
Csor.00g249050 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCATTGCAGCAATCCTTGCCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCTGGTAATGTGGCTAATTATATGGATCAAATGGCCATGGCAATGGGAAACCTCGGAACTCTTGATGGCTTCCTACGCCAGGTAATTTGATTTTAGATTTTATGTCACTCTGTTCCATCTTGTTACATTTATACCGTGCTCATGCAACAAACAAGTAGAGTTGAAATCTTTGTCCATGTTTTCTCACTTTCATTTTTCCTTCTCTTTCTATAACTTGCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTTCCGCCTTCGAGCTCTAAGCTCTCTCTGGCCTGCACGGCCACGAGAGTGA ATGGATGCATTGCAGCAATCCTTGCCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCTGGTAATGTGGCTAATTATATGGATCAAATGGCCATGGCAATGGGAAACCTCGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTTCCGCCTTCGAGCTCTAAGCTCTCTCTGGCCTGCACGGCCACGAGAGTGA ATGGATGCATTGCAGCAATCCTTGCCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCTGGTAATGTGGCTAATTATATGGATCAAATGGCCATGGCAATGGGAAACCTCGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTTCCGCCTTCGAGCTCTAAGCTCTCTCTGGCCTGCACGGCCACGAGAGTGA MDALQQSLPETLASGTPATSGSSGNVANYMDQMAMAMGNLGTLDGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFFRLRALSSLWPARPRE Homology
BLAST of Csor.00g249050 vs. ExPASy Swiss-Prot
Match: O24160 (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum OX=4097 GN=TGA21 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.5e-38 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy Swiss-Prot
Match: Q6IVC2 (Transcription factor TGAL1 OS=Oryza sativa subsp. japonica OX=39947 GN=TGAL1 PE=1 SV=2) HSP 1 Score: 149.8 bits (377), Expect = 1.6e-35 Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy Swiss-Prot
Match: Q41558 (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 147.9 bits (372), Expect = 5.9e-35 Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy Swiss-Prot
Match: Q0JNL3 (Transcription factor TGA2.3 OS=Oryza sativa subsp. japonica OX=39947 GN=TGA2.3 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 5.5e-33 Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy Swiss-Prot
Match: Q6IVC3 (Transcription factor TGA2.2 OS=Oryza sativa subsp. japonica OX=39947 GN=TGA2.2 PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 7.2e-33 Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of Csor.00g249050 vs. NCBI nr
Match: KAG6596161.1 (TGACG-sequence-specific DNA-binding protein 2.1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187 bits (476), Expect = 8.81e-60 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g249050 vs. NCBI nr
Match: XP_022971206.1 (TGACG-sequence-specific DNA-binding protein TGA-2.1-like, partial [Cucurbita maxima]) HSP 1 Score: 172 bits (437), Expect = 5.91e-52 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. NCBI nr
Match: XP_022971309.1 (transcription factor HBP-1b(c38)-like [Cucurbita maxima]) HSP 1 Score: 172 bits (437), Expect = 4.23e-51 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. NCBI nr
Match: XP_022933538.1 (TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cucurbita moschata]) HSP 1 Score: 169 bits (427), Expect = 5.17e-51 Identity = 90/97 (92.78%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Csor.00g249050 vs. NCBI nr
Match: KAG5552601.1 (hypothetical protein RHGRI_010625 [Rhododendron griersonianum]) HSP 1 Score: 163 bits (412), Expect = 1.57e-49 Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy TrEMBL
Match: A0A6J1I2P8 (TGACG-sequence-specific DNA-binding protein TGA-2.1-like OS=Cucurbita maxima OX=3661 GN=LOC111469998 PE=4 SV=1) HSP 1 Score: 172 bits (437), Expect = 2.86e-52 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy TrEMBL
Match: A0A6J1I868 (transcription factor HBP-1b(C38)-like OS=Cucurbita maxima OX=3661 GN=LOC111470067 PE=3 SV=1) HSP 1 Score: 172 bits (437), Expect = 2.05e-51 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy TrEMBL
Match: A0A6J1F513 (TGACG-sequence-specific DNA-binding protein TGA-2.1-like OS=Cucurbita moschata OX=3662 GN=LOC111440933 PE=4 SV=1) HSP 1 Score: 169 bits (427), Expect = 2.50e-51 Identity = 90/97 (92.78%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy TrEMBL
Match: A0A6J1I655 (transcription factor HBP-1b(C38)-like OS=Cucurbita maxima OX=3661 GN=LOC111469991 PE=3 SV=1) HSP 1 Score: 172 bits (437), Expect = 8.25e-50 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. ExPASy TrEMBL
Match: A0A6J1EZ86 (transcription factor HBP-1b(C38)-like OS=Cucurbita moschata OX=3662 GN=LOC111440904 PE=3 SV=1) HSP 1 Score: 172 bits (437), Expect = 8.25e-50 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g249050 vs. TAIR 10
Match: AT5G06950.1 (bZIP transcription factor family protein ) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-34 Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Csor.00g249050 vs. TAIR 10
Match: AT5G06950.2 (bZIP transcription factor family protein ) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-34 Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Csor.00g249050 vs. TAIR 10
Match: AT5G06950.3 (bZIP transcription factor family protein ) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-34 Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Csor.00g249050 vs. TAIR 10
Match: AT5G06950.4 (bZIP transcription factor family protein ) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-34 Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Csor.00g249050 vs. TAIR 10
Match: AT3G12250.1 (TGACG motif-binding factor 6 ) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-32 Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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