Csor.00g246840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g246840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein NRT1/ PTR FAMILY 5.6-like
Location	Csor_Chr06: 1364678 .. 1365748 (+)
RNA-Seq Expression	Csor.00g246840
Synteny	Csor.00g246840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACAGAGGCGGAAAACAGAGGAGACGATCAAATTTTGGTTCATGATTCTTCTGTTGATCATAAACGACGGCTTCCACTCAGAGCTTCCACCGGCGTCTGGAAGCTTCCCTCTTCATCATCGGTACCCAGTTTATAATCTCCATTGTTTTTACTTCAAAGCTTTGCCTTTTCATTCATTATCTTTTTGCTTCTCTTGAGACGAAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGGAGAATCATGTTTCTTTTCTTTAATGTGGCTGTCATCACATAAAGTCCCGACCACACGAGTTCAATCACATGAAAAGTATAAGCTAAAGCTACTATGCCTCTTGTTCTTAACTTTATGAATAATGTTCCATTATTCTTCGTCTTTTTGGTTGCAGCCATTGAGTTCAGTGAGAGGCTGAGTTACTTTGGAATAGCTACGAGTTTGGTTATATATCTCACCAGGGTCATCCGACAAGACCTCAAAACAGCGGCTAGGAATGTTAATTATTGGACTGGCGTTACCACTTTGATGCCTCTGTTGGCGGCTTCTTGGCCGATGCTTATTTGGGTCGTTTCTCCACTGTTCTCGTTTCAACCATCGTCTACCTCTTCGTAATAATCCTTTTTCACTTCTGGGTTTCATTCAATTTATCATTTTGGTTAAGATTTTTTATCATGTGGGTGTGTAAAATGCAGGGGTTGTCTCTGCTGACATTGTCCACTCTTGTACCAAGCTTGAAGGCTTGCGGTAGTGAGCCCTGCGATGAGCCAAGGAAGCTCCATGAAGTCTTGTTCTTCACGGCGATTTACTTAATCTCCGTTTGGAACTGGTGGGCACAACCATCTCTTGAGAGCTTTGGCGCGGACCAGTTCGATGACGATCATGCAGAGGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGGCTTTTTCTGTGCTGGTGTCATATTTGGAGTGACGTTAATTGTGTATGTTCAAGAACAATGTCGGTTGGGGCATGGCTGGTGTGA

mRNA sequence

ATGAAAACAGAGGCGGAAAACAGAGGAGACGATCAAATTTTGGTTCATGATTCTTCTGTTGATCATAAACGACGGCTTCCACTCAGAGCTTCCACCGGCGTCTGGAAGCTTCCCTCTTCATCATCGCCATTGAGTTCAGGGTTGTCTCTGCTGACATTGTCCACTCTTGTACCAAGCTTGAAGGCTTGCGGTAGTGAGCCCTGCGATGAGCCAAGGAAGCTCCATGAAGTCTTGTTCTTCACGGCGATTTACTTAATCTCCGTTTGGAACTGGTGGGCACAACCATCTCTTGAGAGCTTTGGCGCGGACCAGTTCGATGACGATCATGCAGAGGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGGCTTTTTCTGTGCTGGTGTCATATTTGGAGTGACGTTAATTGTGTATGTTCAAGAACAATGTCGGTTGGGGCATGGCTGGTGTGA

Coding sequence (CDS)

ATGAAAACAGAGGCGGAAAACAGAGGAGACGATCAAATTTTGGTTCATGATTCTTCTGTTGATCATAAACGACGGCTTCCACTCAGAGCTTCCACCGGCGTCTGGAAGCTTCCCTCTTCATCATCGCCATTGAGTTCAGGGTTGTCTCTGCTGACATTGTCCACTCTTGTACCAAGCTTGAAGGCTTGCGGTAGTGAGCCCTGCGATGAGCCAAGGAAGCTCCATGAAGTCTTGTTCTTCACGGCGATTTACTTAATCTCCGTTTGGAACTGGTGGGCACAACCATCTCTTGAGAGCTTTGGCGCGGACCAGTTCGATGACGATCATGCAGAGGAAAGAAAGCAAAAGATGTCGTTTTTCAATTGGTGGAACTCTGGGCTTTTTCTGTGCTGGTGTCATATTTGGAGTGACGTTAATTGTGTATGTTCAAGAACAATGTCGGTTGGGGCATGGCTGGTGTGA

