Csor.00g243410 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGCCCCCAAATTATGAAGCTGCTAACAAGCTCTTTGAACATGGAAGAACAAAGGTTCTCTTTTTCATTTTTTCTCTGCCAGATCTAATATCATCTTTGTTTCTTAATTTTTTTTGTTCATCGTAGGTTTGGCCGGAAGGATCTCTCGAAGAAACCGTGCAGAATATCGTAAAATCAATGCACGCCGAGTTAGCTTACATGACAAGATTGCAAGATTTCAAGACCATAGACCCTAAAAAATTCGTAGTTTATATCAATGGTAATACTAATTTTGTTACGTTAAATATGTTTCAATCGAATCGTACTGTGATGTCCCACATTTGTTGGAGAGGAAAACAAACCACTGATTATAAGGGTGTGGAAACCTTGTCCTAGCAGATGCATTTTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATTTGGTAGCAGTGGATCTGGGCCGTTACACGAAAACTCAAATTTTCTACGAACTTCTGAAAAATACGGAGGAATTAGCTTAAATCATCTCCTCGTATTTTCGGTTTAAGTCGGGTCTAAAATATCCCAAAATTAACCTAACTCGGCTGGATGATTAAATGATGAATTAGTGAATTTGTTGTGTTTGGTAGTGTAGGAAGAGAGGGGCTCTCAGGTGAAGAAGCATTGAAGCTTGGAAGCTTCAATGCAATGCTGAAGAACACTCTACCAGAGGAATTCCATTACTTCAAAGCAAAGGAAGAGACATTTGAATCAACTTATAATGACTTCAAGACATGTTTTCCAAGAGGGTTTGCATGGGAACTTCTTCAGCTTTATTCTCCTCCTCCTTTGGTTGCTTTCAAGTTTAGGCATTGGGGTTTCTTTGAAGGGCCCTATAAAGCTCATTCCCCTACTCGAGAGATGGTCGAGTTCTTCGGCATGGGAACTGTCAAGGTAACGTCGAGATTCAATAACGACCCTTCTTGTCAAATGTATCCTCCTATACATATTTAACGTCACGCTCATGAATGTTTGTGTTAGTTTGTGTCCCTGTCGACTAATTTGATCATAACCTAATGATTTGTCTTCTCCACCAATCGTGAGAATAGTTTAAAATTTTAAGCAGGTGTATATCACATGGAACTATAACAGCCCAAGTTCACTACTAGTAGATATTGTCCTCTTTTGAAACGTGTCTGCTAGGGAGAGGTTTCAACACTCTTATAAAAAAAAATGCTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCGACTCCCCTCTGAGTCCCAGCATCCTTGCTGACACTTGTTCTCTTCTCCAATCATGTGGGACCACTCAATCCACCCTTGTGTCCACTCCCCTTAGAGCTCAGCCTTCTCACTGGCACATCGCCCAGTGTTTGGATATGATACAATTTGTAACAGCCCAAGTCCATCGATAGTAAATATTGTCTTCTTTAGACTTTCCATTTCGAGCTTCCACACCCTTGTAAAAAATATTTCATTTTCGTCTCCAACCGATGTAGGATCTCACATGAACTTAAGACGTTCTAAATCCCTTCTTGACATTTATTTGCACAGGTAGATTCATCATGGAAGGTTGAAGAAGTTCATGTGTTCTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTGAAAGGCAAAAAAACAGCTTCTGAATCCAAAACTGATGATTCATCTGCCTCTGCCTGCCCACTCTTCAATCAACCAAAGTAG ATGGGAAAGCCCCCAAATTATGAAGCTGCTAACAAGCTCTTTGAACATGGAAGAACAAAGGTTTGGCCGGAAGGATCTCTCGAAGAAACCGTGCAGAATATCGTAAAATCAATGCACGCCGAGTTAGCTTACATGACAAGATTGCAAGATTTCAAGACCATAGACCCTAAAAAATTCGTAGTTTATATCAATGGAAGAGAGGGGCTCTCAGGTGAAGAAGCATTGAAGCTTGGAAGCTTCAATGCAATGCTGAAGAACACTCTACCAGAGGAATTCCATTACTTCAAAGCAAAGGAAGAGACATTTGAATCAACTTATAATGACTTCAAGACATGTTTTCCAAGAGGGTTTGCATGGGAACTTCTTCAGCTTTATTCTCCTCCTCCTTTGGTTGCTTTCAAGTTTAGGCATTGGGGTTTCTTTGAAGGGCCCTATAAAGCTCATTCCCCTACTCGAGAGATGGTCGAGTTCTTCGGCATGGGAACTGTCAAGGTAGATTCATCATGGAAGGTTGAAGAAGTTCATGTGTTCTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTGAAAGGCAAAAAAACAGCTTCTGAATCCAAAACTGATGATTCATCTGCCTCTGCCTGCCCACTCTTCAATCAACCAAAGTAG ATGGGAAAGCCCCCAAATTATGAAGCTGCTAACAAGCTCTTTGAACATGGAAGAACAAAGGTTTGGCCGGAAGGATCTCTCGAAGAAACCGTGCAGAATATCGTAAAATCAATGCACGCCGAGTTAGCTTACATGACAAGATTGCAAGATTTCAAGACCATAGACCCTAAAAAATTCGTAGTTTATATCAATGGAAGAGAGGGGCTCTCAGGTGAAGAAGCATTGAAGCTTGGAAGCTTCAATGCAATGCTGAAGAACACTCTACCAGAGGAATTCCATTACTTCAAAGCAAAGGAAGAGACATTTGAATCAACTTATAATGACTTCAAGACATGTTTTCCAAGAGGGTTTGCATGGGAACTTCTTCAGCTTTATTCTCCTCCTCCTTTGGTTGCTTTCAAGTTTAGGCATTGGGGTTTCTTTGAAGGGCCCTATAAAGCTCATTCCCCTACTCGAGAGATGGTCGAGTTCTTCGGCATGGGAACTGTCAAGGTAGATTCATCATGGAAGGTTGAAGAAGTTCATGTGTTCTTTGATCCAGCTGAGCTATTTGGAAGTCTTTTGAAAGGCAAAAAAACAGCTTCTGAATCCAAAACTGATGATTCATCTGCCTCTGCCTGCCCACTCTTCAATCAACCAAAGTAG MGKPPNYEAANKLFEHGRTKVWPEGSLEETVQNIVKSMHAELAYMTRLQDFKTIDPKKFVVYINGREGLSGEEALKLGSFNAMLKNTLPEEFHYFKAKEETFESTYNDFKTCFPRGFAWELLQLYSPPPLVAFKFRHWGFFEGPYKAHSPTREMVEFFGMGTVKVDSSWKVEEVHVFFDPAELFGSLLKGKKTASESKTDDSSASACPLFNQPK Homology
BLAST of Csor.00g243410 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 178.7 bits (452), Expect = 6.9e-44 Identity = 89/210 (42.38%), Postives = 122/210 (58.10%), Query Frame = 0
BLAST of Csor.00g243410 vs. NCBI nr
Match: KAG6577038.1 (hypothetical protein SDJN03_24612, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 444 bits (1142), Expect = 1.56e-157 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Csor.00g243410 vs. NCBI nr
Match: XP_023521790.1 (pathogen-related protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 422 bits (1084), Expect = 2.25e-148 Identity = 200/214 (93.46%), Postives = 211/214 (98.60%), Query Frame = 0
BLAST of Csor.00g243410 vs. NCBI nr
Match: XP_022984342.1 (pathogen-related protein-like [Cucurbita maxima]) HSP 1 Score: 418 bits (1074), Expect = 1.16e-146 Identity = 199/214 (92.99%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of Csor.00g243410 vs. NCBI nr
Match: XP_023552867.1 (pathogen-related protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 420 bits (1079), Expect = 1.65e-146 Identity = 199/213 (93.43%), Postives = 210/213 (98.59%), Query Frame = 0
BLAST of Csor.00g243410 vs. NCBI nr
Match: XP_022931451.1 (pathogen-related protein-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 397 bits (1019), Expect = 2.25e-138 Identity = 193/214 (90.19%), Postives = 198/214 (92.52%), Query Frame = 0
BLAST of Csor.00g243410 vs. ExPASy TrEMBL
Match: A0A6J1J1X7 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482674 PE=4 SV=1) HSP 1 Score: 418 bits (1074), Expect = 5.60e-147 Identity = 199/214 (92.99%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of Csor.00g243410 vs. ExPASy TrEMBL
Match: A0A6J1ETP3 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437627 PE=4 SV=1) HSP 1 Score: 397 bits (1019), Expect = 1.09e-138 Identity = 193/214 (90.19%), Postives = 198/214 (92.52%), Query Frame = 0
BLAST of Csor.00g243410 vs. ExPASy TrEMBL
Match: A0A6J1EYN7 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437625 PE=4 SV=1) HSP 1 Score: 355 bits (912), Expect = 2.69e-122 Identity = 168/211 (79.62%), Postives = 184/211 (87.20%), Query Frame = 0
BLAST of Csor.00g243410 vs. ExPASy TrEMBL
Match: A0A6J1ETM3 (pathogen-related protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437625 PE=4 SV=1) HSP 1 Score: 355 bits (912), Expect = 4.55e-122 Identity = 168/211 (79.62%), Postives = 184/211 (87.20%), Query Frame = 0
BLAST of Csor.00g243410 vs. ExPASy TrEMBL
Match: A0A6J1EUA5 (pathogen-related protein-like OS=Cucurbita moschata OX=3662 GN=LOC111437626 PE=4 SV=1) HSP 1 Score: 340 bits (873), Expect = 2.50e-116 Identity = 157/213 (73.71%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of Csor.00g243410 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 278.1 bits (710), Expect = 6.0e-75 Identity = 122/199 (61.31%), Postives = 163/199 (81.91%), Query Frame = 0
BLAST of Csor.00g243410 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 266.5 bits (680), Expect = 1.8e-71 Identity = 119/199 (59.80%), Postives = 160/199 (80.40%), Query Frame = 0
BLAST of Csor.00g243410 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58 Identity = 98/162 (60.49%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Csor.00g243410 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58 Identity = 98/162 (60.49%), Postives = 133/162 (82.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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