Csor.00g234270 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAAAGAGGATGATTTTAAGCTACTAAAGTTTCAGGTTTTCCCCCTTTCTCTACAACCCACTTTCCACAATTCTTTGTTTTTCTTAAAAAAGTTGCCTTTTTTTTCTCTTTACTTCCTACTCCTACTACGTTCGCTAAAGGAACATTTTGTTGTGTGTGTTTGTGTTTGTGTGTGTGTGTGTGACTCTGTAAATCTCTGTTTTGAGTATTTGTTTTCTTTTTATAGACTTGTGATCTCAGAGTCAACATTTACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTTCTTCACAGGATAGAAGGTTTGTTCTTCTTTTTTCTATGTTCTTTGTAATGTAAAACAATGTTTTAAGTAGACTGCTGTTTAGTTGGATCTAGCTTGTTTGGTTACTGGGAAAGTGAGAGAAAATAAGAAACATTTCTGTTTGGTTTTGAAATTTTGTGATGAATCTTGTTTAAAACAGAGGAATTTAAGGAATCTTTTGATGAATGTATGTTGTATGAACAGGGGTTTTTCAGGTTGCTATAGGAGCAGAGGATCAGAAGGTTACAGTTTTAGGAAGTGTAGATTCTGCCACTTTGATCAATAAGCTGGTCCGAGCTGGAAAACATGCTGAGCTTTGGTCGCAGAAATCCGACACCAGCTCGAAACCAAAGAGCAACGACCATAAATCTTCTAACAAGGGACCCAAACTGACTCCACTTTACTGCCGCGATGATGACATTGATGGTTGTTTTGGTGGTGAGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTTCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAGAAGAGCGAACAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTCAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCGTGGCAACTGGTCAGTACCATCATCATCATCATCAGCAGCAGCAGCAGCAGCCATTAATGGACATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGGTATTACTACAATTACAATTGTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTATGATGAGAACACAAGCAGCAGTTGCTCAATCATGTAAGAAAGAAAGGGACAAAGATGATTGTGATGTTAAGGTTATTGGGGTGTTGTTTTTTCTTTGTATGTTTTAGGTGGGGGTTGTTTTTTTGTGTTGAAGGGCTGTTTTTCCTTTGTTTTTTGTCTTTTGGCAGTGGCAGTGGCAGTGGCAGTGTATTTTGTGGATTGTTCTTCAAAGATTATGTTTTGTGAAATTTGAAGCTGTCTCGTCGTTAGTTTTGTTGTTCCATTTCCTTTGTTTCATATTAAAACTGACTCTGTTGTCTGGTTATGAGGGGACCTGTGGAGGACCAAAAAAAGGAAAAAAAGATGTTTTTTTTTTAGGGTTTAGGGAGTGGTTGGGTTTTGAACAGATTTGATTCTTTGATGAAAAAGAACAGGGTTTGTTGATGAGTGAAATGGTATTGTCTTATGATGTTTTTTGTTTTTGAGTGATATATTGAGTTCTTCACTAACTTTATGACACTTAGTCTTGTCTCGACACTCACTTGATGGGTTGGGCACCGCTTCTGTGTCACAGCCTTGTTTGTCTACATGTGGGGTTCATAACCTATCGTTTTTATAGTACGGTTGTGACACACTCTCTTAATCAAAATATTTCCTCATCTTGACCATGTGACACATATTTCTTACCGAAGCTTTTAACAGAGGCCTTTCACTTGTTAGCAATTGTTGCACTGATTCTCCTCCTGATTTTACTGCAACTTCATTCTTCTATTTCTTTGACATCCAACATTGTGCATTTTCTCAAGTAGATACTGGTCTTGACATTTATTGTGAAATCACCTTCTCTAGACATGGGATGATGACTCAAAGAATACACGTGTTCACTTCTAGGAGCACTTGTGTGGCCTTGATTGCCTCTCTCGTGCTCACTCTACTTGTAGTACTTCTACATGCATTGCTTACCTCTTATTTGCTCACTCCTCTCTTAGAACTTCCATCTTCTTCCTTCATTGATGGATAAGACTCCACTCAAGGAGTTTGGCTTCAACCTCTAAAATTATTCAGATTTTGAGTCACAAATGCATTGCCCAATCTGACACTCATGATGTACTTATGAAATATTTAATTAACCTTTAAGTTTATTTCTTTGATTGTTATGTCCGATAGATTTTTTTTTTTATTTTTTTTATTACATATTTAACAACGCATTCAACAAATTTTATCTTCTCTTTAACATGTTGAATGTCACGCGTCTAGACAGTGTCAACTAGATCAATACTATATAACCTATCGATCTTTGAGCTTCCACTACGTTGTTGGACTGTGTCAACTAGATCAATACCATATAACCTTTGATCTTTGAGCTTCCACTACGTTTTTGGACAGTGTCAACTAGATCAATACTATATAACCTATCGATCTTTGAGCTTCCACTACGTTTTTGGACAGTGTCAACTGGATCAATCATAGAGCCAAACAATCATTGAGTTTCTACTATGTTTCTAGACAATGTCAACTCGATCAACCATGGTGCCTATTGAACCTTGCGCTTCCACTATATGTTTGGTCAACATCAACTAGATCAACCTTAAAGTCGATCAATCCTTGAGTTTCCACAGCGTTTCTAGGCAGTGTCAACTAGACCGACCCTACAGCTTACCGATCCTTGAGCTTCTACAACATTTTTGGACAGCATCAATTGGATCAACCCTGGAGCCCATCAATTCTTGAGCTTCCCACTATGCGTGTCAACTGGATGAATCCTAGAGCCTACTGATACTTGAGCTTCAACTATATTTCTAAACATCGTCAACTAGGTTAACTTAGCCTACCGATCTTTGAGCTTCTACTACATTGTGAACTAGACCAACCTAAAATATAAAGCAACAATAAAATCTTGGCCTTGAGATTATTGTGATTGGTTTTGCAGGAGAAAGAGAATCCTCCCAACCTATGCGGCAATGAGCAAGGTGGTCGTTGGCGAACTTCTTGATCTTGTAAGTGATTTTGTTCTGATGTCAGGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCCAAGAAACAATCATTGGATATTGA ATGACCAAAGAGGATGATTTTAAGCTACTAAAGTTTCAGACTTGTGATCTCAGAGTCAACATTTACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTTCTTCACAGGATAGAAGGGGTTTTTCAGGTTGCTATAGGAGCAGAGGATCAGAAGGTTACAGTTTTAGGAAGTGTAGATTCTGCCACTTTGATCAATAAGCTGGTCCGAGCTGGAAAACATGCTGAGCTTTGGTCGCAGAAATCCGACACCAGCTCGAAACCAAAGAGCAACGACCATAAATCTTCTAACAAGGGACCCAAACTGACTCCACTTTACTGCCGCGATGATGACATTGATGGTTGTTTTGGTGGTGAGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTTCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAGAAGAGCGAACAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTCAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCGTGGCAACTGGTCAGTACCATCATCATCATCATCAGCAGCAGCAGCAGCAGCCATTAATGGACATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGGTATTACTACAATTACAATTGTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTATGATGAGAACACAAGCAGCAGTTGCTCAATCATGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCCAAGAAACAATCATTGGATATTGA ATGACCAAAGAGGATGATTTTAAGCTACTAAAGTTTCAGACTTGTGATCTCAGAGTCAACATTTACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTTCTTCACAGGATAGAAGGGGTTTTTCAGGTTGCTATAGGAGCAGAGGATCAGAAGGTTACAGTTTTAGGAAGTGTAGATTCTGCCACTTTGATCAATAAGCTGGTCCGAGCTGGAAAACATGCTGAGCTTTGGTCGCAGAAATCCGACACCAGCTCGAAACCAAAGAGCAACGACCATAAATCTTCTAACAAGGGACCCAAACTGACTCCACTTTACTGCCGCGATGATGACATTGATGGTTGTTTTGGTGGTGAGGAAGGAGCGTTTCAGTTCAGGGCAGCTAATCTTGATCTTCACAGGCAGCGAGCGACTCCCAGGAAGCCAATAGGCCCAGGTCAGGCAGTTGCCAGAAAGAACATCCCCTCTAGGATGGACCAGAAAACCTTGGAACCTCTGAACATGAACATTCCTCAACCGTTTGGCATGGGCAGAGGAAGTATCAATCCCGGGGAGCCGAGAAGAGCGAACAACAATGACCTGAATTCAATGATGAACATGGCGGGATTCAACGGCGGCAACCATTTAAATTTTGCCACACCTTCTTCAATTGGTGTCAATTCAACAAACACCTCTCAAGGAGGATACTTCAGCTACCAGCCATCTTCAACCTCTGGATTCCCCGTGGCAACTGGTCAGTACCATCATCATCATCATCAGCAGCAGCAGCAGCAGCCATTAATGGACATGAACATGAACATGAACAACATGGTAAACAGGCAGGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAATACAGGGTATTACTACAATTACAATTGTAGCCCTGTTTATCCAAGTTATCCTTGTGCAGAGGATGGTCATTACTACCATGGACAAAGTAGTAACTCTGCAGCTGACATGTTCTATGATGAGAACACAAGCAGCAGTTGCTCAATCATGCAGATCCATAGCTGCCTCCGGAAACGTCATGAAAAAGGATTGCACCGATCTCATTCGTTGGATTGCGCTTCTGATTCATCTGATTTTGAAAGAGCATTCCAGAAGACCAGACTTTTCCAAGAAACAATCATTGGATATTGA MTKEDDFKLLKFQTCDLRVNIYCDGCKQKVKKLLHRIEGVFQVAIGAEDQKVTVLGSVDSATLINKLVRAGKHAELWSQKSDTSSKPKSNDHKSSNKGPKLTPLYCRDDDIDGCFGGEEGAFQFRAANLDLHRQRATPRKPIGPGQAVARKNIPSRMDQKTLEPLNMNIPQPFGMGRGSINPGEPRRANNNDLNSMMNMAGFNGGNHLNFATPSSIGVNSTNTSQGGYFSYQPSSTSGFPVATGQYHHHHHQQQQQQPLMDMNMNMNNMVNRQAMNQQPQMMYNRAQLVPPNTGYYYNYNCSPVYPSYPCAEDGHYYHGQSSNSAADMFYDENTSSSCSIMQIHSCLRKRHEKGLHRSHSLDCASDSSDFERAFQKTRLFQETIIGY Homology
BLAST of Csor.00g234270 vs. ExPASy Swiss-Prot
Match: A2RVM8 (Heavy metal-associated isoprenylated plant protein 37 OS=Arabidopsis thaliana OX=3702 GN=HIPP37 PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.9e-40 Identity = 145/377 (38.46%), Postives = 187/377 (49.60%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-19 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.8e-19 Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy Swiss-Prot
Match: Q9C7J6 (Heavy metal-associated isoprenylated plant protein 35 OS=Arabidopsis thaliana OX=3702 GN=HIPP35 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.6e-14 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 0
BLAST of Csor.00g234270 vs. NCBI nr
Match: KAG6601839.1 (Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 783 bits (2022), Expect = 7.47e-286 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
BLAST of Csor.00g234270 vs. NCBI nr
Match: XP_022953864.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita moschata]) HSP 1 Score: 669 bits (1727), Expect = 1.31e-241 Identity = 335/343 (97.67%), Postives = 336/343 (97.96%), Query Frame = 0
BLAST of Csor.00g234270 vs. NCBI nr
Match: KAG7032547.1 (Heavy metal-associated isoprenylated plant protein 37, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 666 bits (1718), Expect = 2.74e-240 Identity = 329/335 (98.21%), Postives = 331/335 (98.81%), Query Frame = 0
BLAST of Csor.00g234270 vs. NCBI nr
Match: XP_023520932.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 661 bits (1705), Expect = 2.53e-238 Identity = 330/341 (96.77%), Postives = 334/341 (97.95%), Query Frame = 0
BLAST of Csor.00g234270 vs. NCBI nr
Match: XP_022989984.1 (heavy metal-associated isoprenylated plant protein 37 [Cucurbita maxima]) HSP 1 Score: 650 bits (1678), Expect = 3.41e-234 Identity = 325/341 (95.31%), Postives = 330/341 (96.77%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy TrEMBL
Match: A0A6J1GR35 (heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita moschata OX=3662 GN=LOC111456271 PE=4 SV=1) HSP 1 Score: 669 bits (1727), Expect = 6.32e-242 Identity = 335/343 (97.67%), Postives = 336/343 (97.96%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy TrEMBL
Match: A0A6J1JQU9 (heavy metal-associated isoprenylated plant protein 37 OS=Cucurbita maxima OX=3661 GN=LOC111487013 PE=4 SV=1) HSP 1 Score: 650 bits (1678), Expect = 1.65e-234 Identity = 325/341 (95.31%), Postives = 330/341 (96.77%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy TrEMBL
Match: A0A1S3CSU7 (putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo OX=3656 GN=LOC103504571 PE=4 SV=1) HSP 1 Score: 402 bits (1033), Expect = 1.24e-135 Identity = 247/404 (61.14%), Postives = 272/404 (67.33%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy TrEMBL
Match: A0A0A0KRM8 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G571520 PE=4 SV=1) HSP 1 Score: 399 bits (1024), Expect = 2.86e-134 Identity = 245/404 (60.64%), Postives = 271/404 (67.08%), Query Frame = 0
BLAST of Csor.00g234270 vs. ExPASy TrEMBL
Match: A0A5D3E327 (Putative mediator of RNA polymerase II transcription subunit 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00190 PE=4 SV=1) HSP 1 Score: 367 bits (941), Expect = 1.38e-121 Identity = 239/419 (57.04%), Postives = 264/419 (63.01%), Query Frame = 0
BLAST of Csor.00g234270 vs. TAIR 10
Match: AT1G23000.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 166.8 bits (421), Expect = 3.5e-41 Identity = 145/377 (38.46%), Postives = 187/377 (49.60%), Query Frame = 0
BLAST of Csor.00g234270 vs. TAIR 10
Match: AT3G06130.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Csor.00g234270 vs. TAIR 10
Match: AT3G06130.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Csor.00g234270 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 2.0e-20 Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of Csor.00g234270 vs. TAIR 10
Match: AT5G19090.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 2.0e-20 Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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