Csor.00g242570 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g242570
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ankyrin repeat family protein
Location	Csor_Chr16: 2716144 .. 2718505 (+)
RNA-Seq Expression	Csor.00g242570
Synteny	Csor.00g242570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGACCTTAAAGAGGTGGGTTTCGTTTTCTCCTCTGCTATTTTCTTAGTTGAAGTGATGATGGGTGTTGTTTTTGTTGATTGATTCTTGAATTTTGTTTTGCAAATCTTGATCAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGTAAGTATCCTTATCTCTTACGGATTCATTCAATATAAAGCTTGAATTGATATGCTGAATTTATCTGGTATTTTATTGTTATCGATGAATCAAGTATTTGGAGTTCTAGAAAAGCTCTTGGGAAGTGATCTCTGTTGAGGATTATTGGGATTGGGAGTGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACATGGTATCAGAGCCATGCCCTAAACTTAACCATGCCAATAGAATCCTCAAATATCGAACAAAGAATGGCGAGCCTCGAAGGTGTAGTCAAAAGTGACTAACATGTCGAACAAATGGTGTACTTTGTTCGAGGGCTCCAGAGAAAGGAGTCGAGCCTCAATTAAGGGGAGGCTATTCGAGAGCTCCATAAGCCTCAGGGGAGGCTTATAGTGTGCTTTGTTCGAGGGGAGGTGTTGAGGATTATTGGGATTGGGAGTGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACAATCTCATCCAATTCAATCATGAACAGTTTTGCTAACTTGTACTGTTAAATATGAAATGAATAAGCTATGCCCAATAGAATGGAATCTGAAGAACAAAGAATTAACATTTGCTAAAATTCATTGACAAAACTAACTAAAGAAGGGAGAAGGAAAGAAAAACTAGATTTAAGAGTATGGCTGATTCGTGATAGAGATTTTCTTTTTCTCCATGGGACATGCTCGGATGAGGGAGCACGATTAAGTAGGGAGCACATAGTGGGGGGAACGGAAATGAATTCCCAGTCCACCACTCGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGACTTACTCTCAAGTTTTTTAAAACGCGTCCGCTAGGGAGAGGTTTCCACACCCTTATAAAGAAAGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATTCATCCCCCTTCGGGACTGAGTGTCATCGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACCCCCTTCAGGGCCTAGCATCCTTGCTGGCGCACTGCCTCGTATCCACCCCCTTTGGGGCTCAGCCTCATCGCTGGCACATCGCTTGGTGTCTGGCTTTGATACCATTTGTAACAGCCTACCGGATACTATCCTTCATGGGCTCTCTCAAGATTTTTAAAATGCCTCTTCTAGGGAGAGGTTTCCACACCCTTATAATGGATCTCACATGTTATGTCTGGTAAATATTGTGTTGATGCTATGTTGCTGGGTTCACTATACGTAACACTTTTGAGGAGCAAGCAGACATGCACCGTGTAGGCATAGACTGTAGGCACGCGGTGGTGCTCGGGCTTGTAAAGCTCTTATTATTTCCTTGAACAAATGTGGATAAACAACCAAATTTTCTTGTTCTGAAAGTAGTTAAAGATATTGGCATTAGGATGGGTAAGAATATAGATAAAACGTTGAAGCCTTGTTGTAAAGATCCTAAACATTGATTATGTTGACATTGAACCCCAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

mRNA sequence

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGACCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

Coding sequence (CDS)

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGACCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

Protein sequence

MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES

Homology

[Close]

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot
Match: Q9FNP4 (Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=PIA2 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.2e-63
Identity = 118/168 (70.24%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 8   SMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKG 67
           S+ R+  RRRS R+ V   DDRGW  LHI ARKGDLK VK+LL++GMDVNA AWGPKSKG
Sbjct: 10  SLRRNSFRRRSPRSNV---DDRGWNPLHIKARKGDLKSVKQLLDQGMDVNALAWGPKSKG 69

Query: 68  LTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAF 127
           ++ LHLAAEGGH+++MD LLERGANIDA+T G+CGWTPLH+AAKER++EAVKFLVENGAF
Sbjct: 70  VSALHLAAEGGHIEVMDLLLERGANIDAKTWGSCGWTPLHAAAKERKREAVKFLVENGAF 129

Query: 128 LPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSS--ETSCSSES 174
           L DDI D RFNPP+HYC GLEWAYEE+K+L   + SSS  +TS SS++
Sbjct: 130 LADDITDTRFNPPVHYCHGLEWAYEEMKKLNSESSSSSGGDTSSSSDN 174

[Close]

