
Csor.00g251020 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGCATCCTTGTGTGCACACAAGGTGTTTGTATAAATGCTTGCTTAGTGACTTTTTTCTGCAAGATCAGTGTTCATCTGTTCCTTTTGATTTCATATTGGTTATAGTCTTTTATGAAAGGGATTGATTGTTAATTGTTGATTGTTGATTGTTGATTGCAGTGGAGTTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCAACTCTGGTGGAGGATAGTAAACCACTTGATGAAAACGAAACAGGTGTAAGTTCGATCGAAAGGATTTTCGATCACGACCAGGATGAGAAAATCATTCAAGATTCATCTGGAAGGAATGCCATTCTAGATTCAGTTCCTGGATTGCCAGTAGTTCAAGGAGATGAGCCATATATTGGCCAGGAATTTGAAAATGAGGCAGCAGCTCATGCGTTTTATAATGCTTATGCTACTCGTGTCGGTTTTGTGATTCGTGTTAGCAAGCTCTCGCGATCGAGACGTGATGGAACGGCTATTGGACGTGCACTAGTCTGCAACAAGGAAGGTTACAGAATGCCGGACAAGCGGGAAAAGATCGTGAGGCAAAGGGCCGAGACGAGGGTAGGCTGCAGGGCAATGATCTTGGTGAGGAAAATAACTTCTGGGAAATGGGTTGTCACTAAATTTGTAAAAGAACATACTCATCCTTTGTCACCTGGGAAAAGTCGAAGAGATTGCATATATGATCAATACCCGGTAAGTTCTTGTTCCACATACCATTATTTGCATACTCAATTCCTGACACTGTTATACATGTTGTTCTGATTGTAGTCTGGCGTGCATTAGTTGTAAATTGGATTATCTTGGAATGAATCATCTGGCTTTTTCCGAATAAGCTTTCTCCAGCAAGTTTGAGTTAAAGAAGTAAAATGGACAATGCAGCTATTTGAAACTGGTATTTTATCTATCTTTGTTGCTTTATTTGAGGCTAGGTGCACTTACCTAGACATCCTACATCCTCTACCCTCCCTCGAGGTGTGTACGCACATGAACACAAAAATGTTGTATTTAACCAAACATGTTTTCGAGATGTAGGCTTCTTAGTTACGGAAATTGGTCTACTTTGACAAAGGAAAGTCACCGAGCCTATTGTGTCGATGCCCGTTGAACAGACTCTAACTAAAATTGTGTACGTAAAGCGATAGATCAAACATATGGGCTTGTCTTGTGTTGTGCTTCTATCAATGATATCTTCTTTTCTGTTGTTTGATTGGCACTATAGGAAAATATGTGGAATTCAGAAAGAATATACGAGTGGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAAAGTGTGGAAACCTCTCCCTAATAGACATGTTTAAAAACCTTGAAGGGAAACCCAAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAACGGTGGCCTCGGGCTGTTACAATTGATATTAGAGCCAGACATTGGGCAGTGTGCCAGTGAGGACGTAGGGCCCCCAAGGGGGGTGGATTATGAGATCCCACATCGGTTGGAGAGGGAAATGAAACATTCCTCATAAGGGTGTGGAAACCTCTCCCTAATATACGTGTTTTAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCTCAAAGAGAATAATATCTGCTATAGTGGTGACTTCGGGCTGATACTATGAACGAACTTGGCATTATGGATTAGAGTGCACATTTCGTTAATACATTGAGAGTAAGGGTCATGTCTCTTCCCTCTTGAAATTGAGCTGGACATCTATGTTTAGTATGCTTTTTTATAAAGAAAATGATCGGTGGCCATTCTTCCACTTTTTCTTGCTTTCATATACCTTGACTAGGTTCGAATCTCCATTCTCCCACGTGTGTTTCTGTTGAACTCGAAAAGGTTGTTTATCGATTCCAGTTGATTTTTTTATGTCTTATTTGTTGCATAACTTGCCACAAAGAGGGCACTCTTGATCTTACCTTCTCTAAATAGTTTATCTGATATGTTAGATCTCTGATCTCGGTCTCTTTGATTAGTGTGTATCTTGCCAGTTTTGGTCCACTCTGCTGGTACATTTAACATGACATAGAAATTGATCTATCCTCTATAGGAGAGTGACTCAAGGAGAGGGTAGATTTTCTTTGTTCCAAGCGAGAAAGAAAGTCATAGGCACGTAGGTTCAGGGCCGGTTTGGGTCCCATTTGGATTCGTTGGCATTGGTTTCTAGCATATGCTTTTGACTCTGCTCGAACCATTTCTTCTCTATTCTTTGTTATAATACTTGAACAGTTGAGTGACTTTGTTTTTCATAGTCTTTTTTTGTGTACTTTTTTAGGCTTACTGTAATTGCCAATGCATATCTGGTTCTTTAACTCAACTTTTGCCATCCTTGCATTGCAGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTTGCAGTTGAGAAAAAGCGATCTGCAACGTATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAG ATGGCGTCGCATCCTTGTGTGCACACAAGGTTGGAGTTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCAACTCTGGTGGAGGATAGTAAACCACTTGATGAAAACGAAACAGGTGTAAGTTCGATCGAAAGGATTTTCGATCACGACCAGGATGAGAAAATCATTCAAGATTCATCTGGAAGGAATGCCATTCTAGATTCAGTTCCTGGATTGCCAGTAGTTCAAGGAGATGAGCCATATATTGGCCAGGAATTTGAAAATGAGGCAGCAGCTCATGCGTTTTATAATGCTTATGCTACTCGTGTCGGTTTTGTGATTCGTGTTAGCAAGCTCTCGCGATCGAGACGTGATGGAACGGCTATTGGACGTGCACTAGTCTGCAACAAGGAAGGTTACAGAATGCCGGACAAGCGGGAAAAGATCGTGAGGCAAAGGGCCGAGACGAGGGTAGGCTGCAGGGCAATGATCTTGGTGAGGAAAATAACTTCTGGGAAATGGGTTGTCACTAAATTTGTAAAAGAACATACTCATCCTTTGTCACCTGGGAAAAGTCGAAGAGATTGCATATATGATCAATACCCGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTTGCAGTTGAGAAAAAGCGATCTGCAACGTATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAG ATGGCGTCGCATCCTTGTGTGCACACAAGGTTGGAGTTTGGGGTTGATGGTGATAGTGAAGTGGTGGGAAATTCAACTCTGGTGGAGGATAGTAAACCACTTGATGAAAACGAAACAGGTGTAAGTTCGATCGAAAGGATTTTCGATCACGACCAGGATGAGAAAATCATTCAAGATTCATCTGGAAGGAATGCCATTCTAGATTCAGTTCCTGGATTGCCAGTAGTTCAAGGAGATGAGCCATATATTGGCCAGGAATTTGAAAATGAGGCAGCAGCTCATGCGTTTTATAATGCTTATGCTACTCGTGTCGGTTTTGTGATTCGTGTTAGCAAGCTCTCGCGATCGAGACGTGATGGAACGGCTATTGGACGTGCACTAGTCTGCAACAAGGAAGGTTACAGAATGCCGGACAAGCGGGAAAAGATCGTGAGGCAAAGGGCCGAGACGAGGGTAGGCTGCAGGGCAATGATCTTGGTGAGGAAAATAACTTCTGGGAAATGGGTTGTCACTAAATTTGTAAAAGAACATACTCATCCTTTGTCACCTGGGAAAAGTCGAAGAGATTGCATATATGATCAATACCCGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTTGCAGTTGAGAAAAAGCGATCTGCAACGTATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAG MASHPCVHTRLEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDHDQDEKIIQDSSGRNAILDSVPGLPVVQGDEPYIGQEFENEAAAHAFYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKITSGKWVVTKFVKEHTHPLSPGKSRRDCIYDQYPNEHDKIRELSQQLAVEKKRSATYKRHLEVIFEYIEEHNNNLSRKIQHIVDNVKEMESIEQQNHR Homology
BLAST of Csor.00g251020 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24 Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.3e-16 Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy Swiss-Prot
Match: Q9S793 (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 0
BLAST of Csor.00g251020 vs. NCBI nr
Match: KAG6597632.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 514 bits (1323), Expect = 1.38e-183 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of Csor.00g251020 vs. NCBI nr
Match: KAG7029074.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 491 bits (1263), Expect = 2.00e-174 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of Csor.00g251020 vs. NCBI nr
Match: XP_022932594.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucurbita moschata]) HSP 1 Score: 488 bits (1255), Expect = 2.22e-173 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Csor.00g251020 vs. NCBI nr
Match: XP_023540585.1 (protein FAR1-RELATED SEQUENCE 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488 bits (1255), Expect = 6.88e-173 Identity = 249/251 (99.20%), Postives = 250/251 (99.60%), Query Frame = 0
BLAST of Csor.00g251020 vs. NCBI nr
Match: XP_022972035.1 (protein FAR1-RELATED SEQUENCE 7-like [Cucurbita maxima]) HSP 1 Score: 482 bits (1240), Expect = 4.62e-171 Identity = 245/251 (97.61%), Postives = 249/251 (99.20%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy TrEMBL
Match: A0A6J1EXF3 (protein FAR1-RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111439106 PE=4 SV=1) HSP 1 Score: 488 bits (1255), Expect = 1.07e-173 Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy TrEMBL
Match: A0A6J1I7E4 (protein FAR1-RELATED SEQUENCE 7-like OS=Cucurbita maxima OX=3661 GN=LOC111470688 PE=4 SV=1) HSP 1 Score: 482 bits (1240), Expect = 2.23e-171 Identity = 245/251 (97.61%), Postives = 249/251 (99.20%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy TrEMBL
Match: A0A6J1C8X6 (protein FAR1-RELATED SEQUENCE 6 OS=Momordica charantia OX=3673 GN=LOC111009466 PE=4 SV=1) HSP 1 Score: 473 bits (1218), Expect = 4.69e-168 Identity = 238/250 (95.20%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy TrEMBL
Match: A0A1S3BY81 (protein FAR1-RELATED SEQUENCE 6 OS=Cucumis melo OX=3656 GN=LOC103494508 PE=4 SV=1) HSP 1 Score: 473 bits (1216), Expect = 9.46e-168 Identity = 236/250 (94.40%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of Csor.00g251020 vs. ExPASy TrEMBL
Match: A0A0A0KZ37 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017090 PE=4 SV=1) HSP 1 Score: 473 bits (1217), Expect = 1.38e-167 Identity = 236/250 (94.40%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of Csor.00g251020 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 302.0 bits (772), Expect = 4.7e-82 Identity = 154/235 (65.53%), Postives = 187/235 (79.57%), Query Frame = 0
BLAST of Csor.00g251020 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 302.0 bits (772), Expect = 4.7e-82 Identity = 154/235 (65.53%), Postives = 187/235 (79.57%), Query Frame = 0
BLAST of Csor.00g251020 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.4e-38 Identity = 89/207 (43.00%), Postives = 137/207 (66.18%), Query Frame = 0
BLAST of Csor.00g251020 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 135.2 bits (339), Expect = 7.6e-32 Identity = 78/181 (43.09%), Postives = 114/181 (62.98%), Query Frame = 0
BLAST of Csor.00g251020 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28 Identity = 68/175 (38.86%), Postives = 106/175 (60.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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