Protein sequence

MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKLPSSSSPLSSGLSLLTLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAEERKQKMSFFNWWNSGLFLCWCHIWSDVNCVCSRTMSVGAWLV

Homology

[Close]

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot
Match: P0CI03 (Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.7e-26
Identity = 56/81 (69.14%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 47  GLSLLTLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFD 106
           GL LLT+S  +P LK C  E C EPRK HEV FF AIYLIS+     +PSLESFGADQFD
Sbjct: 123 GLVLLTMSWFIPGLKPCHQEVCVEPRKAHEVAFFIAIYLISIGTGGHKPSLESFGADQFD 182

Query: 107 DDHAEERKQKMSFFNWWNSGL 128
           DDH EERK KMSFFNWWN  L
Sbjct: 183 DDHVEERKMKMSFFNWWNVSL 203

[Close]

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot
Match: Q9M331 (Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 47  GLSLLTLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFD 106
           GL LLTLS  +P LKAC  + C EPRK HE+ FF AIYLIS+     +PSLESFGADQF+
Sbjct: 122 GLILLTLSWFIPGLKACHEDMCVEPRKAHEIAFFIAIYLISIGTGGHKPSLESFGADQFE 181

Query: 107 DDHAEERKQKMSFFNWWNSGL 128
           D H EERK KMS+FNWWN+GL
Sbjct: 182 DGHPEERKMKMSYFNWWNAGL 202

[Close]

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-13
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 35  WKLPSSSSPLSSGLSLLTLSTLVPSLK-ACGSEPCDEPRKLHEVLFFTAIYLISVWNWWA 94
           W   +SS     G+ LLT++  V SL+  C +  C++   L    F+ ++Y I++     
Sbjct: 97  WTFTASSLIYVLGMILLTMAVTVKSLRPTCENGVCNKASSLQVTFFYISLYTIAIGAGGT 156

Query: 95  QPSLESFGADQFDDDHAEERKQKMSFFNWWNSGLFL 130
           +P++ +FGADQFD    EE+KQK+SFFNWW    FL
Sbjct: 157 KPNISTFGADQFDSYSIEEKKQKVSFFNWWMFSSFL 192

[Close]

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot
Match: Q93Z20 (Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 35  WKLPSSSSPLSSGLSLLTLSTLVPSLK--AC---GSEPCDEPRKLHEVLFFTAIYLISVW 94
           W + S S+    G++LLTLS  +P LK  AC    +  C     +   +FFT +YLI++ 
Sbjct: 125 WTIASFSAIYFIGMALLTLSASLPVLKPAACAGVAAALCSPATTVQYAVFFTGLYLIALG 184

Query: 95  NWWAQPSLESFGADQFDDDHAEERKQKMSFFNWW----NSGLFL 130
               +P + SFGADQFDD    ER +K SFFNW+    N G F+
Sbjct: 185 TGGIKPCVSSFGADQFDDTDPRERVRKASFFNWFYFSINIGSFI 228

[Close]

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot
Match: Q9M390 (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 46  SGLSLLTLSTLVPSLKA--CGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGAD 105
           SG++LLTLS  VP LK   C ++ C  P      +FF A+Y+I++     +P + SFGAD
Sbjct: 108 SGMTLLTLSASVPGLKPGNCNADTC-HPNSSQTAVFFVALYMIALGTGGIKPCVSSFGAD 167

Query: 106 QFDDDHAEERKQKMSFFNWW 124
           QFD++   E+ +K SFFNW+
Sbjct: 168 QFDENDENEKIKKSSFFNWF 186

[Close]

