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Csor.00g238450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCGTATGTTTTTTTCACCTTACTGTTTTTATTTTGTTGTTATCGCTTCTTTGTGCTTGTGCTTTCCGTTTTTCTATTTATAGCTCATTTTTCTCTTTGTTAAACTCATAACCAATTCCTAGTAGATTGTCCTATTCAACTCATTGTTTTTGGTTTGGAGGCTTTCGAAGTCTTTGGTTGGGTGATACTATTTATGCGCCTTGTGTCCCCTCCTCGATCTTTTTCCACCTCGTACTTCTCTGCGTTCTTGATCTTATTACTACTGACTCCAGAATTCTGGGAACTTAACATCAGTAAGCCTCCTTTGGGGATTAGACAACTTAGGGCTCATTTGAAAATGTTTTTATTTTTAATATTATGATAATTTACTGAACGTACTTCTTTTTTTGTTAATTTAATAAGAAAAATGTATCTGTTTTATTTTTGAGATTTGAATGATTTCTAAACCTCTTTATAAAAACTGAAAATTTAAACCCAGAAATGTAGGTGAACTTAAATTTTTAACAACTCAAAACTTTAAGCAGATTAAATACTGTGAATCCTTGGGGATAGGTTTATCTGCTAAATTTACCTATTAAACTGGAATTCACTAGCACTAGAAAACCTTGTAGCGTACAAGTCTTAACATATCCCTACTTAAGCAGTGAAGTTGGTCCTAAATTTGGAGGTTTTGTACCGGTAATGTTGCAATATCACTTGAAGTTGATACCATTTATTCAATATCTGCATTATGATGTTTATTCTATACATCAGCATTATGATATCTTCTTTGATTTCTACTTACTATCAGAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGGTATGGAAAAGCCAGCACATAGCTCTTTGAGCATGTGGGAGCTTCTCTTGTTGCTTTATGAAAAAACTACAGTTTGTGTCATGCATCCTCAGTCTCTTCATTAAATACTGGAACAGTAAATTCATTTAGATGTTGGCCAAACTAAACACATAAATTGAGAAAAACTGATGTTCAATCAACATGCTTCCTATTTTGTTAATGTTCTTTGTGAATCTTTATTACAGCTCATTACAAAATGGAGCTATTCTTGCAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGGTTAGTTCATTGTTATTTTATCTTTCAAACTTAGGACATGAATGCATTTAGTGAAGGAAGTACTTGTATAAATTTTGATGGTTAGCAGATTAAGCGAATTAGTTTACATTGGTTTTGATTGAGGTTGCAAAACTTAGGACATGAGGTTGCCAAATCATAAGCTAGCAGATTTGCTGTTCTGCTGTGGTGAGACGTAAGGCAAGATAATTTGGTGGATTGCTGTCTGCATTTTTTTAGGAAATTAGGGAACGTTGGTGTAGGATTATTAGAGAAGCTTTGACAGATGCCTCTATCCGCCTCAAATGCCATTTTTTTTCCACGAGTACTGTTTACCACATTGCTTGCAGTTCAATTTTATAATTGAATAATTCAAATAATTTATCATTCAAAATAGTTATTTGTATGGAGGCATCACACATTGTCTATTATTTTCTTGTCAACAACCTTGGTCAAAATTTTAGAAAACATTTTAAGTTTTTACTTTCATGCTGGATTGAGTGCTGACTTTGAACTTGAAGCAGAAAAGTAGTTTTTTTATATTTGTATTTTTTTAATTTAGAATGTGAGATAACTCTGAGTATCATCATTTCTAACTGCTCTAGGTTTCCTTATGTTCAATTTCAAGAGCATTGAGAGGATTGAAAATTGTTGGGATATATATATATGGACAGAATAGTATACGTTTTTTCTTTTTCTTTTTTTTTTAATAAAAAAAAAAGAAACTGGGAAATATATGCATTGGCTTATAGATTTAAGATGCCTTGTCATTATCTCATAATTGCCTTGAACGAAGATGTTGGAAAACTATTTGATTGTTGAGAATTTTGTGGTCATGTTGCTTGTTGACGAAAGTGTACTTTTAAAATGTGTCTTTTCTCATGGGACTTCCGAACCAGCTTTTCCTTGGAATTGATCATTTTTTCTATGCCAGCGAGTTACATGTATCACTTATTGATACTGTAAGATGGAACTTTTCCAGCCATCTTTATTATTGCTCTAAATATTTCTTTGGAGATTAGTGTTTACAGTGGTTTTGAATTTAATTGATCTTGTGCTTATTACATTATTTTCATTTTCAGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTAAGTTCTCCCGTTTTCTTATCGGAATGTGGCACTACCTAAGTATATAATTTAGGAGCAAATGATGATTTATTGGGGGGGGGGGGGGGAGTAATTCTTGCCTGAGAATGGAAGTAATGGGTAAGAAACAAATTTTCCCTCTTGGGAAAATATTTCTGTTTCAATTTCTAGGATGTGGGTGCAGAATATATCCACTACCTTGATTCCAACTCTTCCTAATTTTGTACATATTGGATAGTCACTGGAAGTTTGGTTTTCCAATTGAAAAATGGTAGTACCTTTTGATTCATATATTAGTGAATGCTTCAATATATATATATATATCTTTTCTTTACAAATCTAAGCATGAGAAATCAATTTTTTTAATCTCTTATTTATGTTCTAGTATCTTGTTTTTCTATGGGAATGATGTGTCATAAATTATTGATTCTATTTTGATAGCGGAAGTAGCTGTCAGATGACAAAATAAAAGCAAATGAAGAGGGGTGGGTGTCAGATCCTAGTTGCTTGTTATACTTGCCTTTGTAATTGATTTCCCCTTGTAATTTACTTATTGGAGGTGTTCTTGTTTTTCTCCAAAAGGGGAGTGCCGAATCATAACATTGGTCAAACCTGTTCACTGTATTAATGACAAGTGTTGCCTATTAGAAAAAGAATAAAGGTATAACAATCGAGTCAGTTAGATTTTGATCTCATGCTAATGGTGTGAAGTCACTTCTTTTATTATTATTTTTTTTCACAATGAAACATATGGTTTCTCATATTTAAAAAATATTGCCCAGCCACTGGAATCATTAGTTCCCTTTTTTCAAATGACTGAACGTGGTTCACATAATTCAGCATATTCAATGGTTTGCTCTCAGTATATTGGAATCAAATTGGTGTGAGTTTCTAATGTTTTATTGCTCAATGAATTACAGGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCTGATGGCCTCATGTAAGCTATATTTTCCGTATCTGTAGGCATTCATAGAAAAATTCCCTGGTTGCCTATAGGGGAGGGACTGCTGATATCTACTCCAAAGGGAAGAAATTCCTCTAGGACTTTCCTGTTAAAGAAACAACTGTTGAATTAAGCTTATAATTTAAGAATGTTTTTAAAGCAAGGTTCTTATCATTTTTTAAAATGTTTTTTTTTATGCGAGGCTAACGCTCATGTGGTGATGAATGAGGTTATGAAAATCTGCCTCACCCGGCAGCAAGCTTCTTATTTTATGTGCTTGGAATTCTACACAGTATCTATTTTTCTCATTCGATTGGCATGCCTTTGTGCTGTAGCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGAAGAACTACCTGAAACGTGTGATTTTATCATTTGTATCCCCTTTGTTCTAATGCTTAGCTTTGACCCGTAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAGTATGTTCAACGTTGAAATTATACCTTATGGTTAAAAGTATATTCTGAGTCTAGCCTGATTAGTAGAATTTCCTGGGTATTCTTTTAACTTTTCCTCATTAAATTTCCAGACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTAATTTTGGTTTTGTGTCTGGGACACCCCTCCCCCCCACAAATAAAAAGAAAGAAAAACGTGATTTTGGTTTTCTTAGTGGGACTAACCCCTCCCTTCCCCCTTTGGAAAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGGTAAATTCTGCTGTTTATTTTGTTATACCTTGAAAGAACAGTTCCAGATGATGGATAATATTTGGTGTGTTTTGTAATAACAAGTTTGATATGTGTAACTTTTCAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCTGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA ATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATTGTGAAATTCGTGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCTGATGATAATGTTCTGATGGCCTCATCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTGATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA MASALQMTPQLEQIHCEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREIKDEETKSSPEVHKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVLMASSMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPAPARRLLYLRTPEHFE Homology
BLAST of Csor.00g238450 vs. ExPASy Swiss-Prot
Match: Q9LRP1 (Novel plant SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=NPSN13 PE=1 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 7.9e-114 Identity = 217/268 (80.97%), Postives = 247/268 (92.16%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy Swiss-Prot
Match: Q9LNH6 (Novel plant SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=NPSN12 PE=2 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-110 Identity = 210/264 (79.55%), Postives = 242/264 (91.67%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy Swiss-Prot
Match: Q944A9 (Novel plant SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=NPSN11 PE=1 SV=2) HSP 1 Score: 318.2 bits (814), Expect = 9.2e-86 Identity = 173/258 (67.05%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Csor.00g238450 vs. NCBI nr
Match: KAG6594039.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508 bits (1308), Expect = 4.94e-181 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Csor.00g238450 vs. NCBI nr
Match: KAG7021089.1 (putative plant SNARE 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 506 bits (1302), Expect = 4.05e-180 Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Csor.00g238450 vs. NCBI nr
Match: XP_023513592.1 (novel plant SNARE 13-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 500 bits (1287), Expect = 7.84e-178 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Csor.00g238450 vs. NCBI nr
Match: XP_022930215.1 (novel plant SNARE 13-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 500 bits (1287), Expect = 7.84e-178 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Csor.00g238450 vs. NCBI nr
Match: XP_023000437.1 (novel plant SNARE 13-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 496 bits (1278), Expect = 1.85e-176 Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy TrEMBL
Match: A0A6J1EWD1 (novel plant SNARE 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436737 PE=4 SV=1) HSP 1 Score: 500 bits (1287), Expect = 3.80e-178 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy TrEMBL
Match: A0A6J1KDM4 (novel plant SNARE 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494705 PE=4 SV=1) HSP 1 Score: 496 bits (1278), Expect = 8.94e-177 Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy TrEMBL
Match: A0A6J1CB99 (novel plant SNARE 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009926 PE=4 SV=1) HSP 1 Score: 481 bits (1239), Expect = 8.14e-171 Identity = 256/269 (95.17%), Postives = 263/269 (97.77%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy TrEMBL
Match: A0A5D3BXM9 (Putative plant SNARE 13 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00740 PE=4 SV=1) HSP 1 Score: 476 bits (1225), Expect = 1.07e-168 Identity = 252/268 (94.03%), Postives = 259/268 (96.64%), Query Frame = 0
BLAST of Csor.00g238450 vs. ExPASy TrEMBL
Match: A0A1S3C842 (novel plant SNARE 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497752 PE=4 SV=1) HSP 1 Score: 476 bits (1225), Expect = 1.07e-168 Identity = 252/268 (94.03%), Postives = 259/268 (96.64%), Query Frame = 0
BLAST of Csor.00g238450 vs. TAIR 10
Match: AT3G17440.1 (novel plant snare 13 ) HSP 1 Score: 411.4 bits (1056), Expect = 5.6e-115 Identity = 217/268 (80.97%), Postives = 247/268 (92.16%), Query Frame = 0
BLAST of Csor.00g238450 vs. TAIR 10
Match: AT1G48240.1 (novel plant snare 12 ) HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-111 Identity = 210/264 (79.55%), Postives = 242/264 (91.67%), Query Frame = 0
BLAST of Csor.00g238450 vs. TAIR 10
Match: AT3G17440.2 (novel plant snare 13 ) HSP 1 Score: 320.5 bits (820), Expect = 1.3e-87 Identity = 171/212 (80.66%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of Csor.00g238450 vs. TAIR 10
Match: AT2G35190.1 (novel plant snare 11 ) HSP 1 Score: 318.2 bits (814), Expect = 6.5e-87 Identity = 173/258 (67.05%), Postives = 212/258 (82.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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