
Csor.00g250160 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGCAGGGAAAGGATACAAGCATGTCCAACATTTCAGAAAATGAGCAGTGTGAGACGGACATTAGGGGATCCGAGGAGATGGAATCCAATATAGCTCGCCTACTAGAAAAGATTGAAAGCTTCACACAACTGGTAGGTGGTGGCTATGACCAATCCTTTTGAGCTGGAAATATGAGCTCGGTGTTTGGAGTGGGACCAAAATCCCAGATCGACTAGATATAAGAAAGATCACGAGTATATAAATGAGAGACATTATATCAGATTTTTTTTGGGTGAAATCAAAAGTAGAGTCACATGGGCTAATGTCCTAAATTATAGGATATTATATGAAGATGGAAATATGTGTGGAAATATGTGAAGGGAAGTAGCTAGAACTTGGGTTATATTGCAATAGTATGTATTGTTTTCAAGTTTTTGTTTGGCTGCAAATATTTTCTACTGATCCACATTAATTTTTTCTTAATGAAGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGCTTTTAAAGATCTTAGTAATGAATTTGAAGAGCAAATCATAGCGTGAGTTGAAACTAGAATATATACCTTCAAACATTTTTGTTGAGAACTACTTTATTAACTTATTTACTGTTCTTTCTTTCATTCTTTCCAGCATTCACAAGAATAATGTTGAAAGATGGCAACACGAGATCAAAGAGCTGCGGTTGCTTGATTCATCAAATGAGGAAGCCAGTACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGGTCACATCCAGTTTTGAAGGTAATTTCAAACAGGGCTATTCTTTTTTTCCAGCTGTGGAAAATTGATTCGAACCATGATTGAAAAGCTAGGCTAGAAGAGGTGTCTACATCAAGGAAGCAACTTAGTTCCATGAAACCTAGTAGAAAAGTTCTATATTTAGTTTTAACGAATAACCATGCATGCTCATTTTTATCTTTAAACTTCTATCAAAATCATGCATATATCAAAACTGTGAAACAATTGAGATACTAACTGAGTTGTGTATTTGCTTGGTTTTGTGTGTTTTAGGCGAAGATGGAAAATCATGTAGTTAAAAATTGTAACCCTGACAAACTGTTCTAAAGAATATTATATCCTTAGTACTGAGGTGGGAGGTGGGGATCCAAATTTAAGATGTCTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTAATAGAGAATGCCATGATCCAAGAGTAAGAGAGGTTGAATAGAGATTTGAAAATTTAACTTTCGGGATACATGTATAATATAAAATTGACAATTGAAGTGGTTTGTGATACATAATCTTGATATTTTAACCCTAAATCTAAATACCTTGTATAAGAGATTGTATGTATGGAAAATACTTGATATTTACAAATCAAGCAAACAAAAATCCTAATATTTTTATATGTTATTTTATAGTATATGTATTTTTTACTCCTAAATAAATTATTATACATATTATATACCCTAATTGTAGTATATATGCTGTAAAATGTGTGGAGTGAACTTAATATATATAGAACTATTACATATAGTCGGGAGAAAGTGAGTGGAACTTTATTGACATGTATCATTGACTAAGATATTACAATTATGAATCACCGATTTTCAAATGTTAAAACTAAAAATTATCGATTTTTTTACTACTTTTTATGAATTTTTAAAGATAAAAATAATTAAAATAAAGTTATTTTTATATTGATTTTATTTGTTAAGCTTTGTACTTTTGAAAGATATCAAATTACCGACTTTTATATGATATTTGATATAGAAGTTATGGAGGTACCATGCATGCATTTAAAATAGTAAAATTATCAACCACCAAAATTCAAGAATATAAAATATGTTAAGAAATGTTAAAAAAATACATTAAGGTAGTGATTCATTTAGTATATAACAATTTTGTAGCATTTTAGTCTATGAAGTGAAAACCTTCCCTCATTTCCTTAGTACAATGAAATTACATCATTATAGCTCAACTTCACTTCTAAATTTGTCGATAAGATATATTCGTAAACTTTTTAATTTTATCAAATTACTCCTTAAGTTTGAACAAATGTTTCATTTTTTTTTACCTTCGATTTAGTTTTGATTGAAGAATTATTACCAAAAATTCGTAAAATCAAATATTAGAGAATAATTTTGGATATGAAAAATGATTTTGAGCAATCAAAATTACTTTAAACACATAAAGATTAATAGTACCTTAATTGTCATCTTGAACTCTAAAAACTAAATTGAAGTAATACTCAAACTTCAAGGAGAAAAAGGTAATTTAGCCCACCTTTAATAAGCAATTTTAACTCAAAATAGTTTTAATAAGGAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAATCACTATTTTCCGTTTCAACAAAAAAGCAAAAAGCAAAAAGAAAATAGAAAAAATGAAGCTTCTTTCGCGGTTGCTGCCCGCCCTCCCCTGAATCCCACCAAGCAATCTCGCTCACTCTCAGCTCGCTGTACGATTCCCATCGACATCAGTCTCCATCCCTCGTCTCTGAATGCAGAATCGTCACTGGTCGACTCGAGAATCGCTCCTCTCTACTCCGACTTATCGTTCTCCTTCGTCCCTCCCCTGTAAGTCTCTCATTCATTCGGCTGCTTCAAGGTTCGTTTGTGACTATTGCGTATTTTTGTGAAGACTTGGTGTAGTTACGATTGCTGCAATCACGATTGAATGATTGTTTCTTTTTTGTTTTGTTTTTATCACCTCAGATAGCCATTAGCAACAAATATCTACTTTATTCTAGCCCGAGCTACCGTAACTAGGAAGTGAGACAACAATTTTTTTGAGTATATGCTTTCAGTGATAGAGATGACATTTTTCTAATTTGGTTTTCTTTTGGTGGCAGGCTGAGGCTTCTTGGTGAACTTTTAGCAGAGGAAAGCGGTGCGACACCATTTTCATATAATAGATTTAAACAGACTGTATCTTTGTAA ATGGAAGAGCAGGGAAAGGATACAAGCATGTCCAACATTTCAGAAAATGAGCAGTGTGAGACGGACATTAGGGGATCCGAGGAGATGGAATCCAATATAGCTCGCCTACTAGAAAAGATTGAAAGCTTCACACAACTGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGCTTTTAAAGATCTTAGTAATGAATTTGAAGAGCAAATCATAGCCATTCACAAGAATAATGTTGAAAGATGGCAACACGAGATCAAAGAGCTGCGGTTGCTTGATTCATCAAATGAGGAAGCCAGTACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGAATCGTCACTGGTCGACTCGAGAATCGCTCCTCTCTACTCCGACTTATCGTTCTCCTTCGTCCCTCCCCTGCTGAGGCTTCTTGGTGAACTTTTAGCAGAGGAAAGCGGTGCGACACCATTTTCATATAATAGATTTAAACAGACTGTATCTTTGTAA ATGGAAGAGCAGGGAAAGGATACAAGCATGTCCAACATTTCAGAAAATGAGCAGTGTGAGACGGACATTAGGGGATCCGAGGAGATGGAATCCAATATAGCTCGCCTACTAGAAAAGATTGAAAGCTTCACACAACTGGTGTCTGAACTCCTGGAGTCGGGAAAGACTGCTTTTAAAGATCTTAGTAATGAATTTGAAGAGCAAATCATAGCCATTCACAAGAATAATGTTGAAAGATGGCAACACGAGATCAAAGAGCTGCGGTTGCTTGATTCATCAAATGAGGAAGCCAGTACTATTTTATGCAATGCTCGAAATTTACTTCAGAATGAATCGTCACTGGTCGACTCGAGAATCGCTCCTCTCTACTCCGACTTATCGTTCTCCTTCGTCCCTCCCCTGCTGAGGCTTCTTGGTGAACTTTTAGCAGAGGAAAGCGGTGCGACACCATTTTCATATAATAGATTTAAACAGACTGTATCTTTGTAA MEEQGKDTSMSNISENEQCETDIRGSEEMESNIARLLEKIESFTQLVSELLESGKTAFKDLSNEFEEQIIAIHKNNVERWQHEIKELRLLDSSNEEASTILCNARNLLQNESSLVDSRIAPLYSDLSFSFVPPLLRLLGELLAEESGATPFSYNRFKQTVSL Homology
BLAST of Csor.00g250160 vs. NCBI nr
Match: KAG6597717.1 (hypothetical protein SDJN03_10897, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305 bits (780), Expect = 4.72e-104 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. NCBI nr
Match: XP_022932730.1 (uncharacterized protein LOC111439190 isoform X2 [Cucurbita moschata]) HSP 1 Score: 207 bits (528), Expect = 2.51e-66 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. NCBI nr
Match: XP_022932727.1 (uncharacterized protein LOC111439190 isoform X1 [Cucurbita moschata] >XP_022932728.1 uncharacterized protein LOC111439190 isoform X1 [Cucurbita moschata] >XP_022932729.1 uncharacterized protein LOC111439190 isoform X1 [Cucurbita moschata]) HSP 1 Score: 207 bits (528), Expect = 4.23e-66 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. NCBI nr
Match: KAG7029163.1 (hypothetical protein SDJN02_10348 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207 bits (528), Expect = 6.06e-66 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. NCBI nr
Match: XP_023540394.1 (uncharacterized protein LOC111800780 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206 bits (523), Expect = 1.45e-65 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. ExPASy TrEMBL
Match: A0A6J1F2Y3 (uncharacterized protein LOC111439190 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439190 PE=4 SV=1) HSP 1 Score: 207 bits (528), Expect = 1.22e-66 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. ExPASy TrEMBL
Match: A0A6J1EXU6 (uncharacterized protein LOC111439190 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439190 PE=4 SV=1) HSP 1 Score: 207 bits (528), Expect = 2.05e-66 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g250160 vs. ExPASy TrEMBL
Match: A0A6J1IAR1 (uncharacterized protein LOC111470787 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470787 PE=4 SV=1) HSP 1 Score: 205 bits (521), Expect = 1.42e-65 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Csor.00g250160 vs. ExPASy TrEMBL
Match: A0A6J1I7S6 (uncharacterized protein LOC111470787 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470787 PE=4 SV=1) HSP 1 Score: 205 bits (521), Expect = 2.38e-65 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Csor.00g250160 vs. ExPASy TrEMBL
Match: A0A6J1DHK0 (uncharacterized protein LOC111020126 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020126 PE=4 SV=1) HSP 1 Score: 187 bits (476), Expect = 1.01e-58 Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0
BLAST of Csor.00g250160 vs. TAIR 10
Match: AT5G03050.1 (unknown protein; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 3.7e-29 Identity = 70/116 (60.34%), Postives = 90/116 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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