BLAST of Csor.00g246840 vs. NCBI nr
Match: KAG6596382.1 (Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327 bits (839), Expect = 2.39e-113
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKLPSSSSPLSSGLSLLTLSTLVPSL 60
           MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKLPSSSSPLSSGLSLLTLSTLVPSL
Sbjct: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKLPSSSSPLSSGLSLLTLSTLVPSL 60

Query: 61  KACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAEERKQKMSFF 120
           KACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAEERKQKMSFF
Sbjct: 61  KACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAEERKQKMSFF 120

Query: 121 NWWNSGLFLCWCHIWSDVNCVCSRTMSVGAWLV 153
           NWWNSGLFLCWCHIWSDVNCVCSRTMSVGAWLV
Sbjct: 121 NWWNSGLFLCWCHIWSDVNCVCSRTMSVGAWLV 153

[Close]

BLAST of Csor.00g246840 vs. NCBI nr
Match: KAG7027931.1 (Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196 bits (497), Expect = 2.76e-59
Identity = 115/196 (58.67%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLFGGFLADAYLGRFSTVLVSTIVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. NCBI nr
Match: KAG6596385.1 (Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196 bits (497), Expect = 2.28e-56
Identity = 115/196 (58.67%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLFGGFLADAYLGRFSTVLVSTIVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. NCBI nr
Match: XP_022941773.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita moschata])

HSP 1 Score: 196 bits (497), Expect = 2.28e-56
Identity = 115/196 (58.67%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLFGGFLADAYLGRFSTVLVSTIVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. NCBI nr
Match: XP_022971232.1 (protein NRT1/ PTR FAMILY 5.6-like [Cucurbita maxima])

HSP 1 Score: 194 bits (494), Expect = 6.27e-56
Identity = 114/196 (58.16%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAEN GDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENSGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L+S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLLGGFLADAYLGRFSTVLASTVVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL
Match: A0A6J1FT20 (protein NRT1/ PTR FAMILY 5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111447038 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.11e-56
Identity = 115/196 (58.67%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLFGGFLADAYLGRFSTVLVSTIVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL
Match: A0A6J1I1F1 (protein NRT1/ PTR FAMILY 5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111470020 PE=3 SV=1)

HSP 1 Score: 194 bits (494), Expect = 3.04e-56
Identity = 114/196 (58.16%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MKTEAEN GDDQILVHDSSVDHKRRLPLRASTGVWK                        
Sbjct: 1   MKTEAENSGDDQILVHDSSVDHKRRLPLRASTGVWKASLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L+S      GLSLL
Sbjct: 61  IYLTRVIRQDLKTAARNVNYWTGVTTLMPLLGGFLADAYLGRFSTVLASTVVYLFGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISV     +PSLESFGADQFDDDHAE
Sbjct: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVGTGGHKPSLESFGADQFDDDHAE 180

[Close]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL
Match: A0A6J1CW84 (protein NRT1/ PTR FAMILY 5.6-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014970 PE=3 SV=1)

HSP 1 Score: 155 bits (392), Expect = 2.06e-41
Identity = 95/191 (49.74%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 7   NRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------------ 66
           N   +  LVHDSSVDHK R+PLRASTGVWK                              
Sbjct: 22  NNNHNHDLVHDSSVDHKGRIPLRASTGVWKASLFIIAIEFSERLSYFGIATSLVIYLTKV 81

Query: 67  ---------------------------------LPSSSSPLSS------GLSLLTLSTLV 126
                                            L   S+ L+S      GLSLLT+STLV
Sbjct: 82  IRQDLKTAARNVNYWTGVTTLMPLLGGFLADAYLGRFSTVLASTIVYLLGLSLLTVSTLV 141

[Close]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL
Match: A0A5A7TPU6 (Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004790 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.14e-41
Identity = 94/196 (47.96%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MK +  +  DDQI V+DSSVDHK  LPLRASTGVWK                        
Sbjct: 1   MKRDQLSEEDDQIWVYDSSVDHKGNLPLRASTGVWKSSLFIIAIEFSERLSYFGIATSLV 60

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 61  IYLTRVIHEDLKTAARNVNYWTGVTTLMPLLGGFLADAYLGRFSTVLISTVIYLLGLSLL 120

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           T+STLVPSLK C  E C EPRK+HE+LFFTAIYLIS+     +PSLESFGADQFDDDH E
Sbjct: 121 TMSTLVPSLKPCDGETCQEPRKVHEILFFTAIYLISIGTGGHKPSLESFGADQFDDDHPE 180

[Close]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL
Match: A0A1S3B6K9 (protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103486351 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.36e-41
Identity = 94/196 (47.96%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 1   MKTEAENRGDDQILVHDSSVDHKRRLPLRASTGVWK------------------------ 60
           MK +  +  DDQI V+DSSVDHK  LPLRASTGVWK                        
Sbjct: 10  MKRDQLSEEDDQIWVYDSSVDHKGNLPLRASTGVWKSSLFIIAIEFSERLSYFGIATSLV 69

Query: 61  ---------------------------------------LPSSSSPLSS------GLSLL 120
                                                  L   S+ L S      GLSLL
Sbjct: 70  IYLTRVIHEDLKTAARNVNYWTGVTTLMPLLGGFLADAYLGRFSTVLISTVIYLLGLSLL 129

Query: 121 TLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFDDDHAE 127
           T+STLVPSLK C  E C EPRK+HE+LFFTAIYLIS+     +PSLESFGADQFDDDH E
Sbjct: 130 TMSTLVPSLKPCDGETCQEPRKVHEILFFTAIYLISIGTGGHKPSLESFGADQFDDDHPE 189

[Close]

BLAST of Csor.00g246840 vs. TAIR 10
Match: AT2G37900.1 (Major facilitator superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-27
Identity = 56/81 (69.14%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 47  GLSLLTLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFD 106
           GL LLT+S  +P LK C  E C EPRK HEV FF AIYLIS+     +PSLESFGADQFD
Sbjct: 123 GLVLLTMSWFIPGLKPCHQEVCVEPRKAHEVAFFIAIYLISIGTGGHKPSLESFGADQFD 182

Query: 107 DDHAEERKQKMSFFNWWNSGL 128
           DDH EERK KMSFFNWWN  L
Sbjct: 183 DDHVEERKMKMSFFNWWNVSL 203

[Close]

BLAST of Csor.00g246840 vs. TAIR 10
Match: AT3G53960.1 (Major facilitator superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-27
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 47  GLSLLTLSTLVPSLKACGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGADQFD 106
           GL LLTLS  +P LKAC  + C EPRK HE+ FF AIYLIS+     +PSLESFGADQF+
Sbjct: 122 GLILLTLSWFIPGLKACHEDMCVEPRKAHEIAFFIAIYLISIGTGGHKPSLESFGADQFE 181

Query: 107 DDHAEERKQKMSFFNWWNSGL 128
           D H EERK KMS+FNWWN+GL
Sbjct: 182 DGHPEERKMKMSYFNWWNAGL 202

[Close]

BLAST of Csor.00g246840 vs. TAIR 10
Match: AT2G40460.1 (Major facilitator superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.2e-14
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 35  WKLPSSSSPLSSGLSLLTLSTLVPSLK-ACGSEPCDEPRKLHEVLFFTAIYLISVWNWWA 94
           W   +SS     G+ LLT++  V SL+  C +  C++   L    F+ ++Y I++     
Sbjct: 97  WTFTASSLIYVLGMILLTMAVTVKSLRPTCENGVCNKASSLQVTFFYISLYTIAIGAGGT 156

Query: 95  QPSLESFGADQFDDDHAEERKQKMSFFNWWNSGLFL 130
           +P++ +FGADQFD    EE+KQK+SFFNWW    FL
Sbjct: 157 KPNISTFGADQFDSYSIEEKKQKVSFFNWWMFSSFL 192

[Close]

BLAST of Csor.00g246840 vs. TAIR 10
Match: AT1G62200.1 (Major facilitator superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 35  WKLPSSSSPLSSGLSLLTLSTLVPSLK--AC---GSEPCDEPRKLHEVLFFTAIYLISVW 94
           W + S S+    G++LLTLS  +P LK  AC    +  C     +   +FFT +YLI++ 
Sbjct: 125 WTIASFSAIYFIGMALLTLSASLPVLKPAACAGVAAALCSPATTVQYAVFFTGLYLIALG 184

Query: 95  NWWAQPSLESFGADQFDDDHAEERKQKMSFFNWW----NSGLFL 130
               +P + SFGADQFDD    ER +K SFFNW+    N G F+
Sbjct: 185 TGGIKPCVSSFGADQFDDTDPRERVRKASFFNWFYFSINIGSFI 228

[Close]

BLAST of Csor.00g246840 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 46  SGLSLLTLSTLVPSLKA--CGSEPCDEPRKLHEVLFFTAIYLISVWNWWAQPSLESFGAD 105
           SG++LLTLS  VP LK   C ++ C  P      +FF A+Y+I++     +P + SFGAD
Sbjct: 108 SGMTLLTLSASVPGLKPGNCNADTC-HPNSSQTAVFFVALYMIALGTGGIKPCVSSFGAD 167

Query: 106 QFDDDHAEERKQKMSFFNWW 124
           QFD++   E+ +K SFFNW+
Sbjct: 168 QFDENDENEKIKKSSFFNWF 186

The following BLAST results are available for this feature:

BLAST of Csor.00g246840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CI03	4.7e-26	69.14	Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1	[more]
Q9M331	1.0e-25	66.67	Protein NRT1/ PTR FAMILY 5.7 OS=Arabidopsis thaliana OX=3702 GN=NPF5.7 PE=2 SV=2	[more]
Q8VZR7	5.9e-13	38.54	Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2	[more]
Q93Z20	1.5e-11	40.38	Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1	[more]
Q9M390	1.5e-11	43.75	Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1	[more]

BLAST of Csor.00g246840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596382.1	2.39e-113	100.00	Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027931.1	2.76e-59	58.67	Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6596385.1	2.28e-56	58.67	Protein NRT1/ PTR FAMILY 5.6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941773.1	2.28e-56	58.67	protein NRT1/ PTR FAMILY 5.6-like [Cucurbita moschata]	[more]
XP_022971232.1	6.27e-56	58.16	protein NRT1/ PTR FAMILY 5.6-like [Cucurbita maxima]	[more]

BLAST of Csor.00g246840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT20	1.11e-56	58.67	protein NRT1/ PTR FAMILY 5.6-like OS=Cucurbita moschata OX=3662 GN=LOC111447038 ...	[more]
A0A6J1I1F1	3.04e-56	58.16	protein NRT1/ PTR FAMILY 5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111470020 PE...	[more]
A0A6J1CW84	2.06e-41	49.74	protein NRT1/ PTR FAMILY 5.6-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7TPU6	2.14e-41	47.96	Protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3B6K9	2.36e-41	47.96	protein NRT1/ PTR FAMILY 5.6 OS=Cucumis melo OX=3656 GN=LOC103486351 PE=3 SV=1	[more]

BLAST of Csor.00g246840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37900.1	3.3e-27	69.14	Major facilitator superfamily protein	[more]
AT3G53960.1	7.4e-27	66.67	Major facilitator superfamily protein	[more]
AT2G40460.1	4.2e-14	38.54	Major facilitator superfamily protein	[more]
AT1G62200.1	1.0e-12	40.38	Major facilitator superfamily protein	[more]
AT3G54140.1	1.0e-12	43.75	peptide transporter 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000109	Proton-dependent oligopeptide transporter family	PFAM	PF00854	PTR2	coord: 46..123 e-value: 8.7E-10 score: 38.0
IPR000109	Proton-dependent oligopeptide transporter family	PANTHER	PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	coord: 47..126
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 35..132 e-value: 2.9E-18 score: 67.3
None	No IPR available	PANTHER	PTHR11654:SF459	PROTEIN NRT1/ PTR FAMILY 5.6	coord: 47..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g246840.m01	Csor.00g246840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0022857	transmembrane transporter activity