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot
Match: Q9FF09 (Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=PIA1 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.3e-60
Identity = 117/173 (67.63%), Postives = 137/173 (79.19%), Query Frame = 0


Query: 1   MPQEQRGSMS-RSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAE 60
           M QEQ  ++S R  S RR      ++RDDRGWT LHI AR+GDLK VK LL++G DVNA 
Sbjct: 1   MLQEQPVALSFRPNSFRRRSMETGVDRDDRGWTQLHIKAREGDLKAVKELLDQGADVNAL 60

Query: 61  AWGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVK 120
           A GPKSKG+TPLHLAA+GGH+++MD LLERGAN++ART GACGWTPLH+AAKER++EAVK
Sbjct: 61  ACGPKSKGMTPLHLAAKGGHIEVMDLLLERGANMEARTSGACGWTPLHAAAKERKREAVK 120

Query: 121 FLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNG-SSSETSCSS 172
           FLV NGAFLPDDI D RFNPP+ YC GLEWAYEE K+L      S  +TSCSS
Sbjct: 121 FLVGNGAFLPDDITDSRFNPPVQYCHGLEWAYEERKKLSEDTSLSCGDTSCSS 173

[Close]

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot
Match: G5E8K5 (Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 29  RGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLE 88
           RG T+LH+ AR G  + V+ L+ +G  V A+A        TPLH++A  G  D++ +LL+
Sbjct: 448 RGETALHMAARSGQAEVVRYLVQDGAQVEAKA----KDDQTPLHISARLGKADIVQQLLQ 507

Query: 89  RGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLE 148
           +GA+ +A T    G+TPLH AA+E  ++   FL+++GA L   I   +   PLH     +
Sbjct: 508 QGASPNAAT--TSGYTPLHLAAREGHEDVAAFLLDHGASL--SITTKKGFTPLHV--AAK 567

Query: 149 WAYEEVKRLQLYNGSSSETSCSS 172
           +   EV  L L   +S + +  S
Sbjct: 568 YGKLEVASLLLQKSASPDAAGKS 580

[Close]

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot
Match: O70511 (Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 29  RGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLE 88
           RG T+LH+ AR G  + V+ L+ +G  V A+A        TPLH++A  G  D++ +LL+
Sbjct: 473 RGETALHMAARSGQAEVVRYLVQDGAQVEAKA----KDDQTPLHISARLGKADIVQQLLQ 532

Query: 89  RGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLE 148
           +GA+ +A T    G+TPLH +A+E  ++   FL+++GA L   I   +   PLH     +
Sbjct: 533 QGASPNAAT--TSGYTPLHLSAREGHEDVAAFLLDHGASL--SITTKKGFTPLHV--AAK 592

Query: 149 WAYEEVKRLQLYNGSSSETSCSS 172
           +   EV  L L   +S + +  S
Sbjct: 593 YGKLEVASLLLQKSASPDAAGKS 605

[Close]

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot
Match: Q6UB98 (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-12
Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 2   PQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAW 61
           P +   +  ++ S     +++V  R++RG T LH+ A +GD+K+VK L++ G +VN + +
Sbjct: 157 PSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDF 216

Query: 62  GPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFL 121
                G TPLH A   G+ D+   L+  GA  D  T+G    TPLH +A    ++ VK L
Sbjct: 217 A----GWTPLHEACNVGYYDVAKILIAAGA--DVNTQGLDDDTPLHDSASSGHRDIVKLL 274

Query: 122 VENG 126
           + +G
Sbjct: 277 LRHG 274

[Close]

BLAST of Csor.00g242570 vs. NCBI nr
Match: KAG6577121.1 (Phytochrome-interacting ankyrin-repeat protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015123.1 Phytochrome-interacting ankyrin-repeat protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (920), Expect = 4.85e-125
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. NCBI nr
Match: XP_022931269.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata] >XP_022931270.1 phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 356 bits (913), Expect = 5.66e-124
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. NCBI nr
Match: XP_022931271.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 356 bits (913), Expect = 2.25e-123
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 40  MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 99

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 100 WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 159

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 160 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 212

[Close]

BLAST of Csor.00g242570 vs. NCBI nr
Match: XP_022985439.1 (phytochrome-interacting ankyrin-repeat protein 2-like [Cucurbita maxima])

HSP 1 Score: 354 bits (908), Expect = 3.28e-123
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRG MSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGPMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. NCBI nr
Match: XP_023552739.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351 bits (901), Expect = 3.83e-122
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLT LHLAAEGGHLDLMDELLERGANID RTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTALHLAAEGGHLDLMDELLERGANIDTRTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL
Match: A0A6J1EYZ5 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437502 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 2.74e-124
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL
Match: A0A6J1ET80 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437502 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.09e-123
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 40  MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 99

