Csor.00g241370 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTTGGACTTCCAGACACCGACACCCCAGGGGTTCCCAATCCCGACGACTTCATAAGCATGCACCATCACCACCACCACCACCACCACAATCTCAACCCCCACCATTATTACTTTCTCCACGCCGCTGATTCCAAACCCGCCTTCCCTTCCTCCAATGCCACTCCCTATGACGCGGCCCCCCAGGAGCAGCGCATGCTGGAGTACACGCGGTCACTATCTCAGGGGACGGCGAGGCGATTGGTGCCCGCGGCCACGTATTTGGCGGTGCTGGTGTCCCTGGCGGCGTCGCTGTTGATCCTCCCGTTGATTCTACCGCCGTTGCCGGCGCCGCCGTTGATGCTGCTGTTGCTTCTTCCCATTGGTATTTTGGGAATGCTGATGGTGTTGGCGTTTATGCCTTCGAATGACGCCAAGGATATTGGTTCCTCTCATACATATATGTAA ATGAGTCTTGGACTTCCAGACACCGACACCCCAGGGGTTCCCAATCCCGACGACTTCATAAGCATGCACCATCACCACCACCACCACCACCACAATCTCAACCCCCACCATTATTACTTTCTCCACGCCGCTGATTCCAAACCCGCCTTCCCTTCCTCCAATGCCACTCCCTATGACGCGGCCCCCCAGGAGCAGCGCATGCTGGAGTACACGCGGTCACTATCTCAGGGGACGGCGAGGCGATTGGTGCCCGCGGCCACGTATTTGGCGGTGCTGGTGTCCCTGGCGGCGTCGCTGTTGATCCTCCCGTTGATTCTACCGCCGTTGCCGGCGCCGCCGTTGATGCTGCTGTTGCTTCTTCCCATTGGTATTTTGGGAATGCTGATGGTGTTGGCGTTTATGCCTTCGAATGACGCCAAGGATATTGGTTCCTCTCATACATATATGTAA ATGAGTCTTGGACTTCCAGACACCGACACCCCAGGGGTTCCCAATCCCGACGACTTCATAAGCATGCACCATCACCACCACCACCACCACCACAATCTCAACCCCCACCATTATTACTTTCTCCACGCCGCTGATTCCAAACCCGCCTTCCCTTCCTCCAATGCCACTCCCTATGACGCGGCCCCCCAGGAGCAGCGCATGCTGGAGTACACGCGGTCACTATCTCAGGGGACGGCGAGGCGATTGGTGCCCGCGGCCACGTATTTGGCGGTGCTGGTGTCCCTGGCGGCGTCGCTGTTGATCCTCCCGTTGATTCTACCGCCGTTGCCGGCGCCGCCGTTGATGCTGCTGTTGCTTCTTCCCATTGGTATTTTGGGAATGCTGATGGTGTTGGCGTTTATGCCTTCGAATGACGCCAAGGATATTGGTTCCTCTCATACATATATGTAA MSLGLPDTDTPGVPNPDDFISMHHHHHHHHHNLNPHHYYFLHAADSKPAFPSSNATPYDAAPQEQRMLEYTRSLSQGTARRLVPAATYLAVLVSLAASLLILPLILPPLPAPPLMLLLLLPIGILGMLMVLAFMPSNDAKDIGSSHTYM Homology
BLAST of Csor.00g241370 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Csor.00g241370 vs. NCBI nr
Match: KAG6601768.1 (hypothetical protein SDJN03_07001, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 283 bits (723), Expect = 8.74e-96 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g241370 vs. NCBI nr
Match: XP_023514167.1 (ARGOS-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254 bits (648), Expect = 2.82e-84 Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Csor.00g241370 vs. NCBI nr
Match: XP_022974015.1 (ARGOS-like protein [Cucurbita maxima] >XP_022974016.1 ARGOS-like protein [Cucurbita maxima]) HSP 1 Score: 244 bits (622), Expect = 1.91e-80 Identity = 133/147 (90.48%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of Csor.00g241370 vs. NCBI nr
Match: XP_022930113.1 (ARGOS-like protein [Cucurbita moschata]) HSP 1 Score: 214 bits (544), Expect = 9.26e-69 Identity = 126/151 (83.44%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Csor.00g241370 vs. NCBI nr
Match: KGN61450.1 (hypothetical protein Csa_006551 [Cucumis sativus]) HSP 1 Score: 149 bits (377), Expect = 3.72e-43 Identity = 92/153 (60.13%), Postives = 110/153 (71.90%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy TrEMBL
Match: A0A6J1ICV1 (ARGOS-like protein OS=Cucurbita maxima OX=3661 GN=LOC111472634 PE=3 SV=1) HSP 1 Score: 244 bits (622), Expect = 9.26e-81 Identity = 133/147 (90.48%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy TrEMBL
Match: A0A6J1EU41 (ARGOS-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436595 PE=3 SV=1) HSP 1 Score: 214 bits (544), Expect = 4.49e-69 Identity = 126/151 (83.44%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy TrEMBL
Match: A0A0A0LHQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123610 PE=3 SV=1) HSP 1 Score: 149 bits (377), Expect = 1.80e-43 Identity = 92/153 (60.13%), Postives = 110/153 (71.90%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy TrEMBL
Match: A0A2C9VY78 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G208400 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 9.01e-18 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Csor.00g241370 vs. ExPASy TrEMBL
Match: A0A067K392 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19251 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.60e-17 Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Csor.00g241370 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Csor.00g241370 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size ) HSP 1 Score: 54.3 bits (129), Expect = 9.7e-08 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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