Csor.00g246570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATGGCGTCTTCATCTTTAGGTTTTATCTTTGCTCTTTCTGCTATTGCTTCCATCGTCACCCACCTGGTTGTTTTGTCTGAAGCTCAAAATCCAACTCAACCCACCACCGATCCCGATCAAGGTTCTCTCTCTCTCTCTCCTTTTTCCTCTCCCACCTTTAGTGTGTTCGGAGGAATGAGCTATATGATGCAATCTACACTTTTACTTTCATTCAATTCAACTGAACTCTTTTGTTTGTTCGTAAATTCAGCTTATTTATACTCGTTTTTTGTGAGGATCACCAATGAGTCAAGTCTGAAAAACTTTACTCAAACAACTACATTGGAATGGATTGATTGACTTGTGAGTAATATTTTTGTGTGCAGCAAGAGCTTTGAATTCCATATTTAGTCAATGGAAGATATCAGCGCCATCAGGGGTGTGGAATATAAGCGGGAATCTGTGCAGTGGGATGGCAGTCAACACTACCACGGCCATTGACAGTTATGGAAACCCCATTCCTCTTATAAAATGCGATTGCTCAGCCAACAATGGTGCAACTTGCCTCATTACTCAACTGTAA ATGTCCATGGCGTCTTCATCTTTAGGTTTTATCTTTGCTCTTTCTGCTATTGCTTCCATCGTCACCCACCTGGTTGTTTTGTCTGAAGCTCAAAATCCAACTCAACCCACCACCGATCCCGATCAAGCAAGAGCTTTGAATTCCATATTTAGTCAATGGAAGATATCAGCGCCATCAGGGGTGTGGAATATAAGCGGGAATCTGTGCAGTGGGATGGCAGTCAACACTACCACGGCCATTGACAGTTATGGAAACCCCATTCCTCTTATAAAATGCGATTGCTCAGCCAACAATGGTGCAACTTGCCTCATTACTCAACTGTAA ATGTCCATGGCGTCTTCATCTTTAGGTTTTATCTTTGCTCTTTCTGCTATTGCTTCCATCGTCACCCACCTGGTTGTTTTGTCTGAAGCTCAAAATCCAACTCAACCCACCACCGATCCCGATCAAGCAAGAGCTTTGAATTCCATATTTAGTCAATGGAAGATATCAGCGCCATCAGGGGTGTGGAATATAAGCGGGAATCTGTGCAGTGGGATGGCAGTCAACACTACCACGGCCATTGACAGTTATGGAAACCCCATTCCTCTTATAAAATGCGATTGCTCAGCCAACAATGGTGCAACTTGCCTCATTACTCAACTGTAA MSMASSSLGFIFALSAIASIVTHLVVLSEAQNPTQPTTDPDQARALNSIFSQWKISAPSGVWNISGNLCSGMAVNTTTAIDSYGNPIPLIKCDCSANNGATCLITQL Homology
BLAST of Csor.00g246570 vs. ExPASy Swiss-Prot
Match: C0LGH2 (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy Swiss-Prot
Match: C0LGH3 (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 5.8e-15 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Csor.00g246570 vs. NCBI nr
Match: KAG6572466.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (543), Expect = 1.10e-69 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g246570 vs. NCBI nr
Match: XP_022968872.1 (probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Cucurbita maxima]) HSP 1 Score: 207 bits (527), Expect = 1.40e-59 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Csor.00g246570 vs. NCBI nr
Match: XP_022952106.1 (probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Cucurbita moschata]) HSP 1 Score: 207 bits (526), Expect = 1.92e-59 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of Csor.00g246570 vs. NCBI nr
Match: XP_023553977.1 (uncharacterized protein LOC111811393 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202 bits (515), Expect = 8.07e-58 Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 0
BLAST of Csor.00g246570 vs. NCBI nr
Match: XP_022952107.1 (probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Cucurbita moschata]) HSP 1 Score: 180 bits (457), Expect = 4.89e-50 Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy TrEMBL
Match: A0A6J1HUQ8 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111468051 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 6.78e-60 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy TrEMBL
Match: A0A6J1GJC5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111454868 PE=4 SV=1) HSP 1 Score: 207 bits (526), Expect = 9.30e-60 Identity = 103/107 (96.26%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy TrEMBL
Match: A0A6J1GJI1 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111454869 PE=4 SV=1) HSP 1 Score: 180 bits (457), Expect = 2.37e-50 Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy TrEMBL
Match: A0A6J1GJJ5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111454871 PE=4 SV=1) HSP 1 Score: 171 bits (432), Expect = 5.72e-47 Identity = 85/103 (82.52%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of Csor.00g246570 vs. ExPASy TrEMBL
Match: A0A1S3BGN1 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103489643 PE=4 SV=1) HSP 1 Score: 168 bits (425), Expect = 5.03e-46 Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of Csor.00g246570 vs. TAIR 10
Match: AT1G56120.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-18 Identity = 45/78 (57.69%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Csor.00g246570 vs. TAIR 10
Match: AT1G56130.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Csor.00g246570 vs. TAIR 10
Match: AT1G56140.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 81.6 bits (200), Expect = 4.1e-16 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Csor.00g246570 vs. TAIR 10
Match: AT1G56145.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 80.9 bits (198), Expect = 7.0e-16 Identity = 48/100 (48.00%), Postives = 60/100 (60.00%), Query Frame = 0
BLAST of Csor.00g246570 vs. TAIR 10
Match: AT1G56145.2 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 80.9 bits (198), Expect = 7.0e-16 Identity = 48/100 (48.00%), Postives = 60/100 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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