1.4e-189	82.37	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=...	[more]
Q93VC7	2.9e-179	78.61	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]
P46228	5.2e-80	50.68	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]
P73530	1.2e-76	48.08	30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
O33698	3.5e-44	34.40	30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805...	[more]

BLAST of Csor.00g251510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935757.1	2.27e-291	100.00	30S ribosomal protein S1, chloroplastic-like [Cucurbita moschata] >KAG6597584.1 ...	[more]
KAG7029028.1	5.62e-291	100.00	30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023540263.1	3.76e-290	99.27	30S ribosomal protein S1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972194.1	7.58e-290	99.52	30S ribosomal protein S1, chloroplastic [Cucurbita maxima]	[more]
XP_022138241.1	6.52e-275	93.22	30S ribosomal protein S1, chloroplastic [Momordica charantia]	[more]

BLAST of Csor.00g251510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6H4	1.10e-291	100.00	30S ribosomal protein S1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IAT2	3.67e-290	99.52	30S ribosomal protein S1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A6J1C966	3.16e-275	93.22	30S ribosomal protein S1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3AXL6	3.16e-275	92.98	30S ribosomal protein S1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483907 ...	[more]
A0A5A7UEP7	2.46e-269	87.67	30S ribosomal protein S1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Csor.00g251510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30510.1	2.0e-180	78.61	ribosomal protein S1	[more]
AT1G71720.1	3.9e-22	31.71	Nucleic acid-binding proteins superfamily	[more]
AT3G23700.1	6.2e-20	31.67	Nucleic acid-binding proteins superfamily	[more]
AT5G14580.1	5.3e-11	36.04	polyribonucleotide nucleotidyltransferase, putative	[more]
AT3G11964.1	3.8e-09	28.48	RNA binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 97..169 e-value: 1.0E-6 score: 38.3 coord: 185..251 e-value: 7.5E-7 score: 38.8 coord: 262..332 e-value: 2.0E-25 score: 100.4
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 185..249 e-value: 1.2E-7 score: 32.0 coord: 263..332 e-value: 2.1E-17 score: 63.2
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 187..251 score: 14.328993
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 99..169 score: 12.574102
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 264..332 score: 21.866022
None	No IPR available	GENE3D	2.40.50.140		coord: 258..336 e-value: 9.9E-23 score: 81.9
None	No IPR available	GENE3D	2.40.50.140		coord: 181..257 e-value: 3.3E-7 score: 32.0 coord: 82..180 e-value: 2.4E-9 score: 38.9
None	No IPR available	PANTHER	PTHR10724:SF11	30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC	coord: 1..413
None	No IPR available	PANTHER	PTHR10724	30S RIBOSOMAL PROTEIN S1	coord: 1..413
None	No IPR available	CDD	cd05692	S1_RPS1_repeat_hs4	coord: 264..332 e-value: 5.49319E-31 score: 111.223
None	No IPR available	CDD	cd04465	S1_RPS1_repeat_ec2_hs2	coord: 198..251 e-value: 4.09805E-16 score: 70.5655
None	No IPR available	CDD	cd05687	S1_RPS1_repeat_ec1_hs1	coord: 99..169 e-value: 8.59239E-13 score: 61.0059
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 182..255
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 263..342
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 94..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g251510.m01	Csor.00g251510.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding