Csor.00g251480 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g251480
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DEAD-box ATP-dependent RNA helicase 46
Location	Csor_Chr06: 10721739 .. 10728828 (-)
RNA-Seq Expression	Csor.00g251480
Synteny	Csor.00g251480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGGTCCTTTTCCAAGAGAAAATGGGCCGATAATCCATGGGCCTAACTAAACGCGTCACAATAGGCCCATTGTAAAAACGGGTCGACCCACGTATCATATGTAAGGGGTCCGAGTCAAACCCGTACCCGTAATTCTATACAGAGCTCAAATTTTTACAGCGCTTGATAAGAGCGGTCGTTCCGCTCGCTATTGGACGTTCGAGATTCGAGCGTAAACCACCACAAATGATCCTGGCCCTCCATTTTATCAATCGGTCCTTTCCCGTCGTCTAAATGCTAGACTAGGACACTGGATTTGGTAACACCTCCATCTCCATTAGCCCTAGCGCCTCAAAGTCTCTACGAATCTCTTCCTTGTAGAGCCTTTCCGTTCGTTCGATTGAGCGATTGAACGGGAAAATCTTTTTAGGTTTCCTTTAATTTTACTTCTCTCGTCAGGTCTTGGCGGGGAAGGAGAAAAATAATCGGAGTTCGGATCTTCATCGAGGTATATATAATTTTTTGTTTTGATCACCTTATTTTGCCTTTTATCTTGTTGCATTCTGTTCTTTTTCGTTTGCTAATCATTTGTTTGTTGGTTTTGATTTTTACTTACCCTAAATGCGCATGCTTTCTGTTTCTGTAAAGATCATTGGGAAAAATTTGAAGATTGAAAGAAAGAATTAAGTTTGGAGGTAATTGTTTGATGGCATTATTAGAATGTTAATTTAGTGTATCGCAAATTCTAGGGTTTCAGTATCTTGGAAAACTGGATAAACTTGGTGTTGAAATGGAATTTTGTTCTCAATTTTTGGTCTAACTTTTGCTTATAAGTTTATATGTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTCAGTGGGTAGGAAGGATGCTATCTTTGTTTGTTGAATACTGACTTGTTTGTGATCAATTTCTCCATACCTTTTGAAGTCATGGAAACTGGGGAGTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCGGACGACCCTACTCTTCCCAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTGTTGTACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAAAAACCAGTCTCTTTGCCACCACCATTACCACTCGCTCCTCATCCTAGTGCCTCTACTTCCAAGCCTACTTCAATCCCGGAGGGTCATTCAACGCCATCAAATGGCACACTAACCCCTCATGTACAGCAAAATCATCATGTCCCTCAACAGGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATCTGATGTCACAACAGCACAGTTCTGTTGCAGGTCAGGCAATTGTTAATCACCATCCTAGCATGCAAATGGCACCAGATGGGCGACAACATAGCTTGCAACCGAACCAGGTTTTGCAGCAACAGGGGATGTTTCCGATGTCGTCGCAGCATATTGGCCAGCAGCAGGTCATGCATCAAGGTCAGAAAATGGCACATGCTAATCAACAAATATCTCAGCATCCTAACCAGCAACCCCTGCAGAATCCAGGACAACAAATACCACAGCCCTCAATCCAGCATTTAGGACAGCCAAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCATCCTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTGCAGCAAAATTCCCAGCAGCAAGTTCAACAGAGCCCTTTAGGGCAACCATTTGGTAATCACCTTGAGCAGAAGTCAGCTTTTCAGAAGAGAGAGGAGGATAATATCCAGTCAGGAAACCAAATTGGATTTTCTACTTCCCAGTTTCAACAAAGTGGTGGTACATCATCTATTCATAGTGTTCATCCTGGAACCAATTCTTCTCAAATGCAACAATACGGTTTACCTTCCGATCAAGCACGACAATTTGGTGGTTCTCCAGGAAACATGCAACAGCCGCATCCTGTGGTTCAATTGCAGCATTCGGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCCAATGGGCCCAGCTGCGATGCAGGAGAAGCAAGCCGGTTCTGAAAATTTGCCAGGCAGAGCTGGAAATGAATATTTCTTTGGCAGGAATGAGGGGCCTGGAATTGGTCCACATCAACCAAGGCTTGCAGCAATACCAATGGCAAGGAGCCAGCAGGTTCTTCATTTATCGTCCATTTGTAATTCTTCCACGTTCAAGTTTTTCGTGGACATGTTTAATTAAGATACAAATATGAGGGATGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATGACAGAACCATGGGCACACAGATTTATATTTTTGCATATTTTAAGATTTGTGCATGTTAAAAGAAATTAAATGGGCACTGGTATTTTGGGAAGATGTTATAACATTGAAGAGATGTCGTTAGGTACCATAAAGTTTTATGAAGGAGGTTTATGTGGAATTGGATTATTAAAGGAATCGATAGGATATGATGTGTTATTTTCTCTTTTCCTTGTCCATGTCTTAGATTTAGGTTAAGATAATTTTTTTTCTTTAAATATTATGCAAGAAACAACACTTTCATTGAGAAACATGAAAGAATACATGAGGGCAGGTTAATAGAAATGTTGTATCAATTTACTAAGTATTTCGGTTCTCTATGATATAGTTTTTCATATACGTATGCGTACTATCCTTCTTTCAGGATGCAAGGATGAGTGGTGTCCCATTTCCAAGTGTGGCACCCAGTCATCCCAGTGGAACAAGTTTTGCAGCCGGGCAATCACATAATATGTACAACCATGGGTCTGGTGGTCCATCATTGTCAAACAATGCTTTGATGGGCCCTCCCCATATTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCCACGGTTTGTATTTCAGCATGCCTATATTCTCCAATTATGTGTGTTGTGAATGCTATAGGGCGTTATAATTGTATCCCTGGATACCAATCGTGTAGGCAATATTCTGTGGGAAAATTAGTGTGAAATTGTTGAGCGTATGCAGTTTAATGGAAGTTGAAACATCACCAAATGGAAATAGAATTTGACTGATTTTATTTCATTAGACGTGCTCTGTATTTTCAATTTATAGTAGTTGAACTACTATTCTTTTTGGGCGTAAATAACCAGTTCAATTAACTGTGCAGGGTGATAATGTTCCAGCTCCATTCATGACATTTGAGGCTACTGGCTTCCCTCCGGAGATACTGAGAGAGGCTAGTTTATGCTTGCCCAAACTTCTTTTATTTGGTTTGCGTGAAAAAACAAATCCATGATCCTGTTTACTCCTTTCTTCTGTTATTAATTTAGTTTTTACTCATGAGTTCTCACTTGTCGCAGGTGCGATATCTGCTCCGGAGGAGGAGCATATGTCGTACGCTGCACTGCTATTGCTACACTTGCACATGCAACAACCCCTTGTTTTTTGGAGGCTGCAAAATGGATGGTTGGAGCCTTTCTAGGGAATCTTTTAGTAGAGTGTTGGCCCTTTGACCAAATCACACCTGATGTGACTGAGATGTCTTGCTTATTGGCTCTGCTTAATATGTCTTTATTGCCATCTTTTGTTGCCTCGAGTTGCTTCTGTAAGCAACTAATCTATGGGTTTTTTTGTGCTATTTCATTTTTGCTCCTGTAGAACACTGTATTTTTGTAATGTATTTCAACATGAATGTGTCTGGCATGTTCTAACTTTGGCGCTGAGTCTATATTTCCATCTTTGTGCCTCAGATATATACTGCTGGTTTCTCATCTCCCACGCCAATTCAAGCACAAACATGGCCGATTGCCCTGCAAGGTAGAGACATAGTCGCAATTGCTAAAACAGGGTCTGGGAAAACTTTGGGCTATTTGATTCCTGCTTTCGTTCTTCTAAGGCAGTGCCGAAATAACCCTCAAAATGGACCAACGGTGTTGGTTCTGGCTCCTACTAGGGAGCTTGCCACTCAAATACAAGATGAGGCGATTAAATTTGGGAGGGCTTCCAGGATTTGTTGTACGGTGAGTTTCAAATGTTTACTTTTTTGGGTCCTTGAATCATCTACTTCTGCTTCCCTTTTTTGTGTACTTTCTCCATTTTGTGTTAAAATTCTTCCTTATTTCAGTGCTTGTATGGTGGTGCTCCGAAAGGTCCTCAGCTTAAAGAGTTAGATCGTGGGGCTGATATTGTTGTGGCAACTCCTGGCCGACTTAATGATATACTAGAAATGAAAATGATCAACTTTAGGCAAGTTTCACTTCTTGTGCTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCCCAAATTAGAAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCGACCTGGCCCAAGGAAGTAAGAAAAATAGCAAATGATCTTCTTGTCAATTCTGTCCAGGTGAATATTGGAAGCGTTGATGAACTTGCCGCTAACAAGGCTATCACACAGGTAATTTTAATAAAATATAAGCTAACCAGTCCTTTGAACAGTGTATTTTCATTTTGGCATTATATCTCTCGTGTGGTTAAAAATGATATCTTTAGAATATCAAAAGTTTTGATCAAATAATACTACCATTCGAGGGAAAATTCACAGTAAGAGAAGATACGATCCATCATTCCATTTTGTTTTTATTTTTTTTTTATTTTTTGCAATATACGCTAGCTAGGAGAAATTTGGAGACCAGGATGACTTTCTGTATCCTTTCATTTGAATGAATTCCCACCTAGCACAAAGTTTATACTAAGAAGTGACCTTCTCTGATGCTTCAGAATTCCCTTTTGTAATTTTTCACTTTTATTCTTTTTCATAGAGCTTTGTTGGTGAATTAGTATGTTTGGGATGAGATAATTGAGACCTGATTTGGTTAAAAGTAGCTCTGAACTGTCTCCAGGATCGAGAACATCCTCTTGCTTCCTCTCTTTAATTACAAAGCCAATTTGATTAAAAGAGTTACACTGAAGCCTCCAAAGGGTTTCATCTTCTTTCTCGAGTCTCCAAAACCATTTAGTAATAATAGCATAATTTACCAATGGACTACTACTCTTCTATTTTAGCAGCTTCCCCCACGAAATCTCGGAACACTTCTTCAAGCCTCTTACTGACCAGTAATCACAACGCCCATTAGTGGAGATAGTTTGAGTCTTGCTTTGTCTTCGTATTTCTCTTCCCCATTTTAGAGAATTATGTATCCTTTCTTATATAAATATTGGGATTCTTAAAGATAAAATTATTGTTCAAGAAAATATTCTAAATGCATCAGTAATCACATTTTCATTAGATTGTTCTTGGTTCAAATTTCCTCAACGTTGTTCGTAATGTAAATATGTAACAATAGTTTTCTTTATCTACTGAGGTAGGCATCCTGTATTATGTAAATTGCCTGTTAGCCATTTTCTTTTCCTCTGGATGATTTGTTATTAACCCCTTTTTTAATGCTCTCTCTGTTTCTTTTTTGTTCTTTTGGGATGGGGTGATGGGAATAGTATGTTGAAGTCGTTCCACAGATGGAAAAACAGAGACGGTTGGAGCAGATCCTCAGGTCCCAGGAACGGGGGTCTAAGGTTATAATTTTTTGTTCCACAAAGAGATTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGGTTTGGGGCTGCTGCAATTCATGGAGACAAATCACAAGGAGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCCCCGATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTTGACATCAAAGATATAAGGTAGGCACTGGTTTGTGCTCTTCTCTATGATATCAAGTGAAAATATTGGGACTAGAAACTTCAAAGAAAATGGACCTCATGTGACTTTCATGTTTTTGTATGCGACTTATAGTGGTATTTGTGAAGCAAATTTTGTGTATGCTACTTGTTCTATGATTTTTAGACCTGTCCTATGGTTTATTTAATTTATTTTCTATGCCAGAGTGGTGATCAACTTTGATTTTCCAACTGGAATTGAGGACTATGTCCACCGAATTGGAAGAACTGGGAGGGCTGGAGCAACGGGAATGGCCTATACCTTCTTTTGTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTGGAGGGTGCGGATCAACTTGTGCCTCCGGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGTAAGGATAGGGGCGGTTTGGGTCGTTTCGATGCAGCTATGGGTGGCAGCCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCAAGAGATGGCGGGTTTGGTGGCCGCGGTGGAATGAGAGATGGCGGATTTGGTGGCCGTGGTGGAATGAGAGATGGTCTTGCTGGTGGACGAGGTGGGAGAGGTGATTTCTTCTCTGGACGAGGTAGAGGAGGACGGGCTTTTGGTGGCCCTCCTGGAGGTCATGTTGGTTGGGGCAGGGGTGATCGTGGTGGCCCACAGGATAGGTACAATAGTGTGGATGGACGTGGGCGTGGACGTGGACAGGGTCGATTTGATAACAGAAGAGACTTCTCCAATAGGAGTAGAGGCAGTAGTTATAGTCGTAGCCCTGAAAGAGTTCGAACATGGGGTTACAGCCGAAGTCGCAGTCGCAGTCACAGCCGAAGTCGGTAGTCGTAGTAGTAGAAGTTGGAGTCGGAGTAGAAGTCGTAGCAGAAGTAGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGTTGGTCACGTCGCTATAGCCGAAGCCGTAGCCGTAGCCATGATAATCACGAGCGATCACGTGAGAAGAACTTCGATAGAAAAGACGACGTACCTCCAGAATCAGTAACTGTTACTTCTCCGGGCACACGAAAGAATGCTTTAGAAATAAGAGAAGATGGGAGGCAGCTTCCTCCAGCAGACAGTAACATCAAACCGGGGAACCCAGAAAATGGTGCAGATACAAACGATCAAATTGTAAACGCCGCAGCTCAAGTAATATGA

mRNA sequence

ATGAAAAAGGTCTTGGCGGGGAAGGAGAAAAATAATCGGAGTTCGGATCTTCATCGAGTCATGGAAACTGGGGAGTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCGGACGACCCTACTCTTCCCAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTGTTGTACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAAAAACCAGTCTCTTTGCCACCACCATTACCACTCGCTCCTCATCCTAGTGCCTCTACTTCCAAGCCTACTTCAATCCCGGAGGGTCATTCAACGCCATCAAATGGCACACTAACCCCTCATGTACAGCAAAATCATCATGTCCCTCAACAGGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATCTGATGTCACAACAGCACAGTTCTGTTGCAGGTCAGGCAATTGTTAATCACCATCCTAGCATGCAAATGGCACCAGATGGGCGACAACATAGCTTGCAACCGAACCAGGTTTTGCAGCAACAGGGGATGTTTCCGATGTCGTCGCAGCATATTGGCCAGCAGCAGGTCATGCATCAAGGTCAGAAAATGGCACATGCTAATCAACAAATATCTCAGCATCCTAACCAGCAACCCCTGCAGAATCCAGGACAACAAATACCACAGCCCTCAATCCAGCATTTAGGACAGCCAAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCATCCTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTGCAGCAAAATTCCCAGCAGCAAGTTCAACAGAGCCCTTTAGGGCAACCATTTGGTAATCACCTTGAGCAGAAGTCAGCTTTTCAGAAGAGAGAGGAGGATAATATCCAGTCAGGAAACCAAATTGGATTTTCTACTTCCCAGTTTCAACAAAGTGGTGGTACATCATCTATTCATAGTGTTCATCCTGGAACCAATTCTTCTCAAATGCAACAATACGGTTTACCTTCCGATCAAGCACGACAATTTGGTGGTTCTCCAGGAAACATGCAACAGCCGCATCCTGTGGTTCAATTGCAGCATTCGGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCCAATGGGCCCAGCTGCGATGCAGGAGAAGCAAGCCGGTTCTGAAAATTTGCCAGGCAGAGCTGGAAATGAATATTTCTTTGGCAGGAATGAGGGGCCTGGAATTGGTCCACATCAACCAAGGCTTGCAGCAATACCAATGGCAAGGAGCCAGCAGGATGCAAGGATGAGTGGTGTCCCATTTCCAAGTGTGGCACCCAGTCATCCCAGTGGAACAAGTTTTGCAGCCGGGCAATCACATAATATGTACAACCATGGGTCTGGTGGTCCATCATTGTCAAACAATGCTTTGATGGGCCCTCCCCATATTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCCACGGGTGATAATGTTCCAGCTCCATTCATGACATTTGAGGCTACTGGCTTCCCTCCGGAGATACTGAGAGAGGTGCGATATCTGCTCCGGAGGAGGAGCATATGTCGGAATCTTTTAGTAGAGTGTTGGCCCTTTGACCAAATCACACCTGATGTGACTGAGATGTCTTGCTTATTGGCTCTGCTTAATATGTCTTTATTGCCATCTTTTGTTGCCTCGAGTTGCTTCTATATATACTGCTGGTTTCTCATCTCCCACGCCAATTCAAGCACAAACATGGCCGATTGCCCTGCAAGGCAGTGCCGAAATAACCCTCAAAATGGACCAACGGTGTTGGTTCTGGCTCCTACTAGGGAGCTTGCCACTCAAATACAAGATGAGGCGATTAAATTTGGGAGGGCTTCCAGGATTTGTTGTACGTGCTTGTATGGTGGTGCTCCGAAAGGTCCTCAGCTTAAAGAGTTAGATCGTGGGGCTGATATTGTTGTGGCAACTCCTGGCCGACTTAATGATATACTAGAAATGAAAATGATCAACTTTAGGCAAGTTTCACTTCTTGTGCTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCCCAAATTAGAAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCGACCTGGCCCAAGGAAGTAAGAAAAATAGCAAATGATCTTCTTGTCAATTCTGTCCAGGTGAATATTGGAAGCGTTGATGAACTTGCCGCTAACAAGGCTATCACACAGTATGTTGAAGTCGTTCCACAGATGGAAAAACAGAGACGGTTGGAGCAGATCCTCAGGTCCCAGGAACGGGGGTCTAAGGTTATAATTTTTTGTTCCACAAAGAGATTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGGTTTGGGGCTGCTGCAATTCATGGAGACAAATCACAAGGAGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCCCCGATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTTGACATCAAAGATATAAGAGTGGTGATCAACTTTGATTTTCCAACTGGAATTGAGGACTATGTCCACCGAATTGGAAGAACTGGGAGGGCTGGAGCAACGGGAATGGCCTATACCTTCTTTTGTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTGGAGGGTGCGGATCAACTTGTGCCTCCGGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGTAAGGATAGGGGCGGTTTGGGTCGTTTCGATGCAGCTATGGGTGGCAGCCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCAAGAGATGGCGGGTTTGGTGGCCGCGGTGGAATGAGAGATGGCGGATTTGGTGGCCGTGGTGGAATGAGAGATGGTCTTGCTGGTGGACGAGGGGTGATCGTGGTGGCCCACAGGATAGGTACAATAGTGTGGATGGACGTGGGCGTGGACGTGGACAGGGTCGATTTGATAACAGAAGAGACTTCTCCAATAGGAGTAGAGGCAGTAGTTATAGTCGTAGCCCTGAAAGAGTTCGAACATGGGGTTACAGCCGAAGTCGCAGTCGCAGTCACAGCCGAAGTCGGTAGTCGTAGTAGTAGAAGTTGGAGTCGGAGTAGAAGTCGTAGCAGAAGTAGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGTTGGTCACGTCGCTATAGCCGAAGCCGTAGCCGTAGCCATGATAATCACGAGCGATCACGTGAGAAGAACTTCGATAGAAAAGACGACGTACCTCCAGAATCAGTAACTGTTACTTCTCCGGGCACACGAAAGAATGCTTTAGAAATAAGAGAAGATGGGAGGCAGCTTCCTCCAGCAGACAGTAACATCAAACCGGGGAACCCAGAAAATGGTGCAGATACAAACGATCAAATTGTAAACGCCGCAGCTCAAGTAATATGA

Coding sequence (CDS)

ATGAAAAAGGTCTTGGCGGGGAAGGAGAAAAATAATCGGAGTTCGGATCTTCATCGAGTCATGGAAACTGGGGAGTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCGGACGACCCTACTCTTCCCAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTGTTGTACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAAAAACCAGTCTCTTTGCCACCACCATTACCACTCGCTCCTCATCCTAGTGCCTCTACTTCCAAGCCTACTTCAATCCCGGAGGGTCATTCAACGCCATCAAATGGCACACTAACCCCTCATGTACAGCAAAATCATCATGTCCCTCAACAGGAAGGCCAATCAAACAGCCAGCTTTCTCAACAACCTGGACATCTGATGTCACAACAGCACAGTTCTGTTGCAGGTCAGGCAATTGTTAATCACCATCCTAGCATGCAAATGGCACCAGATGGGCGACAACATAGCTTGCAACCGAACCAGGTTTTGCAGCAACAGGGGATGTTTCCGATGTCGTCGCAGCATATTGGCCAGCAGCAGGTCATGCATCAAGGTCAGAAAATGGCACATGCTAATCAACAAATATCTCAGCATCCTAACCAGCAACCCCTGCAGAATCCAGGACAACAAATACCACAGCCCTCAATCCAGCATTTAGGACAGCCAAACATGCAAAATCAAACCCCATTAGTTGGCCAGCCTCAAGGTCCGCAATATGGTCAGCAGCATCCTCAGTATATGGGTTACCAGCAAAGCGTACATCCAAGTGTGCAGCAAAATTCCCAGCAGCAAGTTCAACAGAGCCCTTTAGGGCAACCATTTGGTAATCACCTTGAGCAGAAGTCAGCTTTTCAGAAGAGAGAGGAGGATAATATCCAGTCAGGAAACCAAATTGGATTTTCTACTTCCCAGTTTCAACAAAGTGGTGGTACATCATCTATTCATAGTGTTCATCCTGGAACCAATTCTTCTCAAATGCAACAATACGGTTTACCTTCCGATCAAGCACGACAATTTGGTGGTTCTCCAGGAAACATGCAACAGCCGCATCCTGTGGTTCAATTGCAGCATTCGGGTACTGAATTGACTCATCGCCAACATCATTCTAGATTCCAAGATCCAATGGGCCCAGCTGCGATGCAGGAGAAGCAAGCCGGTTCTGAAAATTTGCCAGGCAGAGCTGGAAATGAATATTTCTTTGGCAGGAATGAGGGGCCTGGAATTGGTCCACATCAACCAAGGCTTGCAGCAATACCAATGGCAAGGAGCCAGCAGGATGCAAGGATGAGTGGTGTCCCATTTCCAAGTGTGGCACCCAGTCATCCCAGTGGAACAAGTTTTGCAGCCGGGCAATCACATAATATGTACAACCATGGGTCTGGTGGTCCATCATTGTCAAACAATGCTTTGATGGGCCCTCCCCATATTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCAACAGCATGAAGTAACTGCCACGGGTGATAATGTTCCAGCTCCATTCATGACATTTGAGGCTACTGGCTTCCCTCCGGAGATACTGAGAGAGGTGCGATATCTGCTCCGGAGGAGGAGCATATGTCGGAATCTTTTAGTAGAGTGTTGGCCCTTTGACCAAATCACACCTGATGTGACTGAGATGTCTTGCTTATTGGCTCTGCTTAATATGTCTTTATTGCCATCTTTTGTTGCCTCGAGTTGCTTCTATATATACTGCTGGTTTCTCATCTCCCACGCCAATTCAAGCACAAACATGGCCGATTGCCCTGCAAGGCAGTGCCGAAATAACCCTCAAAATGGACCAACGGTGTTGGTTCTGGCTCCTACTAGGGAGCTTGCCACTCAAATACAAGATGAGGCGATTAAATTTGGGAGGGCTTCCAGGATTTGTTGTACGTGCTTGTATGGTGGTGCTCCGAAAGGTCCTCAGCTTAAAGAGTTAGATCGTGGGGCTGATATTGTTGTGGCAACTCCTGGCCGACTTAATGATATACTAGAAATGAAAATGATCAACTTTAGGCAAGTTTCACTTCTTGTGCTTGATGAAGCTGATCGGATGCTTGACATGGGATTTGAACCCCAAATTAGAAAGATTGTGAATGAAATACCACCACGCAGACAAACTCTTATGTATACAGCGACCTGGCCCAAGGAAGTAAGAAAAATAGCAAATGATCTTCTTGTCAATTCTGTCCAGGTGAATATTGGAAGCGTTGATGAACTTGCCGCTAACAAGGCTATCACACAGTATGTTGAAGTCGTTCCACAGATGGAAAAACAGAGACGGTTGGAGCAGATCCTCAGGTCCCAGGAACGGGGGTCTAAGGTTATAATTTTTTGTTCCACAAAGAGATTGTGTGATCAGCTTGCACGGAATCTTGGGCGTGGGTTTGGGGCTGCTGCAATTCATGGAGACAAATCACAAGGAGAGCGTGATTGGGTATTGAACCAGTTTCGTAGCGGAAAGTCCCCGATACTAGTTGCCACAGATGTTGCTGCCCGCGGGCTTGACATCAAAGATATAAGAGTGGTGATCAACTTTGATTTTCCAACTGGAATTGAGGACTATGTCCACCGAATTGGAAGAACTGGGAGGGCTGGAGCAACGGGAATGGCCTATACCTTCTTTTGTGAACAGGATTGGAAATATGCTGCTGATTTGATTAAAGTACTGGAGGGTGCGGATCAACTTGTGCCTCCGGAGTTGCGAGATATGGCTATGCGTGGGGGGCCGAGTTTTGGTAAGGATAGGGGCGGTTTGGGTCGTTTCGATGCAGCTATGGGTGGCAGCCGCTGGGATTCTGGAGGCCGAGGTGGCATGAGAGATGGTGGGTTTGGTGGTCGTGGTGGTGCAAGAGATGGCGGGTTTGGTGGCCGCGGTGGAATGAGAGATGGCGGATTTGGTGGCCGTGGTGGAATGAGAGATGGTCTTGCTGGTGGACGAGGGGTGATCGTGGTGGCCCACAGGATAGGTACAATAGTGTGGATGGACGTGGGCGTGGACGTGGACAGGGTCGATTTGATAACAGAAGAGACTTCTCCAATAGGAGTAGAGGCAGTAGTTATAGTCGTAGCCCTGAAAGAGTTCGAACATGGGGTTACAGCCGAAGTCGCAGTCGCAGTCACAGCCGAAGTCGGTAGTCGTAGTAGTAGAAGTTGGAGTCGGAGTAGAAGTCGTAGCAGAAGTAGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGTTGGTCACGTCGCTATAGCCGAAGCCGTAGCCGTAGCCATGATAATCACGAGCGATCACGTGAGAAGAACTTCGATAGAAAAGACGACGTACCTCCAGAATCAGTAACTGTTACTTCTCCGGGCACACGAAAGAATGCTTTAGAAATAAGAGAAGATGGGAGGCAGCTTCCTCCAGCAGACAGTAACATCAAACCGGGGAACCCAGAAAATGGTGCAGATACAAACGATCAAATTGTAAACGCCGCAGCTCAAGTAATATGA

Protein sequence

MKKVLAGKEKNNRSSDLHRVMETGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQHSSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHANQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQSVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGTSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRFQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSGVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRGVIVVAHRIGTIVWMDVGVDVDRVDLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSRSRSRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIREDGRQLPPADSNIKPGNPENGADTNDQIVNAAAQVI

Homology

[Close]

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot
Match: Q9SQV1 (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 1.4e-231
Identity = 570/1139 (50.04%), Postives = 677/1139 (59.44%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            M T E  P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP  
Sbjct: 1    MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
                 SA+T K   IP     PS+G       Q H    ++ +    +SQQ G    QQ 
Sbjct: 61   ----HSATTPKLAQIP----VPSSG-------QGHQAQHEQAKPVGHVSQQHGF---QQ- 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
                                      QP Q   Q     M  QH  QQ     GQ+    
Sbjct: 121  --------------------------QPQQFPSQHVRPQMMQQHPAQQMPQQSGQQFP-- 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
             QQ SQ     P  +P  Q  QP+ Q   Q  MQNQ   + Q    QY      YMG++ 
Sbjct: 181  -QQQSQSMVPHPHGHPSVQTYQPTTQQ-QQQGMQNQHSQMPQQLSHQYAHSQQHYMGFRP 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
             +     QNS Q  Q  P GQ F +  E  S   KRE D    G + GFS      S  +
Sbjct: 241  HMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQPHLPNSERS 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
             S ++      +SQ     L    A++  G   N      V Q Q  G  L H+Q   R 
Sbjct: 301  PSQNTHFEANAASQKTNANLA--MAQKCNGPQANA----AVTQFQQPGANLIHQQLGPRA 360

Query: 381  QDPMGPAAMQEKQAGS---------ENLPGRAGNE-YFFGRNEGPGIGPHQPRLAAIPMA 440
             + M    + +K   S          NL  R GN+ Y   R E P  G      AA+P  
Sbjct: 361  PNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQPLHPAAMP-- 420

Query: 441  RSQQDARMSGVPFPSVAPSHPSGTSFAAGQS-HNMYNHGSGGPSLSNNALMGPPHIGASD 500
               +D R+SG P        P+    A GQ+ H  Y H   GP+  N +L+ P  + + D
Sbjct: 421  ---KDIRISGGP--------PTNADPAMGQTGHGTYGH--AGPAFPNKSLVRPHFVTSPD 480

Query: 501  VTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVEC 560
            V ++SPVE+YR+QHEVT TG+N+PAP++TFE++G PPEILRE+  L         +  + 
Sbjct: 481  VPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILREL--LSAGFPSPTPIQAQT 540

Query: 561  WPFDQITPDVTEMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQC 620
            WP    + D+  ++   +   +  L+P+F+                           R C
Sbjct: 541  WPIALQSRDIVAIAKTGSGKTLGYLIPAFIL-------------------------LRHC 600

Query: 621  RNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADI 680
            RN+ +NGPTVL+LAPTRELATQIQDEA++FGR+SRI CTCLYGGAPKGPQLKEL+RGADI
Sbjct: 601  RNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADI 660

Query: 681  VVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 740
            VVATPGRLNDILEMKMI+F+QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA
Sbjct: 661  VVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 720

Query: 741  TWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERG 800
            TWPKEVRKIA+DLLVN VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERG
Sbjct: 721  TWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERG 780

Query: 801  SKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAA 860
            SKVIIFCSTKRLCD LAR++GR FGA  IHGDK+QGERDWVLNQFRSGKS +L+ATDVAA
Sbjct: 781  SKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 840

Query: 861  RGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEG 920
            RGLDIKDIRVVIN+DFPTG+EDYVHRIGRTGRAGATG+A+TFF EQDWKYA DLIKVLEG
Sbjct: 841  RGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEG 900

Query: 921  ADQLVPPELRDMAMR----GGPSFGKDRGGL-GRFDAAMGGSRWDSGGRGGMRDGGFGGR 980
            A+Q VPP++RD+AMR    GGP + +DR G+  RFD+  GG+RWDSGG  G R GGF GR
Sbjct: 901  ANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGR 960

Query: 981  G---GARDGGFGGRGGMRDGGFGGRG---GMRD---GLAGGRGVIVVAHRIGTIVWMDVG 1040
                G R+GGFGG    R+GGFGGRG   GMRD   G  G RG        G +     G
Sbjct: 961  EGGFGGREGGFGG----REGGFGGRGGRFGMRDDSFGRGGNRGRGFTGPDAGHMNVGGRG 1020

Query: 1041 VDVDRVDLITEETSPIGVEAVVIVVALKEFEHGV-----TAEVAVAVTAEVGSRSSRSWS 1100
                  +    E+   G  +       + F  GV         + + + ++     RS S
Sbjct: 1021 GFGRFGNNNNMESRGFGRGSG------RGFGRGVGRFDNRRGRSRSRSPDLVRPRRRSSS 1029

Query: 1101 RSRSRSRSRSRSRSRSRSRSWSRRYSRS--RSRSHDNHERSREKN------FDRKDDVP 1121
             SRSRSRS S SRSRSRSRSWSR  SRS   SR    H RSR  +      ++R+D  P
Sbjct: 1081 YSRSRSRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRSYSRSPSPVYERRDRAP 1029

[Close]

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot
Match: Q9LYJ9 (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2)

HSP 1 Score: 564.7 bits (1454), Expect = 2.5e-159
Identity = 336/593 (56.66%), Postives = 405/593 (68.30%), Query Frame = 0


Query: 422 PRLAAIPMARSQQDARMSGVPF-----------PSVAPSHPSGTSF-AAGQ----SHNMY 481
           P+LAAIP++ S Q  + S   F            S  P   SG+ F  AG+    S N  
Sbjct: 53  PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112

Query: 482 NHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFP 541
             G G  S   ++  GPP   A +   +SP E Y ++HE+T +G  VP P M+FEATG P
Sbjct: 113 ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172

Query: 542 PEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMS-LLPSFVASSCFY 601
            E+LREV       S    +  + WP      D+  ++   +   +  L+P F+      
Sbjct: 173 NELLREV--YSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM------ 232

Query: 602 IYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRI 661
                                ++  N+ + GPT+LVL+PTRELATQIQ EA+KFG++S+I
Sbjct: 233 -------------------HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKI 292

Query: 662 CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDM 721
            C CLYGGAPKGPQLKE++RG DIVVATPGRLNDILEMK I+  QVS LVLDEADRMLDM
Sbjct: 293 SCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDM 352

Query: 722 GFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQ 781
           GFEPQIRKIVNE+P +RQTLMYTATWPKEVRKIA DLLVN  QVNIG+VDEL ANK+ITQ
Sbjct: 353 GFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQ 412

Query: 782 YVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQG 841
            +EV+  MEK  RLEQILRSQE GSK+IIFCSTKR+CDQLARNL R FGAAAIHGDKSQ 
Sbjct: 413 TIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQA 472

Query: 842 ERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGAT 901
           ERD VLNQFRSG++P+LVATDVAARGLD+KDIRVV+N+DFP G+EDYVHRIGRTGRAGAT
Sbjct: 473 ERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGAT 532

Query: 902 GMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGG 961
           G+AYTFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+ +F      
Sbjct: 533 GLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRGG-------GGMNKFRRWGTP 592

Query: 962 SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRG 998
           S    GGRGG  D G+GGRG   + G+G RG   D G+GGRG      +GGRG
Sbjct: 593 SSGGGGGRGGYGDSGYGGRG---ESGYGSRG---DSGYGGRGD-----SGGRG 597

HSP 2 Score: 73.9 bits (180), Expect = 1.3e-11
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLAPHPSASTSKPT 93
           RYAP+DP LPKPWKGL+D  TG LY+WNPETNVTQYE+P S  PP  LA  P +S+ +  
Sbjct: 9   RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP-KLAAIPVSSSVQTN 68

Query: 94  SIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQHSSVAGQA 148
              +  S  ++G       +    P+ +  S    + + G + S   +S  G A
Sbjct: 69  Q--QSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNA 119

[Close]

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot
Match: Q8H136 (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2)

HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-156
Identity = 316/530 (59.62%), Postives = 380/530 (71.70%), Query Frame = 0


Query: 459 GQSHNMYNHGSG---GPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAP 518
           G+S   Y++G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 519 FMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLP 578
            M+FEATGFPPE+LREV  L    S    +  + WP      D+           +++  
Sbjct: 158 LMSFEATGFPPELLREV--LSAGFSAPTPIQAQSWPIAMQGRDI-----------VAIAK 217

Query: 579 SFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEA 638
           +    +  Y+   FL               ++ RN+ + GPT+LVL+PTRELATQIQ+EA
Sbjct: 218 TGSGKTLGYLIPGFL-------------HLQRIRNDSRMGPTILVLSPTRELATQIQEEA 277

Query: 639 IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 698
           +KFGR+SRI CTCLYGGAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVL
Sbjct: 278 VKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVL 337

Query: 699 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 758
           DEADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDE
Sbjct: 338 DEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDE 397

Query: 759 LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 818
           L ANK+ITQ++EVV  MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAA
Sbjct: 398 LVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 457

Query: 819 AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 878
           AIHGDKSQ ERD VLNQFRSG++P+LVATDVAARGLD+KDIR V+N+DFP G+EDYVHRI
Sbjct: 458 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 517

Query: 879 GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGL 938
           GRTGRAGATG A+TFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+
Sbjct: 518 GRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGM 577

Query: 939 GRFDAAMGGSRW--DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 984
            +F      SRW   SGGRG   D G+GGR     G F  R      G+G
Sbjct: 578 NKF------SRWGPPSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 80.9 bits (198), Expect = 1.1e-13
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLAPHPSASTSKP 93
           RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP    +P  S S+S  
Sbjct: 11  RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 94  TSIPEGHSTPSN 105
               + ++ P +
Sbjct: 71  VQQTDAYAPPKD 80

[Close]

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot
Match: P46942 (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.0e-152
Identity = 323/566 (57.07%), Postives = 387/566 (68.37%), Query Frame = 0


Query: 436 ARMSGVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPP-HIGASDVTNMS 495
           A  S V   S       G  + A   HN  ++     S S+    G   H G   +   S
Sbjct: 61  AHKSSVFVSSSVEKPSQGQRYDADGGHNRGSNNKIARSSSDRFHDGTSVHEGYGSLGVGS 120

Query: 496 PV--EVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPF 555
            +  E Y +++E++ TG +VPAP  +FEATGFP EI+RE+       S    +  + WP 
Sbjct: 121 DISQESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVREMHQ--AGFSAPTPIQAQSWPI 180

Query: 556 DQITPDVTEMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNN 615
                D+  ++   +   +  L+P+F+                           +Q R N
Sbjct: 181 ALQGRDIVAIAKTGSGKTLGYLMPAFI-------------------------HLQQRRKN 240

Query: 616 PQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVA 675
           PQ GPT+LVL+PTRELATQIQ EA+KFG++SRI CTCLYGGAPKGPQL+EL RG DIVVA
Sbjct: 241 PQLGPTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVA 300

Query: 676 TPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWP 735
           TPGRLNDILEM+ ++  QVS LVLDEADRMLDMGFEPQIRKIV E+P +RQTLMYTATWP
Sbjct: 301 TPGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVPVQRQTLMYTATWP 360

Query: 736 KEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKV 795
           K VRKIA DLLVNSVQVNIG+VDEL ANK+ITQ++EVV  MEKQRR+EQILRS+E GSK+
Sbjct: 361 KGVRKIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPGSKI 420

Query: 796 IIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGL 855
           IIFCSTK++CDQL+RNL R FGAAAIHGDKSQGERD+VL+QFR+G+SP+LVATDVAARGL
Sbjct: 421 IIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGL 480

Query: 856 DIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQ 915
           DIKDIRVVIN+DFPTGIEDYVHRIGRTGRAGA+G+AYTFF +QD K+A DL+KVLEGA+Q
Sbjct: 481 DIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQ 540

Query: 916 LVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGF 975
            VP ELRDMA RG        GG+GR       + W SG       GG GGRGG  +  +
Sbjct: 541 CVPTELRDMASRG--------GGMGR-----ARNHWGSG------PGGRGGRGGPYNSSY 576

Query: 976 GGRGGMRDGGFGGRGGMRDGLAGGRG 998
            G    R+GG G   G RD    G G
Sbjct: 601 VG----RNGGHGYDRGSRDSDRYGHG 576

HSP 2 Score: 82.4 bits (202), Expect = 3.7e-14
Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 30  SLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLAPHP---- 89
           S GP YAP+DPTLPKPWKGL+DG+TG +Y+WNPETN TQYE+PV     +    H     
Sbjct: 8   SAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPVPSSHAVSAPAHKSSVF 67

Query: 90  -SASTSKPT-----SIPEGHSTPSNGTLTPHVQQNHH 117
            S+S  KP+         GH+  SN  +        H
Sbjct: 68  VSSSVEKPSQGQRYDADGGHNRGSNNKIARSSSDRFH 104

[Close]

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot
Match: Q5JKF2 (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2)

HSP 1 Score: 533.9 bits (1374), Expect = 4.7e-150
Identity = 346/620 (55.81%), Postives = 398/620 (64.19%), Query Frame = 0


Query: 497  EVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQIT 556
            E YR +HE+T  GDNVPAP  +FE  GFPPEIL+E++      S    +  + WP     
Sbjct: 130  EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQ--RAGFSSPTPIQAQSWPIALQC 189

Query: 557  PDVTEMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNG 616
             DV  ++   +   +  LLP F+                           ++ +NNP++G
Sbjct: 190  QDVVAIAKTGSGKTLGYLLPGFM-------------------------HIKRLQNNPRSG 249

Query: 617  PTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGR 676
            PTVLVLAPTRELATQI +EA+KFGR+SRI  TCLYGGAPKGPQL++LDRG D+VVATPGR
Sbjct: 250  PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGR 309

Query: 677  LNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVR 736
            LNDILEM+ I+ +QVS LVLDEADRMLDMGFEPQIRKIV EIPPRRQTLMYTATWPKEVR
Sbjct: 310  LNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVR 369

Query: 737  KIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFC 796
            +IA DLLV+ VQV IGSVDEL AN AITQ VE++   EK RRLEQILRSQ+ GSKV+IFC
Sbjct: 370  RIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFC 429

Query: 797  STKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKD 856
            +TKR+CDQLAR L R FGA+AIHGDKSQ ER+ VL+ FRSG+SPILVATDVAARGLDIKD
Sbjct: 430  TTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKD 489

Query: 857  IRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPP 916
            IRVVIN+DFPTGIEDYVHRIGRTGRAGATG+AYTFFC+QD KYAADLIK+LEGA+Q VP 
Sbjct: 490  IRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPR 549

Query: 917  ELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGG--ARDGGFGG 976
            +L DMA RGG      RGG  R   A   +R D GG     D  +GGR G     G    
Sbjct: 550  DLADMASRGG------RGGRKRNRWA---TRSDRGGSHSELDSRYGGRDGLSGSSGRLDS 609

Query: 977  RGGMRDGGFGGRGGMRDGLAGGRGVIVVAHRIGTIVWMDVGVDVDRVDLITEETSPIGVE 1036
                R   +G  G  R     GRG      R  +                          
Sbjct: 610  SRSSRRHDYGDDGRSR---RSGRGRSRSRSRSDS-------------------------- 656

Query: 1037 AVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSRSRSRSRSRSRSW--S 1096
                                         R SRS  RSR  SRSR+RSRSRSRSRS+  +
Sbjct: 670  ----------------------------DRYSRSPKRSRRHSRSRTRSRSRSRSRSYTRN 656

Query: 1097 RRYSRSRSRS---HDNHERS 1109
            RR SRSRSRS      HERS
Sbjct: 730  RRASRSRSRSPGASRRHERS 656

HSP 2 Score: 98.2 bits (243), Expect = 6.5e-19
Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 33 PRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV----SLPPPLPLAPHPSAS 89
          PRYAPDDP+LPKPW+GL+DG+TG LYYWNPETN+TQYEKP+     LPPP PL P P  S
Sbjct: 10 PRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPPPPPLPPPPPRS 69

[Close]

BLAST of Csor.00g251480 vs. NCBI nr
Match: KAG6597587.1 (DEAD-box ATP-dependent RNA helicase 46, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2277 bits (5900), Expect = 0.0
Identity = 1175/1175 (100.00%), Postives = 1175/1175 (100.00%), Query Frame = 0


Query: 1    MKKVLAGKEKNNRSSDLHRVMETGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYW 60
            MKKVLAGKEKNNRSSDLHRVMETGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYW
Sbjct: 1    MKKVLAGKEKNNRSSDLHRVMETGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYW 60

Query: 61   NPETNVTQYEKPVSLPPPLPLAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQ 120
            NPETNVTQYEKPVSLPPPLPLAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQ
Sbjct: 61   NPETNVTQYEKPVSLPPPLPLAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQ 120

Query: 121  EGQSNSQLSQQPGHLMSQQHSSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPM 180
            EGQSNSQLSQQPGHLMSQQHSSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPM
Sbjct: 121  EGQSNSQLSQQPGHLMSQQHSSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPM 180

Query: 181  SSQHIGQQQVMHQGQKMAHANQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLV 240
            SSQHIGQQQVMHQGQKMAHANQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLV
Sbjct: 181  SSQHIGQQQVMHQGQKMAHANQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLV 240

Query: 241  GQPQGPQYGQQHPQYMGYQQSVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDN 300
            GQPQGPQYGQQHPQYMGYQQSVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDN
Sbjct: 241  GQPQGPQYGQQHPQYMGYQQSVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDN 300

Query: 301  IQSGNQIGFSTSQFQQSGGTSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHP 360
            IQSGNQIGFSTSQFQQSGGTSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHP
Sbjct: 301  IQSGNQIGFSTSQFQQSGGTSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHP 360

Query: 361  VVQLQHSGTELTHRQHHSRFQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPH 420
            VVQLQHSGTELTHRQHHSRFQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPH
Sbjct: 361  VVQLQHSGTELTHRQHHSRFQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPH 420

Query: 421  QPRLAAIPMARSQQDARMSGVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALM 480
            QPRLAAIPMARSQQDARMSGVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALM
Sbjct: 421  QPRLAAIPMARSQQDARMSGVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALM 480

Query: 481  GPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRS 540
            GPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRS
Sbjct: 481  GPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRS 540

Query: 541  ICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLPSFVASSCFYIYCWFLISHANSSTNM 600
            ICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLPSFVASSCFYIYCWFLISHANSSTNM
Sbjct: 541  ICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLPSFVASSCFYIYCWFLISHANSSTNM 600

Query: 601  ADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLK 660
            ADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLK
Sbjct: 601  ADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLK 660

Query: 661  ELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 720
            ELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR
Sbjct: 661  ELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR 720

Query: 721  RQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQ 780
            RQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQ
Sbjct: 721  RQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQ 780

Query: 781  ILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPI 840
            ILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPI
Sbjct: 781  ILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPI 840

Query: 841  LVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAA 900
            LVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAA
Sbjct: 841  LVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAA 900

Query: 901  DLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGF 960
            DLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGF
Sbjct: 901  DLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGF 960

Query: 961  GGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRGVIVVAHRIGTIVWMDVGVDVDRV 1020
            GGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRGVIVVAHRIGTIVWMDVGVDVDRV
Sbjct: 961  GGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRGVIVVAHRIGTIVWMDVGVDVDRV 1020

Query: 1021 DLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSRSR 1080
            DLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSRSR
Sbjct: 1021 DLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSRSR 1080

Query: 1081 SRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRE 1140
            SRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRE
Sbjct: 1081 SRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRE 1140

Query: 1141 DGRQLPPADSNIKPGNPENGADTNDQIVNAAAQVI 1175
            DGRQLPPADSNIKPGNPENGADTNDQIVNAAAQVI
Sbjct: 1141 DGRQLPPADSNIKPGNPENGADTNDQIVNAAAQVI 1175

[Close]

BLAST of Csor.00g251480 vs. NCBI nr
Match: XP_022964311.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1880 bits (4871), Expect = 0.0
Identity = 1017/1175 (86.55%), Postives = 1034/1175 (88.00%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPHPSASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMS QHIGQQQVMHQGQKMAHA
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQN GQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSVQQNSQQQVQ+SPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG
Sbjct: 361  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPS APSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDRG LGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRGALGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAGGRGV-------------IVVAHRIGTIVWM--DVGVDVDRVDLIT 1040
            GGFGGRGGMRDGLAGGRG                     G + W   D G   DR   + 
Sbjct: 961  GGFGGRGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVD 1020

Query: 1041 EETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSR---SRS 1100
                  G               G +   +       G   SRS SRSRS SRS    SRS
Sbjct: 1021 GRGRGRGQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRSGSRSSRSWSRS 1080

Query: 1101 RSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRED 1160
            RSRSRSRSWSRRYSRSRSRSHDNHERS EKNFDRKDD+PPESVT TSPGTRKNA+EIRED
Sbjct: 1081 RSRSRSRSWSRRYSRSRSRSHDNHERSHEKNFDRKDDIPPESVTATSPGTRKNAIEIRED 1140

Query: 1161 GRQLPPADSN-IKPGNPENGADTNDQIVNAAAQVI 1175
            GRQLPPADSN IKPGNPENGADTNDQIVNAAAQVI
Sbjct: 1141 GRQLPPADSNNIKPGNPENGADTNDQIVNAAAQVI 1148

[Close]

BLAST of Csor.00g251480 vs. NCBI nr
Match: XP_022964154.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita moschata] >XP_022964229.1 DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1872 bits (4850), Expect = 0.0
Identity = 1016/1186 (85.67%), Postives = 1035/1186 (87.27%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPHPSASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMS QHIGQQQVMHQGQKMAHA
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQN GQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSVQQNSQQQVQ+SPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG
Sbjct: 361  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPS APSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDRG LGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRGALGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAGGRGVI---VVAHRIGT---------------------IVWM--DV 1040
            GGFGGRGGMRDG  GGRG +   +   R G                      + W   D 
Sbjct: 961  GGFGGRGGMRDGGFGGRGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDR 1020

Query: 1041 GVDVDRVDLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRS 1100
            G   DR   +       G               G +   +       G   SRS SRSRS
Sbjct: 1021 GGPQDRYSSVDGRGRGRGQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRS 1080

Query: 1101 RSRSR---SRSRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPG 1160
             SRS    SRSRSRSRSRSWSRRYSRSRSRSHDNHERS EKNFDRKDD+PPESVT TSPG
Sbjct: 1081 GSRSSRSWSRSRSRSRSRSWSRRYSRSRSRSHDNHERSHEKNFDRKDDIPPESVTATSPG 1140

Query: 1161 TRKNALEIREDGRQLPPADSN-IKPGNPENGADTNDQIVNAAAQVI 1175
            TRKNA+EIREDGRQLPPADSN IKPGNPENGADTNDQIVNAAAQVI
Sbjct: 1141 TRKNAIEIREDGRQLPPADSNNIKPGNPENGADTNDQIVNAAAQVI 1159

[Close]

BLAST of Csor.00g251480 vs. NCBI nr
Match: XP_023539269.1 (DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo] >XP_023539270.1 DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1870 bits (4845), Expect = 0.0
Identity = 1012/1184 (85.47%), Postives = 1033/1184 (87.25%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPHPSASTSKPTSIPEGHS PSNGTLTPHVQQ+HHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQSHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVAGQAIVNHHPSMQMAPDGRQHS+QPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQ PQY+GYQQ
Sbjct: 181  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYIGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSVQQN QQQVQQSPLGQPFGNHLEQKSAFQKREEDNI+SGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSVQQNPQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIESGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQD RMSG
Sbjct: 361  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPSVAP HPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSVAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAGGRGV-------------IVVAHRIGTIVWM--DVGVDVDRVDLIT 1040
            GGFGGRGGMRDGLAGGRG                     G + W   D G   DR + + 
Sbjct: 961  GGFGGRGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWGRGDRGGPQDRYNSVD 1020

Query: 1041 EETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEV------------GSRSSRSWSRSR 1100
                  G          ++F +             V            GS SSRSWSRSR
Sbjct: 1021 GRGRGRGQGRFD---NRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSHSSRSWSRSR 1080

Query: 1101 SRSRSRSRSRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTR 1160
            SRSRSRSR      SRSWSRR SRSRSRSHDNHERSREKNFDRKDDVP ESVT TSP TR
Sbjct: 1081 SRSRSRSR------SRSWSRRNSRSRSRSHDNHERSREKNFDRKDDVPTESVTATSPATR 1140

Query: 1161 KNALEIREDGRQLPPADSN-IKPGNPENGADTNDQIVNAAAQVI 1175
            KNA EIREDGRQLPPADSN I+PGNPENGADTNDQIVN AAQVI
Sbjct: 1141 KNAFEIREDGRQLPPADSNNIEPGNPENGADTNDQIVNTAAQVI 1148

[Close]

BLAST of Csor.00g251480 vs. NCBI nr
Match: XP_022972187.1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita maxima] >XP_022972188.1 DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1818 bits (4708), Expect = 0.0
Identity = 993/1190 (83.45%), Postives = 1014/1190 (85.21%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPP LGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPYLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPH SASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHSSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVA QAIVNHHPSMQMAPDGRQHS+QPNQVLQQQGMFP+SSQHI QQQVMHQGQKMAHA
Sbjct: 121  SSVADQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPISSQHISQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQ PQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSV     QQVQQSPLGQPFGNHLEQKSAFQKREED IQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSV-----QQVQQSPLGQPFGNHLEQKSAFQKREEDKIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQ GSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQD RMSG
Sbjct: 361  QDPMGPAAMQEKQTGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPSVAP HPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSVAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMI+FRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEK RRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKHRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGG--- 980
            MAMRGGPSFGKDR  LGRFDAAMG SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGG   
Sbjct: 901  MAMRGGPSFGKDRSALGRFDAAMGDSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGARD 960

Query: 981  --------MRDGGFGGRGGMRDGLAGGRGV------------IVVAHRIGTIVWM--DVG 1040
                    MRDGGFGGRGGMRDGLAGGRG                    G + W   D G
Sbjct: 961  GGFGGRSGMRDGGFGGRGGMRDGLAGGRGGRGDFFSGRGRGRAFGGPPGGHVGWGRGDRG 1020

Query: 1041 VDVDRVDLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEV------------GS 1100
               DR + +       G          ++F H             V             S
Sbjct: 1021 GPQDRYNSVDGRGRGRGQGRFD---NRRDFSHRSRGRSYSRSPERVRTWGYSRSRSRSSS 1080

Query: 1101 RSSRSWSRSRSRSRSRSRSRSRSRSRSWSRRYSRSRSRS----HDNHERSREKNFDRKDD 1160
            RSSRSWS+SRSRSRSRSR      SRSWSRRYSRSRSRS    HDNHERSREKNFDRKDD
Sbjct: 1081 RSSRSWSQSRSRSRSRSR------SRSWSRRYSRSRSRSRSRSHDNHERSREKNFDRKDD 1140

Query: 1161 VPPESVTVTSPGTRKNALEIREDGRQLPPADSN-IKPGNPENGADTNDQI 1167
            VPPESVT TSPGTRKNA E REDGRQLPPADSN I+PGNPENGADTNDQ+
Sbjct: 1141 VPPESVTATSPGTRKNAFETREDGRQLPPADSNNIEPGNPENGADTNDQL 1149

[Close]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL
Match: A0A6J1HIK1 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464240 PE=4 SV=1)

HSP 1 Score: 1880 bits (4871), Expect = 0.0
Identity = 1017/1175 (86.55%), Postives = 1034/1175 (88.00%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPHPSASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMS QHIGQQQVMHQGQKMAHA
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQN GQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSVQQNSQQQVQ+SPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG
Sbjct: 361  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPS APSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDRG LGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRGALGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAGGRGV-------------IVVAHRIGTIVWM--DVGVDVDRVDLIT 1040
            GGFGGRGGMRDGLAGGRG                     G + W   D G   DR   + 
Sbjct: 961  GGFGGRGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDRGGPQDRYSSVD 1020

Query: 1041 EETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRSRSRSR---SRS 1100
                  G               G +   +       G   SRS SRSRS SRS    SRS
Sbjct: 1021 GRGRGRGQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRSGSRSSRSWSRS 1080

Query: 1101 RSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRED 1160
            RSRSRSRSWSRRYSRSRSRSHDNHERS EKNFDRKDD+PPESVT TSPGTRKNA+EIRED
Sbjct: 1081 RSRSRSRSWSRRYSRSRSRSHDNHERSHEKNFDRKDDIPPESVTATSPGTRKNAIEIRED 1140

Query: 1161 GRQLPPADSN-IKPGNPENGADTNDQIVNAAAQVI 1175
            GRQLPPADSN IKPGNPENGADTNDQIVNAAAQVI
Sbjct: 1141 GRQLPPADSNNIKPGNPENGADTNDQIVNAAAQVI 1148

[Close]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL
Match: A0A6J1HMJ4 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464240 PE=4 SV=1)

HSP 1 Score: 1872 bits (4850), Expect = 0.0
Identity = 1016/1186 (85.67%), Postives = 1035/1186 (87.27%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPHPSASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHPSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMS QHIGQQQVMHQGQKMAHA
Sbjct: 121  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSLQHIGQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQN GQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNTGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSVQQNSQQQVQ+SPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSVQQNSQQQVQKSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG
Sbjct: 361  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPS APSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSAAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVE VPQMEKQRRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEFVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDRG LGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRGALGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAGGRGVI---VVAHRIGT---------------------IVWM--DV 1040
            GGFGGRGGMRDG  GGRG +   +   R G                      + W   D 
Sbjct: 961  GGFGGRGGMRDGGFGGRGGMRDGLAGGRGGRGDFFSGRGRGGRAFGGPPGGHVGWARGDR 1020

Query: 1041 GVDVDRVDLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVGSRSSRSWSRSRS 1100
            G   DR   +       G               G +   +       G   SRS SRSRS
Sbjct: 1021 GGPQDRYSSVDGRGRGRGQGRFDNRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSRSRS 1080

Query: 1101 RSRSR---SRSRSRSRSRSWSRRYSRSRSRSHDNHERSREKNFDRKDDVPPESVTVTSPG 1160
             SRS    SRSRSRSRSRSWSRRYSRSRSRSHDNHERS EKNFDRKDD+PPESVT TSPG
Sbjct: 1081 GSRSSRSWSRSRSRSRSRSWSRRYSRSRSRSHDNHERSHEKNFDRKDDIPPESVTATSPG 1140

Query: 1161 TRKNALEIREDGRQLPPADSN-IKPGNPENGADTNDQIVNAAAQVI 1175
            TRKNA+EIREDGRQLPPADSN IKPGNPENGADTNDQIVNAAAQVI
Sbjct: 1141 TRKNAIEIREDGRQLPPADSNNIKPGNPENGADTNDQIVNAAAQVI 1159

[Close]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL
Match: A0A6J1I960 (DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470797 PE=4 SV=1)

HSP 1 Score: 1818 bits (4708), Expect = 0.0
Identity = 993/1190 (83.45%), Postives = 1014/1190 (85.21%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPP LGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPYLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPH SASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHSSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVA QAIVNHHPSMQMAPDGRQHS+QPNQVLQQQGMFP+SSQHI QQQVMHQGQKMAHA
Sbjct: 121  SSVADQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPISSQHISQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQ PQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSV     QQVQQSPLGQPFGNHLEQKSAFQKREED IQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSV-----QQVQQSPLGQPFGNHLEQKSAFQKREEDKIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQ GSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQD RMSG
Sbjct: 361  QDPMGPAAMQEKQTGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPSVAP HPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSVAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMI+FRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEK RRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKHRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGG--- 980
            MAMRGGPSFGKDR  LGRFDAAMG SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGG   
Sbjct: 901  MAMRGGPSFGKDRSALGRFDAAMGDSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGARD 960

Query: 981  --------MRDGGFGGRGGMRDGLAGGRGV------------IVVAHRIGTIVWM--DVG 1040
                    MRDGGFGGRGGMRDGLAGGRG                    G + W   D G
Sbjct: 961  GGFGGRSGMRDGGFGGRGGMRDGLAGGRGGRGDFFSGRGRGRAFGGPPGGHVGWGRGDRG 1020

Query: 1041 VDVDRVDLITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEV------------GS 1100
               DR + +       G          ++F H             V             S
Sbjct: 1021 GPQDRYNSVDGRGRGRGQGRFD---NRRDFSHRSRGRSYSRSPERVRTWGYSRSRSRSSS 1080

Query: 1101 RSSRSWSRSRSRSRSRSRSRSRSRSRSWSRRYSRSRSRS----HDNHERSREKNFDRKDD 1160
            RSSRSWS+SRSRSRSRSR      SRSWSRRYSRSRSRS    HDNHERSREKNFDRKDD
Sbjct: 1081 RSSRSWSQSRSRSRSRSR------SRSWSRRYSRSRSRSRSRSHDNHERSREKNFDRKDD 1140

Query: 1161 VPPESVTVTSPGTRKNALEIREDGRQLPPADSN-IKPGNPENGADTNDQI 1167
            VPPESVT TSPGTRKNA E REDGRQLPPADSN I+PGNPENGADTNDQ+
Sbjct: 1141 VPPESVTATSPGTRKNAFETREDGRQLPPADSNNIEPGNPENGADTNDQL 1149

[Close]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL
Match: A0A6J1IAS8 (DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470797 PE=4 SV=1)

HSP 1 Score: 1812 bits (4694), Expect = 0.0
Identity = 986/1168 (84.42%), Postives = 1008/1168 (86.30%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPP LGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPYLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            LAPH SASTSKPTSIPEGHS PSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
Sbjct: 61   LAPHSSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSVA QAIVNHHPSMQMAPDGRQHS+QPNQVLQQQGMFP+SSQHI QQQVMHQGQKMAHA
Sbjct: 121  SSVADQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPISSQHISQQQVMHQGQKMAHA 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
            NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQ PQYMGYQQ
Sbjct: 181  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYMGYQQ 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
            SVHPSV     QQVQQSPLGQPFGNHLEQKSAFQKREED IQSGNQIGFSTSQFQQSGGT
Sbjct: 241  SVHPSV-----QQVQQSPLGQPFGNHLEQKSAFQKREEDKIQSGNQIGFSTSQFQQSGGT 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
            SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF
Sbjct: 301  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 360

Query: 381  QDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMSG 440
            QDPMGPAAMQEKQ GSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQD RMSG
Sbjct: 361  QDPMGPAAMQEKQTGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSG 420

Query: 441  VPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 500
            VPFPSVAP HPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR
Sbjct: 421  VPFPSVAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYR 480

Query: 501  QQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVT 560
            QQHEVTATGDNVPAPFMTFEATGFPPEILRE+       S    +  + WP      D+ 
Sbjct: 481  QQHEVTATGDNVPAPFMTFEATGFPPEILREI--YSAGFSSPTPIQAQTWPIALQGRDIV 540

Query: 561  EMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVL 620
             ++   +   +  L+P+FV                           RQCRNNPQNGPTVL
Sbjct: 541  AIAKTGSGKTLGYLIPAFVL-------------------------LRQCRNNPQNGPTVL 600

Query: 621  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 680
            VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI
Sbjct: 601  VLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDI 660

Query: 681  LEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 740
            LEMKMI+FRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN
Sbjct: 661  LEMKMIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAN 720

Query: 741  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKR 800
            DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEK RRLEQILRSQERGSKVIIFCSTKR
Sbjct: 721  DLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKHRRLEQILRSQERGSKVIIFCSTKR 780

Query: 801  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 860
            LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV
Sbjct: 781  LCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVV 840

Query: 861  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 920
            INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD
Sbjct: 841  INFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRD 900

Query: 921  MAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 980
            MAMRGGPSFGKDR  LGRFDAAMG SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD
Sbjct: 901  MAMRGGPSFGKDRSALGRFDAAMGDSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRD 960

Query: 981  GGFGGRGGMRDGLAG-GRGVIVVAHRIGTIVWM--DVGVDVDRVDLITEETSPIGVEAVV 1040
            G  GGRGG  D  +G GRG        G + W   D G   DR + +       G     
Sbjct: 961  GLAGGRGGRGDFFSGRGRGRAFGGPPGGHVGWGRGDRGGPQDRYNSVDGRGRGRGQGRFD 1020

Query: 1041 IVVALKEFEHGVTAEVAVAVTAEV------------GSRSSRSWSRSRSRSRSRSRSRSR 1100
                 ++F H             V             SRSSRSWS+SRSRSRSRSR    
Sbjct: 1021 ---NRRDFSHRSRGRSYSRSPERVRTWGYSRSRSRSSSRSSRSWSQSRSRSRSRSR---- 1080

Query: 1101 SRSRSWSRRYSRSRSRS----HDNHERSREKNFDRKDDVPPESVTVTSPGTRKNALEIRE 1160
              SRSWSRRYSRSRSRS    HDNHERSREKNFDRKDDVPPESVT TSPGTRKNA E RE
Sbjct: 1081 --SRSWSRRYSRSRSRSRSRSHDNHERSREKNFDRKDDVPPESVTATSPGTRKNAFETRE 1127

Query: 1161 DGRQLPPADSN-IKPGNPENGADTNDQI 1167
            DGRQLPPADSN I+PGNPENGADTNDQ+
Sbjct: 1141 DGRQLPPADSNNIEPGNPENGADTNDQL 1127

[Close]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL
Match: A0A6J1C7W7 (DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC111009186 PE=4 SV=1)

HSP 1 Score: 1714 bits (4440), Expect = 0.0
Identity = 935/1187 (78.77%), Postives = 994/1187 (83.74%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1    METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
            L PHPSASTSKP SIPE HS P+NGTLTPH Q NHHVPQQEGQSNSQLSQQPGHL+SQQH
Sbjct: 61   LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
            SSV G   VNHHP MQMAPDGRQHS QPNQV+QQ GMF MSSQH+GQQ VM Q QKMAH 
Sbjct: 121  SSVTGHVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQSQKMAHK 180

Query: 201  NQQISQHP-NQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQ 260
            NQQ++QHP NQQ LQNPGQQIPQPSIQ+LGQPNMQNQTPLVGQPQGPQYGQQ  QYMGYQ
Sbjct: 181  NQQMAQHPPNQQVLQNPGQQIPQPSIQNLGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ 240

Query: 261  QSVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGG 320
            QSVHPSVQQNSQQQV+QSPLGQPF NHLEQKS F  REEDN+QSGNQ+GFS+SQFQQSGG
Sbjct: 241  QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG 300

Query: 321  TSSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSR 380
            TSSIH++HPGTNSSQMQQ+GL +DQAR FGGSPGN+QQ H VVQLQH+GTELTHRQHHSR
Sbjct: 301  TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNLQQQHSVVQLQHAGTELTHRQHHSR 360

Query: 381  FQDPMGPAAMQEKQAGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDARMS 440
            FQD MGPA MQ +QAG+ENLPGRAGNE++FGRNEGPG GPHQPRLAAIPMARSQQ+ RM 
Sbjct: 361  FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG 420

Query: 441  GVPFPSVAPSHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVY 500
            GVPFPSVAP HPSGT+FAAG SH+MY+HGSGGPSL NNAL+GPPH+ ASDVTNMSPVEVY
Sbjct: 421  GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVVASDVTNMSPVEVY 480

Query: 501  RQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDV 560
            RQQHEVTATGDNVPAPFMTFEATGFPPE+LRE+       S    +  + WP      D+
Sbjct: 481  RQQHEVTATGDNVPAPFMTFEATGFPPELLREI--YSAGFSSPTPIQAQTWPIALQGRDI 540

Query: 561  TEMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTV 620
              ++   +   +  L+P+F+                           RQCRNNPQNGPTV
Sbjct: 541  VAIAKTGSGKTLGYLIPAFIL-------------------------LRQCRNNPQNGPTV 600

Query: 621  LVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLND 680
            LVLAPTRELATQIQDEAIKFGR+SR+CCTCLYGGAPKGPQLKELDRGADIVVATPGRLND
Sbjct: 601  LVLAPTRELATQIQDEAIKFGRSSRVCCTCLYGGAPKGPQLKELDRGADIVVATPGRLND 660

Query: 681  ILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA 740
            ILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA
Sbjct: 661  ILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA 720

Query: 741  NDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTK 800
            NDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTK
Sbjct: 721  NDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTK 780

Query: 801  RLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRV 860
            RLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRV
Sbjct: 781  RLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRV 840

Query: 861  VINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELR 920
            VIN+DFPTGIEDYVHRIGRTGRAGATG+AYTFF EQDWKYAADLIKVLEGADQ VPPELR
Sbjct: 841  VINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFSEQDWKYAADLIKVLEGADQHVPPELR 900

Query: 921  DMAMRGGPSFGKDRGGLGRFDAAMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMR 980
            DMAMRGGPSFGKDRGG+GRFDA MGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMR
Sbjct: 901  DMAMRGGPSFGKDRGGMGRFDAGMGGSRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMR 960

Query: 981  DGGFGGRGGMRDGLA----GGRGVIVVAHRI----------GTIVWM--DVGVDVDRVDL 1040
            DGGFGGRG MRDG A    GGRG                  G + W   D G   DR + 
Sbjct: 961  DGGFGGRGNMRDGGAAGGRGGRGDFFPGRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNS 1020

Query: 1041 ITEETSPIGVEAVVIVVALKEFEHGVTAEVAVAVTAEVG-----------SRSSRSWSRS 1100
            +       G               G +   +       G           SRSSRSWSRS
Sbjct: 1021 VDGRGRGRGQGRFDSRRDFSNRSRGRSYSRSPERVRTWGYSRSRSRSGSHSRSSRSWSRS 1080

Query: 1101 RSRSRSRSRSRSRSRSRSWSRRYSRSRSRS--HDNHERSREKNFDRKDDVPP-ESVTVTS 1160
            RSRSRSRSRSRSR+RSRSWSRRYSRSRSRS  HDNHERSRE NFDRKDD+PP ESVT +S
Sbjct: 1081 RSRSRSRSRSRSRTRSRSWSRRYSRSRSRSRNHDNHERSRESNFDRKDDLPPPESVTASS 1140

Query: 1161 PGTRKNALEIREDGRQLPPA----DSNIKPGNPENGADTNDQIVNAA 1171
            PGT+K+A E R+D RQ PPA    ++NI+PGNPENGAD +DQIVNAA
Sbjct: 1141 PGTQKSAFEERDDARQFPPASGIGNNNIEPGNPENGADMSDQIVNAA 1160

[Close]

BLAST of Csor.00g251480 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 804.7 bits (2077), Expect = 1.0e-232
Identity = 570/1139 (50.04%), Postives = 677/1139 (59.44%), Query Frame = 0


Query: 21   METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP 80
            M T E  P S GPRYAP+DPTLP+PWKGLIDGSTG+LYYWNPETNVTQYE+P S PPP  
Sbjct: 1    MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPP-- 60

Query: 81   LAPHPSASTSKPTSIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH 140
                 SA+T K   IP     PS+G       Q H    ++ +    +SQQ G    QQ 
Sbjct: 61   ----HSATTPKLAQIP----VPSSG-------QGHQAQHEQAKPVGHVSQQHGF---QQ- 120

Query: 141  SSVAGQAIVNHHPSMQMAPDGRQHSLQPNQVLQQQGMFPMSSQHIGQQQVMHQGQKMAHA 200
                                      QP Q   Q     M  QH  QQ     GQ+    
Sbjct: 121  --------------------------QPQQFPSQHVRPQMMQQHPAQQMPQQSGQQFP-- 180

Query: 201  NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQHPQYMGYQQ 260
             QQ SQ     P  +P  Q  QP+ Q   Q  MQNQ   + Q    QY      YMG++ 
Sbjct: 181  -QQQSQSMVPHPHGHPSVQTYQPTTQQ-QQQGMQNQHSQMPQQLSHQYAHSQQHYMGFRP 240

Query: 261  SVHPSVQQNSQQQVQQSPLGQPFGNHLEQKSAFQKREEDNIQSGNQIGFSTSQFQQSGGT 320
             +     QNS Q  Q  P GQ F +  E  S   KRE D    G + GFS      S  +
Sbjct: 241  HMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTGFSQPHLPNSERS 300

Query: 321  SSIHSVHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRF 380
             S ++      +SQ     L    A++  G   N      V Q Q  G  L H+Q   R 
Sbjct: 301  PSQNTHFEANAASQKTNANLA--MAQKCNGPQANA----AVTQFQQPGANLIHQQLGPRA 360

Query: 381  QDPMGPAAMQEKQAGS---------ENLPGRAGNE-YFFGRNEGPGIGPHQPRLAAIPMA 440
             + M    + +K   S          NL  R GN+ Y   R E P  G      AA+P  
Sbjct: 361  PNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQPLHPAAMP-- 420

Query: 441  RSQQDARMSGVPFPSVAPSHPSGTSFAAGQS-HNMYNHGSGGPSLSNNALMGPPHIGASD 500
               +D R+SG P        P+    A GQ+ H  Y H   GP+  N +L+ P  + + D
Sbjct: 421  ---KDIRISGGP--------PTNADPAMGQTGHGTYGH--AGPAFPNKSLVRPHFVTSPD 480

Query: 501  VTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFPPEILREVRYLLRRRSICRNLLVEC 560
            V ++SPVE+YR+QHEVT TG+N+PAP++TFE++G PPEILRE+  L         +  + 
Sbjct: 481  VPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILREL--LSAGFPSPTPIQAQT 540

Query: 561  WPFDQITPDVTEMSCLLALLNMS-LLPSFVASSCFYIYCWFLISHANSSTNMADCPARQC 620
            WP    + D+  ++   +   +  L+P+F+                           R C
Sbjct: 541  WPIALQSRDIVAIAKTGSGKTLGYLIPAFIL-------------------------LRHC 600

Query: 621  RNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYGGAPKGPQLKELDRGADI 680
            RN+ +NGPTVL+LAPTRELATQIQDEA++FGR+SRI CTCLYGGAPKGPQLKEL+RGADI
Sbjct: 601  RNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADI 660

Query: 681  VVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 740
            VVATPGRLNDILEMKMI+F+QVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA
Sbjct: 661  VVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 720

Query: 741  TWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERG 800
            TWPKEVRKIA+DLLVN VQVNIG VDELAANKAITQYVEVVPQMEK+RRLEQILRSQERG
Sbjct: 721  TWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERG 780

Query: 801  SKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLNQFRSGKSPILVATDVAA 860
            SKVIIFCSTKRLCD LAR++GR FGA  IHGDK+QGERDWVLNQFRSGKS +L+ATDVAA
Sbjct: 781  SKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 840

Query: 861  RGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFFCEQDWKYAADLIKVLEG 920
            RGLDIKDIRVVIN+DFPTG+EDYVHRIGRTGRAGATG+A+TFF EQDWKYA DLIKVLEG
Sbjct: 841  RGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEG 900

Query: 921  ADQLVPPELRDMAMR----GGPSFGKDRGGL-GRFDAAMGGSRWDSGGRGGMRDGGFGGR 980
            A+Q VPP++RD+AMR    GGP + +DR G+  RFD+  GG+RWDSGG  G R GGF GR
Sbjct: 901  ANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDSGGGGTRWDSGGGFGGRGGGFSGR 960

Query: 981  G---GARDGGFGGRGGMRDGGFGGRG---GMRD---GLAGGRGVIVVAHRIGTIVWMDVG 1040
                G R+GGFGG    R+GGFGGRG   GMRD   G  G RG        G +     G
Sbjct: 961  EGGFGGREGGFGG----REGGFGGRGGRFGMRDDSFGRGGNRGRGFTGPDAGHMNVGGRG 1020

Query: 1041 VDVDRVDLITEETSPIGVEAVVIVVALKEFEHGV-----TAEVAVAVTAEVGSRSSRSWS 1100
                  +    E+   G  +       + F  GV         + + + ++     RS S
Sbjct: 1021 GFGRFGNNNNMESRGFGRGSG------RGFGRGVGRFDNRRGRSRSRSPDLVRPRRRSSS 1029

Query: 1101 RSRSRSRSRSRSRSRSRSRSWSRRYSRS--RSRSHDNHERSREKN------FDRKDDVP 1121
             SRSRSRS S SRSRSRSRSWSR  SRS   SR    H RSR  +      ++R+D  P
Sbjct: 1081 YSRSRSRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRSYSRSPSPVYERRDRAP 1029

[Close]

BLAST of Csor.00g251480 vs. TAIR 10
Match: AT5G14610.2 (DEAD box RNA helicase family protein )

HSP 1 Score: 564.7 bits (1454), Expect = 1.7e-160
Identity = 336/593 (56.66%), Postives = 405/593 (68.30%), Query Frame = 0


Query: 422 PRLAAIPMARSQQDARMSGVPF-----------PSVAPSHPSGTSF-AAGQ----SHNMY 481
           P+LAAIP++ S Q  + S   F            S  P   SG+ F  AG+    S N  
Sbjct: 53  PKLAAIPVSSSVQTNQQSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDA 112

Query: 482 NHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAPFMTFEATGFP 541
             G G  S   ++  GPP   A +   +SP E Y ++HE+T +G  VP P M+FEATG P
Sbjct: 113 ASGLGNASSGGSSARGPPSSAAGN--ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLP 172

Query: 542 PEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMS-LLPSFVASSCFY 601
            E+LREV       S    +  + WP      D+  ++   +   +  L+P F+      
Sbjct: 173 NELLREV--YSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM------ 232

Query: 602 IYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRI 661
                                ++  N+ + GPT+LVL+PTRELATQIQ EA+KFG++S+I
Sbjct: 233 -------------------HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKI 292

Query: 662 CCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDM 721
            C CLYGGAPKGPQLKE++RG DIVVATPGRLNDILEMK I+  QVS LVLDEADRMLDM
Sbjct: 293 SCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDM 352

Query: 722 GFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQ 781
           GFEPQIRKIVNE+P +RQTLMYTATWPKEVRKIA DLLVN  QVNIG+VDEL ANK+ITQ
Sbjct: 353 GFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQ 412

Query: 782 YVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQG 841
            +EV+  MEK  RLEQILRSQE GSK+IIFCSTKR+CDQLARNL R FGAAAIHGDKSQ 
Sbjct: 413 TIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQA 472

Query: 842 ERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGAT 901
           ERD VLNQFRSG++P+LVATDVAARGLD+KDIRVV+N+DFP G+EDYVHRIGRTGRAGAT
Sbjct: 473 ERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGAT 532

Query: 902 GMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGLGRFDAAMGG 961
           G+AYTFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+ +F      
Sbjct: 533 GLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRGG-------GGMNKFRRWGTP 592

Query: 962 SRWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGGMRDGLAGGRG 998
           S    GGRGG  D G+GGRG   + G+G RG   D G+GGRG      +GGRG
Sbjct: 593 SSGGGGGRGGYGDSGYGGRG---ESGYGSRG---DSGYGGRGD-----SGGRG 597

HSP 2 Score: 73.9 bits (180), Expect = 9.4e-13
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLPLAPHPSASTSKPT 93
           RYAP+DP LPKPWKGL+D  TG LY+WNPETNVTQYE+P S  PP  LA  P +S+ +  
Sbjct: 9   RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP-KLAAIPVSSSVQTN 68

Query: 94  SIPEGHSTPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQHSSVAGQA 148
              +  S  ++G       +    P+ +  S    + + G + S   +S  G A
Sbjct: 69  Q--QSSSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNA 119

[Close]

BLAST of Csor.00g251480 vs. TAIR 10
Match: AT3G01540.1 (DEAD box RNA helicase 1 )

HSP 1 Score: 557.4 bits (1435), Expect = 2.8e-158
Identity = 317/528 (60.04%), Postives = 382/528 (72.35%), Query Frame = 0


Query: 459 GQSHNMYNHGSG---GPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAP 518
           G+S   Y++G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 519 FMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLP 578
            M+FEATGFPPE+LREV  L    S    +  + WP      D+           +++  
Sbjct: 158 LMSFEATGFPPELLREV--LSAGFSAPTPIQAQSWPIAMQGRDI-----------VAIAK 217

Query: 579 SFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEA 638
           +    +  Y+   FL               ++ RN+ + GPT+LVL+PTRELATQIQ+EA
Sbjct: 218 TGSGKTLGYLIPGFL-------------HLQRIRNDSRMGPTILVLSPTRELATQIQEEA 277

Query: 639 IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 698
           +KFGR+SRI CTCLYGGAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVL
Sbjct: 278 VKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVL 337

Query: 699 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 758
           DEADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDE
Sbjct: 338 DEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDE 397

Query: 759 LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 818
           L ANK+ITQ++EVV  MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAA
Sbjct: 398 LVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 457

Query: 819 AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 878
           AIHGDKSQ ERD VLNQFRSG++P+LVATDVAARGLD+KDIR V+N+DFP G+EDYVHRI
Sbjct: 458 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 517

Query: 879 GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGL 938
           GRTGRAGATG A+TFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+
Sbjct: 518 GRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGM 577

Query: 939 GRFDAAMGGSRW--DSGGRGGMRDGGFGGRG--GARDGGFGGRGGMRD 980
            +F      SRW   SGGRG   D G+GGRG   +RD    G G  R+
Sbjct: 578 NKF------SRWGPPSGGRGRGGDSGYGGRGSFASRDRSSNGWGRERE 585

HSP 2 Score: 80.9 bits (198), Expect = 7.7e-15
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLAPHPSASTSKP 93
           RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP    +P  S S+S  
Sbjct: 11  RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 94  TSIPEGHSTPSN 105
               + ++ P +
Sbjct: 71  VQQTDAYAPPKD 80

[Close]

BLAST of Csor.00g251480 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 555.8 bits (1431), Expect = 8.1e-158
Identity = 316/530 (59.62%), Postives = 380/530 (71.70%), Query Frame = 0


Query: 459 GQSHNMYNHGSG---GPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAP 518
           G+S   Y++G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 519 FMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLP 578
            M+FEATGFPPE+LREV  L    S    +  + WP      D+           +++  
Sbjct: 158 LMSFEATGFPPELLREV--LSAGFSAPTPIQAQSWPIAMQGRDI-----------VAIAK 217

Query: 579 SFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEA 638
           +    +  Y+   FL               ++ RN+ + GPT+LVL+PTRELATQIQ+EA
Sbjct: 218 TGSGKTLGYLIPGFL-------------HLQRIRNDSRMGPTILVLSPTRELATQIQEEA 277

Query: 639 IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 698
           +KFGR+SRI CTCLYGGAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVL
Sbjct: 278 VKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVL 337

Query: 699 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 758
           DEADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDE
Sbjct: 338 DEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDE 397

Query: 759 LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 818
           L ANK+ITQ++EVV  MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAA
Sbjct: 398 LVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 457

Query: 819 AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 878
           AIHGDKSQ ERD VLNQFRSG++P+LVATDVAARGLD+KDIR V+N+DFP G+EDYVHRI
Sbjct: 458 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 517

Query: 879 GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGL 938
           GRTGRAGATG A+TFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+
Sbjct: 518 GRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGM 577

Query: 939 GRFDAAMGGSRW--DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 984
            +F      SRW   SGGRG   D G+GGR     G F  R      G+G
Sbjct: 578 NKF------SRWGPPSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 80.9 bits (198), Expect = 7.7e-15
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLAPHPSASTSKP 93
           RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP    +P  S S+S  
Sbjct: 11  RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 94  TSIPEGHSTPSN 105
               + ++ P +
Sbjct: 71  VQQTDAYAPPKD 80

[Close]

BLAST of Csor.00g251480 vs. TAIR 10
Match: AT3G01540.3 (DEAD box RNA helicase 1 )

HSP 1 Score: 555.8 bits (1431), Expect = 8.1e-158
Identity = 316/530 (59.62%), Postives = 380/530 (71.70%), Query Frame = 0


Query: 459 GQSHNMYNHGSG---GPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEVTATGDNVPAP 518
           G+S   Y++G+    G S    A    P   ++  + +SP E Y ++HE+T +G  VP P
Sbjct: 98  GRSGPPYSNGAANGVGDSAYGAASTRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPP 157

Query: 519 FMTFEATGFPPEILREVRYLLRRRSICRNLLVECWPFDQITPDVTEMSCLLALLNMSLLP 578
            M+FEATGFPPE+LREV  L    S    +  + WP      D+           +++  
Sbjct: 158 LMSFEATGFPPELLREV--LSAGFSAPTPIQAQSWPIAMQGRDI-----------VAIAK 217

Query: 579 SFVASSCFYIYCWFLISHANSSTNMADCPARQCRNNPQNGPTVLVLAPTRELATQIQDEA 638
           +    +  Y+   FL               ++ RN+ + GPT+LVL+PTRELATQIQ+EA
Sbjct: 218 TGSGKTLGYLIPGFL-------------HLQRIRNDSRMGPTILVLSPTRELATQIQEEA 277

Query: 639 IKFGRASRICCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVL 698
           +KFGR+SRI CTCLYGGAPKGPQL++L+RGADIVVATPGRLNDILEM+ I+ RQ+S LVL
Sbjct: 278 VKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVL 337

Query: 699 DEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDE 758
           DEADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA DLLVN  QVNIG+VDE
Sbjct: 338 DEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDE 397

Query: 759 LAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAA 818
           L ANK+ITQ++EVV  MEKQRRLEQILRSQE GSKVIIFCSTKR+CDQL RNL R FGAA
Sbjct: 398 LVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAA 457

Query: 819 AIHGDKSQGERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRI 878
           AIHGDKSQ ERD VLNQFRSG++P+LVATDVAARGLD+KDIR V+N+DFP G+EDYVHRI
Sbjct: 458 AIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRI 517

Query: 879 GRTGRAGATGMAYTFFCEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRGGL 938
           GRTGRAGATG A+TFF +QD K+A+DLIK+LEGA+Q VPP++R+MA RGG       GG+
Sbjct: 518 GRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG-------GGM 577

Query: 939 GRFDAAMGGSRW--DSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFG 984
            +F      SRW   SGGRG   D G+GGR     G F  R      G+G
Sbjct: 578 NKF------SRWGPPSGGRGRGGDSGYGGR-----GSFASRDSRSSNGWG 582

HSP 2 Score: 80.9 bits (198), Expect = 7.7e-15
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 34  RYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPV-SLPPPLPLAPHPSASTSKP 93
           RYAP+D TLPKPWKGLID  TG LY+WNPETNVTQYEKP  SLPP    +P  S S+S  
Sbjct: 11  RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLPP--KFSPAVSVSSSVQ 70

Query: 94  TSIPEGHSTPSN 105
               + ++ P +
Sbjct: 71  VQQTDAYAPPKD 80

The following BLAST results are available for this feature:

BLAST of Csor.00g251480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQV1	1.4e-231	50.04	DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 P...	[more]
Q9LYJ9	2.5e-159	56.66	DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 P...	[more]
Q8H136	1.1e-156	59.62	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 P...	[more]
P46942	5.0e-152	57.07	ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=...	[more]
Q5JKF2	4.7e-150	55.81	DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Csor.00g251480 vs. NCBI nr


Match Name	Identity	Description
KAG6597587.1	100.00	DEAD-box ATP-dependent RNA helicase 46, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022964311.1	86.55	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 [Cucurbita moschata]	[more]
XP_022964154.1	85.67	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_023539269.1	85.47	DEAD-box ATP-dependent RNA helicase 40-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022972187.1	83.45	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 [Cucurbita maxima] >XP_02...	[more]

BLAST of Csor.00g251480 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HIK1	86.55	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HMJ4	85.67	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1I960	83.45	DEAD-box ATP-dependent RNA helicase 40-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1IAS8	84.42	DEAD-box ATP-dependent RNA helicase 40-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1C7W7	78.77	DEAD-box ATP-dependent RNA helicase 46 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Csor.00g251480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06480.1	1.0e-232	50.04	DEAD box RNA helicase family protein	[more]
AT5G14610.2	1.7e-160	56.66	DEAD box RNA helicase family protein	[more]
AT3G01540.1	2.8e-158	60.04	DEAD box RNA helicase 1	[more]
AT3G01540.2	8.1e-158	59.62	DEAD box RNA helicase 1	[more]
AT3G01540.3	8.1e-158	59.62	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 41..74 e-value: 6.7E-7 score: 38.9
IPR001202	WW domain	PFAM	PF00397	WW	coord: 42..72 e-value: 1.7E-6 score: 28.0
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 46..72
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 40..74 score: 11.270201
IPR001202	WW domain	CDD	cd00201	WW	coord: 43..71 e-value: 0.00577068 score: 33.6554
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 798..882 e-value: 4.6E-36 score: 135.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 774..882 e-value: 2.0E-32 score: 111.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 777..921 score: 25.571613
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 553..765 e-value: 1.4E-33 score: 127.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 614..748 score: 23.612024
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 752..924 e-value: 1.4E-59 score: 202.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 582..751 e-value: 6.3E-54 score: 184.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 614..899
None	No IPR available	GENE3D	2.20.70.10		coord: 36..74 e-value: 2.3E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1060..1175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1096..1121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1069..1095
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 952..982
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1156..1175
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 606..1014
None	No IPR available	PANTHER	PTHR47958:SF66	DEAD-BOX ATP-DEPENDENT RNA HELICASE 40	coord: 313..533 coord: 606..1014
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 313..533
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 762..891 e-value: 9.94566E-63 score: 207.36
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 604..737 e-value: 2.8E-34 score: 118.4
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 694..702
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 37..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g251480.m01	Csor.00g251480.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003724	RNA helicase activity