Csor.00g241710 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g241710
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Guanine nucleotide-binding protein subunit gamma 3-like
Location	Csor_Chr05: 11176040 .. 11176892 (-)
RNA-Seq Expression	Csor.00g241710
Synteny	Csor.00g241710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGTGGAGCAGGAAGAATTGAAGTCTACCGAAGGCCTTCCACCTGCTTCTAGATGCTGCAAAGAGTATGTATACCTTCGGAATAAATTGGGTTGTTTGCTCTTCCAGTTAGCTACCGTTTAGTTGATTTGTGCTCTCTTTTTTCACTTTGCAGGGTAGCTGACCATGTGATCGCCAACTCAGATCCCTTGATACCAACGTAAGGGGTTCCTCATCATTTTAATTTTCTGAAAGTCTTTGTAGTTAATCATTCACGCTATATATTTCTTCTTTTAATCAGATACAAGAAGCATCGCCGCAGATGTCAATTTTGGAAATGGCTCTGGTATGATTCGCCTTATCTTTCATTGCTTAGGTTAAGATTGTGTTTGGAAACAATGAAGATACTAACCGAATCGAATACTAGTAGACCAGATCTTGATTTCCCTTGTTTCCATTGCTAATTGACTCAGATCTGTACTCTGCATTCTGCGTAGTCAGGGTATTGTCTAGTGCATTTGACTCAGATTAGTTCTCACTTGATGCAGTGGATTCCCCTGTTGTAAATTATCCTGGATTTGCTGTTGCTGTTATGCTGGATGCTCGATCCATCTTGAAATCCCACCCTGCTGCAACTGTAATAATCCATGTAAATGCCTATCGTGTGGCAGCTGTAAATTACCCAAGTGGCAGTGTTGCAGCGGGTGCGGGCAGTGTGGGAATTGTTTCACTTGTCCAACGCTACCCAGATGCTCGTGCTGTTGTCCAACCGTCTCATGCAGCCAATGTTGTAGCGGTTGTTCATTACCTTCCTGCTCCTGCCTTGAATGCCCTTGCTGTGAATGCAAATGCAAATGCAAATGCTCATTAG

mRNA sequence

ATGTTTGTGGAGCAGGAAGAATTGAAGTCTACCGAAGGCCTTCCACCTGCTTCTAGATGCTGCAAAGAGGTAGCTGACCATGTGATCGCCAACTCAGATCCCTTGATACCAACATACAAGAAGCATCGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTCTGTAAATTACCCAAGTGGCAGTGTTGCAGCGGGTGCGGGCAGTGTGGGAATTGTTTCACTTGTCCAACGCTACCCAGATGCTCGTGCTGTTGTCCAACCGTCTCATGCAGCCAATGTTGTAGCGGTTGTTCATTACCTTCCTGCTCCTGCCTTGAATGCCCTTGCTGTGAATGCAAATGCAAATGCAAATGCTCATTAG

Coding sequence (CDS)

ATGTTTGTGGAGCAGGAAGAATTGAAGTCTACCGAAGGCCTTCCACCTGCTTCTAGATGCTGCAAAGAGGTAGCTGACCATGTGATCGCCAACTCAGATCCCTTGATACCAACATACAAGAAGCATCGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTGTTCTGTAAATTACCCAAGTGGCAGTGTTGCAGCGGGTGCGGGCAGTGTGGGAATTGTTTCACTTGTCCAACGCTACCCAGATGCTCGTGCTGTTGTCCAACCGTCTCATGCAGCCAATGTTGTAGCGGTTGTTCATTACCTTCCTGCTCCTGCCTTGAATGCCCTTGCTGTGAATGCAAATGCAAATGCAAATGCTCATTAG

Protein sequence

MFVEQEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCSVNYPSGSVAAGAGSVGIVSLVQRYPDARAVVQPSHAANVVAVVHYLPAPALNALAVNANANANAH

Homology

[Close]

BLAST of Csor.00g241710 vs. ExPASy Swiss-Prot
Match: Q6AWT8 (Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=3702 GN=GG3 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.3e-14
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 7   ELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 58
           E+K  EG+ PASRC KEV+D V+ANSDPLIP  +K RR  +FWKWLCG PC
Sbjct: 67  EIKFIEGVQPASRCIKEVSDFVVANSDPLIPAQRKSRRSFRFWKWLCG-PC 116

[Close]

BLAST of Csor.00g241710 vs. NCBI nr
Match: KAG6599538.1 (Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252 bits (644), Expect = 1.40e-84
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MFVEQEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCSVN 60
           MFVEQEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCSVN
Sbjct: 1   MFVEQEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCSVN 60

Query: 61  YPSGSVAAGAGSVGIVSLVQRYPDARAVVQPSHAANVVAVVHYLPAPALNALAVNANANA 120
           YPSGSVAAGAGSVGIVSLVQRYPDARAVVQPSHAANVVAVVHYLPAPALNALAVNANANA
Sbjct: 61  YPSGSVAAGAGSVGIVSLVQRYPDARAVVQPSHAANVVAVVHYLPAPALNALAVNANANA 120

Query: 121 NAH 123
           NAH
Sbjct: 121 NAH 123

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BLAST of Csor.00g241710 vs. NCBI nr
Match: KAG7030517.1 (Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 170 bits (431), Expect = 5.12e-51
Identity = 100/153 (65.36%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPT-------------------------- 64
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPT                          
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTSIAADVNFGNGSVDSPVVNYPGFAVA 110

Query: 65  --------YKKHRRRCQFWKWLCGFPCSVNYPSGSVAAGAGSVGIVSLVQRYPDARAVVQ 123
                    K H               +VNYPSGSVAAGAGSVGIVSLVQRYPDARAVVQ
Sbjct: 111 VMLDARSILKSHPAATVIIHVNAYRVAAVNYPSGSVAAGAGSVGIVSLVQRYPDARAVVQ 170

[Close]

BLAST of Csor.00g241710 vs. NCBI nr
Match: KAA0061462.1 (guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa] >TYK10812.1 guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (403), Expect = 2.89e-46
Identity = 93/174 (53.45%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLC----------- 64
           +EELKSTEGL PAS+CCKEVAD+VIANSDP+IPTYKKHRRRCQFWKWLC           
Sbjct: 52  EEELKSTEGLQPASKCCKEVADYVIANSDPMIPTYKKHRRRCQFWKWLCNKALPKIWLIA 111

Query: 65  ----------------GFP----------------------------CSVNYPSGSVAAG 122
                           GF                              +VNY SG V   
Sbjct: 112 IINLKLEVDSPVVSYPGFAVAVMLDARSISKSLPAATVITLVNAYRVAAVNYRSGCVVGS 171

[Close]

BLAST of Csor.00g241710 vs. NCBI nr
Match: XP_022999343.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 122 bits (306), Expect = 1.18e-31
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. NCBI nr
Match: XP_022946452.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 122 bits (306), Expect = 1.18e-31
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL
Match: A0A5A7UZX5 (Guanine nucleotide-binding protein subunit gamma 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001280 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.40e-46
Identity = 93/174 (53.45%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLC----------- 64
           +EELKSTEGL PAS+CCKEVAD+VIANSDP+IPTYKKHRRRCQFWKWLC           
Sbjct: 52  EEELKSTEGLQPASKCCKEVADYVIANSDPMIPTYKKHRRRCQFWKWLCNKALPKIWLIA 111

Query: 65  ----------------GFP----------------------------CSVNYPSGSVAAG 122
                           GF                              +VNY SG V   
Sbjct: 112 IINLKLEVDSPVVSYPGFAVAVMLDARSISKSLPAATVITLVNAYRVAAVNYRSGCVVGS 171

[Close]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL
Match: A0A6J1KJF9 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 5.69e-32
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL
Match: A0A6J1G3S6 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 5.69e-32
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL
Match: A0A6J1KGS0 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 7.24e-32
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL
Match: A0A6J1G3W8 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 7.24e-32
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 5   QEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 57
           +EELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC
Sbjct: 51  EEELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 103

[Close]

BLAST of Csor.00g241710 vs. TAIR 10
Match: AT5G20635.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 5.2e-15
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 7   ELKSTEGLPPASRCCKEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPC 58
           E+K  EG+ PASRC KEV+D V+ANSDPLIP  +K RR  +FWKWLCG PC
Sbjct: 67  EIKFIEGVQPASRCIKEVSDFVVANSDPLIPAQRKSRRSFRFWKWLCG-PC 116

The following BLAST results are available for this feature:

BLAST of Csor.00g241710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWT8	7.3e-14	66.67	Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Csor.00g241710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599538.1	1.40e-84	100.00	Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrospe...	[more]
KAG7030517.1	5.12e-51	65.36	Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrospe...	[more]
KAA0061462.1	2.89e-46	53.45	guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuw...	[more]
XP_022999343.1	1.18e-31	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita ma...	[more]
XP_022946452.1	1.18e-31	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita mo...	[more]

BLAST of Csor.00g241710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZX5	1.40e-46	53.45	Guanine nucleotide-binding protein subunit gamma 3-like OS=Cucumis melo var. mak...	[more]
A0A6J1KJF9	5.69e-32	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1G3S6	5.69e-32	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1KGS0	7.24e-32	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1G3W8	7.24e-32	98.11	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ...	[more]

BLAST of Csor.00g241710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20635.1	5.2e-15	66.67	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015898	G-protein gamma-like domain	PFAM	PF00631	G-gamma	coord: 5..59 e-value: 4.3E-7 score: 29.8
None	No IPR available	PANTHER	PTHR32378	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 5..59
None	No IPR available	PANTHER	PTHR32378:SF11	GGL DOMAIN PROTEIN	coord: 5..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g241710.m01	Csor.00g241710.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway