Csor.00g239190 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g239190
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Endoplasmic reticulum transmembrane protein
Location	Csor_Chr04: 343405 .. 343797 (-)
RNA-Seq Expression	Csor.00g239190
Synteny	Csor.00g239190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGGAATGGGTCGTTCTTGGCTACGCCGCTGCGGCTGAGGCAATCATGCTCCTTCTCCTCACCATCCCAGGCCTCGATGGTCTCCGGAAGGGCCTAATTGCTGTTACTCGCAATCTTCTCAAGCCATTCCTCTCCGTCGTTCCCTTTTGCCTCTTCTTGCTCATGGATATCTACTGGAAATACGAAACTCTCCCCAGTTGCGAATCCGACTCATGCACCCCTTCTGAGTTCCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAATGCGCTCTTGATCGCTTCGGCGCTTGTGTTCTACTGGCTGTTGTACTCTGTCACCCATTTGCTTGTCAAGGTTGAGCAATTGAACCAGCGTATTGAGAGGTTGAAGAATCGGGATTGA

mRNA sequence

ATGGCATTGGAATGGGTCGTTCTTGGCTACGCCGCTGCGGCTGAGGCAATCATGCTCCTTCTCCTCACCATCCCAGGCCTCGATGGTCTCCGGAAGGGCCTAATTGCTGTTACTCGCAATCTTCTCAAGCCATTCCTCTCCGTCGTTCCCTTTTGCCTCTTCTTGCTCATGGATATCTACTGGAAATACGAAACTCTCCCCAGTTGCGAATCCGACTCATGCACCCCTTCTGAGTTCCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAATGCGCTCTTGATCGCTTCGGCGCTTGTGTTCTACTGGCTGTTGTACTCTGTCACCCATTTGCTTGTCAAGGTTGAGCAATTGAACCAGCGTATTGAGAGGTTGAAGAATCGGGATTGA

Coding sequence (CDS)

ATGGCATTGGAATGGGTCGTTCTTGGCTACGCCGCTGCGGCTGAGGCAATCATGCTCCTTCTCCTCACCATCCCAGGCCTCGATGGTCTCCGGAAGGGCCTAATTGCTGTTACTCGCAATCTTCTCAAGCCATTCCTCTCCGTCGTTCCCTTTTGCCTCTTCTTGCTCATGGATATCTACTGGAAATACGAAACTCTCCCCAGTTGCGAATCCGACTCATGCACCCCTTCTGAGTTCCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAATGCGCTCTTGATCGCTTCGGCGCTTGTGTTCTACTGGCTGTTGTACTCTGTCACCCATTTGCTTGTCAAGGTTGAGCAATTGAACCAGCGTATTGAGAGGTTGAAGAATCGGGATTGA

Protein sequence

MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIYWKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLNQRIERLKNRD

Homology

[Close]

BLAST of Csor.00g239190 vs. NCBI nr
Match: XP_022943230.1 (uncharacterized protein LOC111448022 [Cucurbita moschata] >XP_023002259.1 uncharacterized protein LOC111496138 [Cucurbita maxima] >XP_023527051.1 uncharacterized protein LOC111790398 [Cucurbita pepo subsp. pepo] >KAG6599911.1 hypothetical protein SDJN03_05144, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030590.1 hypothetical protein SDJN02_04627, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (640), Expect = 9.61e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN
Sbjct: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QRIERLKNRD
Sbjct: 121 QRIERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. NCBI nr
Match: XP_022153951.1 (uncharacterized protein LOC111021338 [Momordica charantia])

HSP 1 Score: 244 bits (624), Expect = 2.65e-81
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET PSCESDSCTPSEFLRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. NCBI nr
Match: XP_022942023.1 (uncharacterized protein LOC111447211 [Cucurbita moschata] >XP_022975389.1 uncharacterized protein LOC111474653 [Cucurbita maxima] >XP_023548406.1 uncharacterized protein LOC111807049 [Cucurbita pepo subsp. pepo] >XP_038891765.1 uncharacterized protein LOC120081154 [Benincasa hispida] >KAG6600838.1 hypothetical protein SDJN03_06071, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031473.1 hypothetical protein SDJN02_05513, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241 bits (616), Expect = 4.40e-80
Identity = 122/130 (93.85%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLT+PGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET P+CESDSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. NCBI nr
Match: KAA0040998.1 (Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa] >TYK20348.1 Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (614), Expect = 8.88e-80
Identity = 121/130 (93.08%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLT+PGLDGLRKGLIAVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET P+CESDSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. NCBI nr
Match: XP_004142369.2 (uncharacterized protein LOC101213354 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 1.26e-79
Identity = 120/130 (92.31%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLT+PGLDGLRKGL+AVTRNLLKPFLSVVPFC+FLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCIFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET P+CESDSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL
Match: A0A6J1KPY1 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111496138 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.65e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN
Sbjct: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QRIERLKNRD
Sbjct: 121 QRIERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL
Match: A0A6J1FXK2 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111448022 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.65e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN
Sbjct: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QRIERLKNRD
Sbjct: 121 QRIERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL
Match: A0A6J1DM88 (Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LOC111021338 PE=3 SV=1)

HSP 1 Score: 244 bits (624), Expect = 1.28e-81
Identity = 125/130 (96.15%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET PSCESDSCTPSEFLRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL
Match: A0A6J1IKB0 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111474653 PE=3 SV=1)

HSP 1 Score: 241 bits (616), Expect = 2.13e-80
Identity = 122/130 (93.85%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLT+PGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET P+CESDSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL
Match: A0A6J1FTP8 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111447211 PE=3 SV=1)

HSP 1 Score: 241 bits (616), Expect = 2.13e-80
Identity = 122/130 (93.85%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM+LLLT+PGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET P+CESDSCTPSE+LRHQKSIMKSQRNALLIA+ALVFYWLLYSVTHL+VKVEQLN
Sbjct: 61  WKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVTHLVVKVEQLN 120

Query: 121 QRIERLKNRD 130
           QR+ERLKNRD
Sbjct: 121 QRVERLKNRD 130

[Close]

BLAST of Csor.00g239190 vs. TAIR 10
Match: AT3G03160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-60
Identity = 112/130 (86.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM++LLT+PGLDGLRKGL+AVTRNLLKPFLS+VPFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVVLLTMPGLDGLRKGLVAVTRNLLKPFLSIVPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET+PSC+ DSCTPSE LRHQKS+MKSQRNALLIA+ALVFYW+LYSVT+L+VK+E LN
Sbjct: 61  WKYETMPSCDGDSCTPSEHLRHQKSMMKSQRNALLIAAALVFYWILYSVTNLVVKIEHLN 120

Query: 121 QRIERLKNRD 131
           QRIERL+N+D
Sbjct: 121 QRIERLRNKD 130

[Close]

BLAST of Csor.00g239190 vs. TAIR 10
Match: AT5G17190.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-60
Identity = 112/130 (86.15%), Postives = 126/130 (96.92%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MALEWVVLGYAAAAEAIM++LLT+PGLD LRKGL+AVTRNLLKPFLS++PFCLFLLMDIY
Sbjct: 1   MALEWVVLGYAAAAEAIMVILLTMPGLDALRKGLVAVTRNLLKPFLSIIPFCLFLLMDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WKYET PSC+ DSCTPSE LRHQKSIMKSQRNALLIASALVFYW+LYSVT+L+V++EQLN
Sbjct: 61  WKYETRPSCDGDSCTPSEHLRHQKSIMKSQRNALLIASALVFYWILYSVTNLVVRIEQLN 120

Query: 121 QRIERLKNRD 131
           QR+ERLKN+D
Sbjct: 121 QRVERLKNKD 130

[Close]

BLAST of Csor.00g239190 vs. TAIR 10
Match: AT1G48440.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 94.4 bits (233), Expect = 7.4e-20
Identity = 50/127 (39.37%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MAL+W++L Y  A E ++ L+LT+P    L+K ++ +   +L+P  S+V F  F L+DIY
Sbjct: 1   MALQWLILSYVVAVEVVITLVLTLPYPMLLKKRVVQLVSLILQPAASIVAFAGFQLLDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WK E   SC S+ CT +E  R++KSI K+QRN +L A+ ++ YW +Y +      +E+L 
Sbjct: 61  WKAEHRLSCSSEVCTATERDRYEKSIYKAQRNVVLCAAGILLYWCIYRICKYNKDLERLE 120

Query: 121 QRIERLK 128
              +R K
Sbjct: 121 ATEKRFK 127

[Close]

BLAST of Csor.00g239190 vs. TAIR 10
Match: AT3G17780.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 9.7e-20
Identity = 49/128 (38.28%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 1   MALEWVVLGYAAAAEAIMLLLLTIPGLDGLRKGLIAVTRNLLKPFLSVVPFCLFLLMDIY 60
           MAL+W++L Y  AAE  + ++LT+P    L+K ++++   +L P  S+V F  F L+DIY
Sbjct: 1   MALQWLILSYVVAAEVAIAVILTLPYPMLLKKRIVSLISLILNPAASIVAFAGFQLLDIY 60

Query: 61  WKYETLPSCESDSCTPSEFLRHQKSIMKSQRNALLIASALVFYWLLYSVTHLLVKVEQLN 120
           WK E    C S+ CT +E  RH+KS+ K+QRN +L A+ ++ YW ++ +      +E+L 
Sbjct: 61  WKNEHRLLCSSEVCTTTERDRHEKSVYKAQRNGVLCAAGILLYWCIFRICKYHKDLERLE 120

Query: 121 QRIERLKN 129
           Q  +R K+
Sbjct: 121 QLEKRYKD 128

The following BLAST results are available for this feature:

BLAST of Csor.00g239190 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g239190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943230.1	9.61e-84	100.00	uncharacterized protein LOC111448022 [Cucurbita moschata] >XP_023002259.1 unchar...	[more]
XP_022153951.1	2.65e-81	96.15	uncharacterized protein LOC111021338 [Momordica charantia]	[more]
XP_022942023.1	4.40e-80	93.85	uncharacterized protein LOC111447211 [Cucurbita moschata] >XP_022975389.1 unchar...	[more]
KAA0040998.1	8.88e-80	93.08	Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa] >TYK20348...	[more]
XP_004142369.2	1.26e-79	92.31	uncharacterized protein LOC101213354 [Cucumis sativus]	[more]

BLAST of Csor.00g239190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPY1	4.65e-84	100.00	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FXK2	4.65e-84	100.00	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1DM88	1.28e-81	96.15	Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1IKB0	2.13e-80	93.85	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FTP8	2.13e-80	93.85	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Csor.00g239190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03160.1	1.5e-60	86.15	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT5G17190.1	1.5e-60	86.15	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]
AT1G48440.1	7.4e-20	39.37	B-cell receptor-associated 31-like	[more]
AT3G17780.1	9.7e-20	38.28	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein tra...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	PANTHER	PTHR12701:SF38	B-CELL RECEPTOR-ASSOCIATED-LIKE PROTEIN	coord: 1..130
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g239190.m01	Csor.00g239190.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070973	protein localization to endoplasmic reticulum exit site
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum