Csor.00g237380 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g237380
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr08: 7623567 .. 7624157 (-)
RNA-Seq Expression	Csor.00g237380
Synteny	Csor.00g237380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTATAACTATAATTCTAGATCCAACCGGAAATCTGCGGCTAGGTCGGATAGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCAGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGATCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

mRNA sequence

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTATAACTATAATTCTAGATCCAACCGGAAATCTGCGGCTAGGTCGGATAGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCAGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGATCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

Coding sequence (CDS)

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCACTGGTGGCCTTTTGTCGTCGCCGGGGTTCTTATGGAAACTCTGATTCGAATGTTTATAACTATAATTCTAGATCCAACCGGAAATCTGCGGCTAGGTCGGATAGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCAGAGCCATCGGTCTCGAAGAGATCGAGTTCCGAGGATTCGAAGATCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATCGTCGACGTTAGGTGTCCGATTGTTGGAAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGACGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

Protein sequence

MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIVDDSATRDLRRLLRLDA

Homology

[Close]

BLAST of Csor.00g237380 vs. NCBI nr
Match: KAG6593932.1 (hypothetical protein SDJN03_13408, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026274.1 hypothetical protein SDJN02_12774, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (950), Expect = 7.45e-129
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. NCBI nr
Match: XP_022930480.1 (uncharacterized protein LOC111436920 [Cucurbita moschata])

HSP 1 Score: 365 bits (936), Expect = 1.02e-126
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNV NYNSRSNRKSAARSDRPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVCNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRSSSEDSK RTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. NCBI nr
Match: XP_023514741.1 (uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360 bits (924), Expect = 6.85e-125
Identity = 191/196 (97.45%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNV+NYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVHNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRSSSEDSK RTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. NCBI nr
Match: XP_023000029.1 (uncharacterized protein LOC111494337 [Cucurbita maxima])

HSP 1 Score: 352 bits (902), Expect = 1.55e-121
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNV NYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSK RTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. NCBI nr
Match: KAG6575030.1 (hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013605.1 hypothetical protein SDJN02_23772, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314 bits (805), Expect = 9.37e-107
Identity = 170/196 (86.73%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCL  RI VP   FCRRR SYGN DSNV NYNSRSNRK+AARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLIERIRVPPAPFCRRRSSYGNYDSNVCNYNSRSNRKTAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSN SEPSVSKRSSS+D K   NSLVME VTILRRGESLDSK K EALKKE DNLVVCG
Sbjct: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEM+ KQIRIVDVRCPI GKADVYAGSAFSMSP PSSLPLPSFSKKK VSTIV
Sbjct: 121 TERLGPAPEMIPKQIRIVDVRCPISGKADVYAGSAFSMSPCPSSLPLPSFSKKKHVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL
Match: A0A6J1EX01 (uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC111436920 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 4.92e-127
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNV NYNSRSNRKSAARSDRPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVCNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRSSSEDSK RTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL
Match: A0A6J1KIS0 (uncharacterized protein LOC111494337 OS=Cucurbita maxima OX=3661 GN=LOC111494337 PE=4 SV=1)

HSP 1 Score: 352 bits (902), Expect = 7.49e-122
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNV NYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSK RTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 196
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL
Match: A0A5A7SWA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001050 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 7.87e-102
Identity = 167/200 (83.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYN-YNSRSNRKSAARSDR---PE 60
           MGTEILRPQDCL  RI VP  AFCRRR SYGN DSN+ N YN RSNRKS ARS+R   PE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNL 120
           QRKRFV N SEPSVSKRSSS+D K   NSLVME VTILRRGESLDSK K EALKKE DN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQV 180
           VVCGT+RLGPAPE V KQIRIVDVRCPI GKADVYAGSAFSMSPSPSSLPLPSFSKKK V
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 196
           STIVDDSATRDLRRLLRLDA
Sbjct: 181 STIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL
Match: A0A1S3C7J3 (uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 7.87e-102
Identity = 167/200 (83.50%), Postives = 172/200 (86.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYN-YNSRSNRKSAARSDR---PE 60
           MGTEILRPQDCL  RI VP  AFCRRR SYGN DSN+ N YN RSNRKS ARS+R   PE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNL 120
           QRKRFV N SEPSVSKRSSS+D K   NSLVME VTILRRGESLDSK K EALKKE DN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQV 180
           VVCGT+RLGPAPE V KQIRIVDVRCPI GKADVYAGSAFSMSPSPSSLPLPSFSKKK V
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 196
           STIVDDSATRDLRRLLRLDA
Sbjct: 181 STIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL
Match: A0A6J1CCP9 (uncharacterized protein LOC111009532 OS=Momordica charantia OX=3673 GN=LOC111009532 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 9.29e-100
Identity = 168/199 (84.42%), Postives = 174/199 (87.44%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSN-VYNYNSRSNRKSAA--RSDRPEQ 60
           MGTEILRPQDCL  RI VP  A CRRR SYGNSDS+ VY+YN RSNRKSAA  R +RPEQ
Sbjct: 1   MGTEILRPQDCLIERIRVPPAALCRRRSSYGNSDSSYVYSYNPRSNRKSAAAARFERPEQ 60

Query: 61  RKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLV 120
           +KRFVSN SEPSVSKRSSS+D K   NSLVME VTILRRGESLDSK K EALKKE DNLV
Sbjct: 61  KKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKFKSEALKKEGDNLV 120

Query: 121 VCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVS 180
           VCGTERLGPAPEMV KQIRIVDVRCPI   +DVYAGSAFSMSPSPSSLPLPSFSKKKQVS
Sbjct: 121 VCGTERLGPAPEMVPKQIRIVDVRCPI---SDVYAGSAFSMSPSPSSLPLPSFSKKKQVS 180

Query: 181 TIVDDSATRDLRRLLRLDA 196
           TIVDDSATRDLRRLLRLDA
Sbjct: 181 TIVDDSATRDLRRLLRLDA 196

[Close]

BLAST of Csor.00g237380 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 69/199 (34.67%), Postives = 92/199 (46.23%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60
           MGTEI+RPQ+CL  R+                 DS    +NSR N        +P+QR+R
Sbjct: 1   MGTEIIRPQNCLVDRM----------------RDSPATFFNSRRNHFHRKPPLKPDQRRR 60

Query: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120
           F              S++ +  T ++V       R+GES DS +  +  K          
Sbjct: 61  F-------------GSDEFRTTTKNIVR------RKGESFDSFSNIKVRKYS-------- 120

Query: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSA-FSMSPSPSSLPLPSFSKKKQVSTI 180
                                 P V   D+YAGS+ F++SP+PSSLPLPSFSKKK  S +
Sbjct: 121 ----------------------PEVSADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQV 134

Query: 181 V----DDSATRDLRRLLRL 195
           V    DDSA++DLRRLLRL
Sbjct: 181 VVVSIDDSASQDLRRLLRL 134

[Close]

BLAST of Csor.00g237380 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 5.2e-09
Identity = 62/201 (30.85%), Postives = 90/201 (44.78%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIG------VPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDR 60
           MG  +L PQDCLK           P     R++ +  N+ +      S+S+R S+     
Sbjct: 1   MGVAVLNPQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAP 60

Query: 61  PEQRKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEAD 120
           P    R   +   P  + + S       +N++ +  V IL+RGE +  +T    L  E  
Sbjct: 61  PLPPPRAAVSAFVPKGTLKKS------LSNTVAVSQVRILKRGEEIPKETSD--LVVEMS 120

Query: 121 NLVVCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKK 180
           +L    T R+GP P ++  QIR+   +      A  YAG     SP PS +PLP+F  KK
Sbjct: 121 DL--GSTRRIGPDPGLIPGQIRLSGRKSK---SAPFYAGPVTMTSPPPSDVPLPAFFTKK 179

Query: 181 QVSTIVDDSATRDLRRLLRLD 196
                    AT DL R+LRLD
Sbjct: 181 ---------ATNDLIRILRLD 179

[Close]

BLAST of Csor.00g237380 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 44/146 (30.14%), Postives = 71/146 (48.63%), Query Frame = 0


Query: 39  NYNSRSNRKSAARSDRPEQRKRFVSNQSEPSVSKRSSSE--DSKIRTNSLVMENVTILRR 98
           +Y+S+++R           + R   N S     ++ S     S     +LVME V IL+R
Sbjct: 6   SYSSQNHRFEHQTLIHRNPKPRLCRNSSTAPRRRKQSPTVVKSPAANPNLVMEQVKILKR 65

Query: 99  GESLDS-----------KTKGEALKKEAD-NLVVCGTERLGPAPEMVLKQIRIVDVRCPI 158
           GE+L +            T+   LK   D +L+V  T R+GP PE+++KQI  + ++   
Sbjct: 66  GETLSAFNKNKENISSDDTRRPVLKMIKDVDLIVSATNRIGPEPEILMKQIGALGLQS-- 125

Query: 159 VGKADVYAGSAFSMSPSPSSLPLPSF 171
                 +AG+  S+SP PS +P+P F
Sbjct: 126 ------FAGANCSLSPPPSCVPIPCF 143

[Close]

BLAST of Csor.00g237380 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 42/141 (29.79%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 55  PEQRKRFVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEAD 114
           P + K+ ++N+   S S   S       +      +V IL+RGE ++ K   E    +++
Sbjct: 23  PLRHKKPITNRRRRSPSSHQSQISHPPPSPHNHTNHVRILKRGEDINVKIPIEKPDLKSN 82

Query: 115 NLVVCGTERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKK 174
                   ++G  P  +   IRI + +      A  YAG   S SP PS +PLP+F   K
Sbjct: 83  -------RQIGSDPMKISTPIRISNRKSM---PALFYAGPVTSTSPPPSEVPLPAFFANK 142

Query: 175 QVSTIVDDSATRDLRRLLRLD 196
            V+      AT DL ++LRLD
Sbjct: 143 TVAGFKPTDATNDLIKILRLD 153

The following BLAST results are available for this feature:

BLAST of Csor.00g237380 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g237380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593932.1	7.45e-129	100.00	hypothetical protein SDJN03_13408, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930480.1	1.02e-126	98.98	uncharacterized protein LOC111436920 [Cucurbita moschata]	[more]
XP_023514741.1	6.85e-125	97.45	uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo]	[more]
XP_023000029.1	1.55e-121	95.92	uncharacterized protein LOC111494337 [Cucurbita maxima]	[more]
KAG6575030.1	9.37e-107	86.73	hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Csor.00g237380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX01	4.92e-127	98.98	uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]
A0A6J1KIS0	7.49e-122	95.92	uncharacterized protein LOC111494337 OS=Cucurbita maxima OX=3661 GN=LOC111494337...	[more]
A0A5A7SWA1	7.87e-102	83.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C7J3	7.87e-102	83.50	uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=...	[more]
A0A6J1CCP9	9.29e-100	84.42	uncharacterized protein LOC111009532 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Csor.00g237380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21570.1	1.2e-13	34.67	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G32020.1	5.2e-09	30.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	1.2e-05	30.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G25250.1	1.3e-04	29.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 151..170 e-value: 2.0E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..82
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 1..195
None	No IPR available	PANTHER	PTHR33670:SF1	OS01G0384800 PROTEIN	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g237380.m01	Csor.00g237380.m01	mRNA