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 100 WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 159

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 160 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 212

[Close]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL
Match: A0A6J1JDA1 (phytochrome-interacting ankyrin-repeat protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483448 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 1.59e-123
Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQRG MSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA
Sbjct: 1   MPQEQRGPMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL
Match: A0A0A0KV64 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G055330 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 8.77e-112
Identity = 156/173 (90.17%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQR  +SRSLSRRRSFR EV N DDRGWTSLHIGARKGDLKEVKRLLN+GMDVN+ A
Sbjct: 1   MPQEQRSPISRSLSRRRSFRYEVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNSIA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHL++MDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLEVMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 173
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEE+KRL   N SS ETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEMKRLHHDNSSSEETSCSSES 173

[Close]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL
Match: A0A6J1FVZ3 (phytochrome-interacting ankyrin-repeat protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447369 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 7.46e-111
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEA 60
           MPQEQR S+SRSLSRRRSFR +V N DDRGWTSLHIGARKGDLKEVKRLLN+GMDVNA A
Sbjct: 1   MPQEQRSSISRSLSRRRSFRYDVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNALA 60

Query: 61  WGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKF 120
           WGPKSKGLTPLHLAAEGGHL++MDELLERGANIDARTKGACGWTPLHSAAKERR+EAVKF
Sbjct: 61  WGPKSKGLTPLHLAAEGGHLEVMDELLERGANIDARTKGACGWTPLHSAAKERRREAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSS 171
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAY+E+KRLQ   GSS+ETSC S
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYDEMKRLQHETGSSAETSCCS 171

[Close]

BLAST of Csor.00g242570 vs. TAIR 10
Match: AT5G61230.1 (Ankyrin repeat family protein )

HSP 1 Score: 241.1 bits (614), Expect = 6.5e-64
Identity = 118/168 (70.24%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 8   SMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKG 67
           S+ R+  RRRS R+ V   DDRGW  LHI ARKGDLK VK+LL++GMDVNA AWGPKSKG
Sbjct: 10  SLRRNSFRRRSPRSNV---DDRGWNPLHIKARKGDLKSVKQLLDQGMDVNALAWGPKSKG 69

Query: 68  LTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAF 127
           ++ LHLAAEGGH+++MD LLERGANIDA+T G+CGWTPLH+AAKER++EAVKFLVENGAF
Sbjct: 70  VSALHLAAEGGHIEVMDLLLERGANIDAKTWGSCGWTPLHAAAKERKREAVKFLVENGAF 129

Query: 128 LPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSS--ETSCSSES 174
           L DDI D RFNPP+HYC GLEWAYEE+K+L   + SSS  +TS SS++
Sbjct: 130 LADDITDTRFNPPVHYCHGLEWAYEEMKKLNSESSSSSGGDTSSSSDN 174

[Close]

BLAST of Csor.00g242570 vs. TAIR 10
Match: AT5G07840.1 (Ankyrin repeat family protein )

HSP 1 Score: 231.5 bits (589), Expect = 5.2e-61
Identity = 117/173 (67.63%), Postives = 137/173 (79.19%), Query Frame = 0


Query: 1   MPQEQRGSMS-RSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAE 60
           M QEQ  ++S R  S RR      ++RDDRGWT LHI AR+GDLK VK LL++G DVNA 
Sbjct: 1   MLQEQPVALSFRPNSFRRRSMETGVDRDDRGWTQLHIKAREGDLKAVKELLDQGADVNAL 60

Query: 61  AWGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVK 120
           A GPKSKG+TPLHLAA+GGH+++MD LLERGAN++ART GACGWTPLH+AAKER++EAVK
Sbjct: 61  ACGPKSKGMTPLHLAAKGGHIEVMDLLLERGANMEARTSGACGWTPLHAAAKERKREAVK 120

Query: 121 FLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNG-SSSETSCSS 172
           FLV NGAFLPDDI D RFNPP+ YC GLEWAYEE K+L      S  +TSCSS
Sbjct: 121 FLVGNGAFLPDDITDSRFNPPVQYCHGLEWAYEERKKLSEDTSLSCGDTSCSS 173

[Close]

BLAST of Csor.00g242570 vs. TAIR 10
Match: AT2G03430.1 (Ankyrin repeat family protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-14
Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 13  LSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLH 72
           LS     +  + ++DD GW  LH  A  G+ + V+ LL  G DVNA+  G    G T LH
Sbjct: 66  LSSSDEAKTVINSKDDEGWAPLHSAASIGNAELVEVLLTRGADVNAKNNG----GRTALH 125

Query: 73  LAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGA 127
            AA  G L++   LL  GA I+   K  C  TPLH AA   + E  +FL+E GA
Sbjct: 126 YAASKGRLEIAQLLLTHGAKINITDKVGC--TPLHRAASVGKLEVCEFLIEEGA 173

[Close]

BLAST of Csor.00g242570 vs. TAIR 10
Match: AT5G53470.1 (acyl-CoA binding protein 1 )

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 33  SLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLERGAN 92
           ++H  AR+G+++ + + +  G+ VNA      S+G TPLH A + GHL++ + L+++ A+
Sbjct: 221 AIHAFAREGEVENLLKCIENGIPVNAR----DSEGRTPLHWAIDRGHLNVAEALVDKNAD 280

Query: 93  IDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYE 152
           ++A+     G T LH A    R+   +FLV+  A     I D   N PL  C   EW++ 
Sbjct: 281 VNAKDNE--GQTSLHYAVVCEREALAEFLVKQKA--DTTIKDEDGNSPLDLCES-EWSWM 335

Query: 153 EVKR 157
             K+
Sbjct: 341 REKK 335

[Close]

BLAST of Csor.00g242570 vs. TAIR 10
Match: AT3G04710.1 (ankyrin repeat family protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 26  RDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDE 85
           +D+ G T L   AR+G ++ VK LL +G D N  +      G T LH AA  G ++L+ E
Sbjct: 85  KDETGDTPLVHAARQGQIETVKYLLEQGADPNIAS----ELGATALHHAAGTGEIELLKE 144

Query: 86  LLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGA 127
           LL RG  +D+ ++     TPL  AA   +K AV+ L+E+ A
Sbjct: 145 LLSRGVPVDSESESG---TPLIWAAGHDQKNAVEVLLEHNA 178

The following BLAST results are available for this feature:

BLAST of Csor.00g242570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP4	9.2e-63	70.24	Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q9FF09	7.3e-60	67.63	Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702...	[more]
G5E8K5	1.0e-13	34.97	Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1	[more]
O70511	2.3e-13	34.27	Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3	[more]
Q6UB98	9.6e-12	33.87	Ankyrin repeat domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ANKRD12 P...	[more]

BLAST of Csor.00g242570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577121.1	4.85e-125	100.00	Phytochrome-interacting ankyrin-repeat protein 2, partial [Cucurbita argyrosperm...	[more]
XP_022931269.1	5.66e-124	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita mosc...	[more]
XP_022931271.1	2.25e-123	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita mosc...	[more]
XP_022985439.1	3.28e-123	98.84	phytochrome-interacting ankyrin-repeat protein 2-like [Cucurbita maxima]	[more]
XP_023552739.1	3.83e-122	98.27	phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita pepo...	[more]

BLAST of Csor.00g242570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYZ5	2.74e-124	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 OS=Cucurbita mo...	[more]
A0A6J1ET80	1.09e-123	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 OS=Cucurbita mo...	[more]
A0A6J1JDA1	1.59e-123	98.84	phytochrome-interacting ankyrin-repeat protein 2-like OS=Cucurbita maxima OX=366...	[more]
A0A0A0KV64	8.77e-112	90.17	ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G055...	[more]
A0A6J1FVZ3	7.46e-111	89.47	phytochrome-interacting ankyrin-repeat protein 2-like OS=Cucurbita moschata OX=3...	[more]

BLAST of Csor.00g242570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61230.1	6.5e-64	70.24	Ankyrin repeat family protein	[more]
AT5G07840.1	5.2e-61	67.63	Ankyrin repeat family protein	[more]
AT2G03430.1	4.7e-14	40.35	Ankyrin repeat family protein	[more]
AT5G53470.1	1.3e-11	32.26	acyl-CoA binding protein 1	[more]
AT3G04710.1	2.4e-10	38.61	ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 117..131 score: 29.35 coord: 67..82 score: 46.35
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 101..134 e-value: 6.1E-4 score: 29.1 coord: 66..95 e-value: 2.9E-7 score: 40.1 coord: 29..58 e-value: 0.06 score: 22.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 29..61 score: 10.89985
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 101..126 score: 10.28552
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 66..98 score: 15.62752
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 34..126 e-value: 6.9E-18 score: 65.0
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 6..169 e-value: 2.7E-32 score: 114.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 25..144
None	No IPR available	PANTHER	PTHR24203	ANKYRIN REPEAT FAMILY PROTEIN	coord: 5..172
None	No IPR available	PANTHER	PTHR24203:SF59	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 5..172
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 66..98 score: 14.238625
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 101..126 score: 10.258919
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 29..58 score: 10.577295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g242570.m01	Csor.00g242570.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding