Csor.00g231240 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGACCTCAATCTCATGACCAAGCGCGGCAAACTCGCCGGCAAAGCCATCAGCAACCTCATGTTCCACCACCACTACCACGCCGCCGCCGCCGCCGCCTCCCCTTCCTCCTCCTCTCCTCCTACCTCCGCTGGTCAACTCCCCTTCCCTATCGGCGCCGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCCTTCCCTACCTTCCACGTCGGCAAGCGCCGTCGTAACCAAAACCACAATTCCTTCTTCGCGTGTGCTCACGCGCCTGACACACTCGACGATGACGCAGCTGCAGTTAATGCCGTTAATGCCGTTGTCGAGATTCTGAATAACCACACCGGCGCGTCCTCGACACCACCAATCCCAGCCTCCCCTGCTCTCCCCGGATTTGGCCCGACTCCCAGGAGAGTCCGTCAGCTTAGGATAACCGACTCGCCCTTTCCTCTACAAGACGCTAACGCCGATCCGTTAGTTGACAAAGCGGCCGATGAATTCATCAGCAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACCGCCGACGAGAACTGA ATGCTCGACCTCAATCTCATGACCAAGCGCGGCAAACTCGCCGGCAAAGCCATCAGCAACCTCATGTTCCACCACCACTACCACGCCGCCGCCGCCGCCGCCTCCCCTTCCTCCTCCTCTCCTCCTACCTCCGCTGGTCAACTCCCCTTCCCTATCGGCGCCGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCCTTCCCTACCTTCCACGTCGGCAAGCGCCGTCGTAACCAAAACCACAATTCCTTCTTCGCGTGTGCTCACGCGCCTGACACACTCGACGATGACGCAGCTGCAGTTAATGCCGTTAATGCCGTTGTCGAGATTCTGAATAACCACACCGGCGCGTCCTCGACACCACCAATCCCAGCCTCCCCTGCTCTCCCCGGATTTGGCCCGACTCCCAGGAGAGTCCGTCAGCTTAGGATAACCGACTCGCCCTTTCCTCTACAAGACGCTAACGCCGATCCGTTAGTTGACAAAGCGGCCGATGAATTCATCAGCAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACCGCCGACGAGAACTGA ATGCTCGACCTCAATCTCATGACCAAGCGCGGCAAACTCGCCGGCAAAGCCATCAGCAACCTCATGTTCCACCACCACTACCACGCCGCCGCCGCCGCCGCCTCCCCTTCCTCCTCCTCTCCTCCTACCTCCGCTGGTCAACTCCCCTTCCCTATCGGCGCCGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCCTTCCCTACCTTCCACGTCGGCAAGCGCCGTCGTAACCAAAACCACAATTCCTTCTTCGCGTGTGCTCACGCGCCTGACACACTCGACGATGACGCAGCTGCAGTTAATGCCGTTAATGCCGTTGTCGAGATTCTGAATAACCACACCGGCGCGTCCTCGACACCACCAATCCCAGCCTCCCCTGCTCTCCCCGGATTTGGCCCGACTCCCAGGAGAGTCCGTCAGCTTAGGATAACCGACTCGCCCTTTCCTCTACAAGACGCTAACGCCGATCCGTTAGTTGACAAAGCGGCCGATGAATTCATCAGCAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACCGCCGACGAGAACTGA MLDLNLMTKRGKLAGKAISNLMFHHHYHAAAAAASPSSSSPPTSAGQLPFPIGADEYEFSCSNSPAFPTFHVGKRRRNQNHNSFFACAHAPDTLDDDAAAVNAVNAVVEILNNHTGASSTPPIPASPALPGFGPTPRRVRQLRITDSPFPLQDANADPLVDKAADEFISRFYKELRLQKTADEN Homology
BLAST of Csor.00g231240 vs. NCBI nr
Match: KAG6593486.1 (hypothetical protein SDJN03_12962, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367 bits (941), Expect = 7.03e-128 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Csor.00g231240 vs. NCBI nr
Match: XP_023514516.1 (uncharacterized protein LOC111778773 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352 bits (903), Expect = 1.02e-121 Identity = 179/184 (97.28%), Postives = 179/184 (97.28%), Query Frame = 0
BLAST of Csor.00g231240 vs. NCBI nr
Match: XP_022964083.1 (uncharacterized protein LOC111464220 [Cucurbita moschata]) HSP 1 Score: 351 bits (901), Expect = 1.92e-121 Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0
BLAST of Csor.00g231240 vs. NCBI nr
Match: XP_023000392.1 (uncharacterized protein LOC111494650 [Cucurbita maxima]) HSP 1 Score: 340 bits (872), Expect = 6.47e-117 Identity = 176/185 (95.14%), Postives = 178/185 (96.22%), Query Frame = 0
BLAST of Csor.00g231240 vs. NCBI nr
Match: KAG7025832.1 (hypothetical protein SDJN02_12330, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 298 bits (764), Expect = 5.48e-101 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Csor.00g231240 vs. ExPASy TrEMBL
Match: A0A6J1HJS6 (uncharacterized protein LOC111464220 OS=Cucurbita moschata OX=3662 GN=LOC111464220 PE=4 SV=1) HSP 1 Score: 351 bits (901), Expect = 9.31e-122 Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0
BLAST of Csor.00g231240 vs. ExPASy TrEMBL
Match: A0A6J1KDI8 (uncharacterized protein LOC111494650 OS=Cucurbita maxima OX=3661 GN=LOC111494650 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 3.13e-117 Identity = 176/185 (95.14%), Postives = 178/185 (96.22%), Query Frame = 0
BLAST of Csor.00g231240 vs. ExPASy TrEMBL
Match: A0A6J1GPL9 (uncharacterized protein LOC111456334 OS=Cucurbita moschata OX=3662 GN=LOC111456334 PE=4 SV=1) HSP 1 Score: 226 bits (576), Expect = 2.31e-72 Identity = 125/188 (66.49%), Postives = 139/188 (73.94%), Query Frame = 0
BLAST of Csor.00g231240 vs. ExPASy TrEMBL
Match: A0A6J1JMV1 (uncharacterized protein LOC111488328 OS=Cucurbita maxima OX=3661 GN=LOC111488328 PE=4 SV=1) HSP 1 Score: 220 bits (560), Expect = 5.48e-70 Identity = 122/187 (65.24%), Postives = 135/187 (72.19%), Query Frame = 0
BLAST of Csor.00g231240 vs. ExPASy TrEMBL
Match: A0A1S4E3M3 (actin-related protein 8-like OS=Cucumis melo OX=3656 GN=LOC103500787 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 1.21e-64 Identity = 117/185 (63.24%), Postives = 132/185 (71.35%), Query Frame = 0
BLAST of Csor.00g231240 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 7.5e-26 Identity = 80/188 (42.55%), Postives = 104/188 (55.32%), Query Frame = 0
BLAST of Csor.00g231240 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25 Identity = 78/194 (40.21%), Postives = 103/194 (53.09%), Query Frame = 0
BLAST of Csor.00g231240 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 6.8e-11 Identity = 66/186 (35.48%), Postives = 87/186 (46.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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