Csor.00g230100 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g230100
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc-regulated protein 8-like
Location	Csor_Chr20: 3578745 .. 3579107 (-)
RNA-Seq Expression	Csor.00g230100
Synteny	Csor.00g230100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCCCTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTCATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA

mRNA sequence

ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCCCTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTCATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA

Coding sequence (CDS)

ATGGAAGAATCCTCTCCCACTTTCCTCTCCTCCGATCGACTTCTCAGCTCATCGGAATTAGAATTTTCCGACATCGAAATGACCCCTCTTCAATCCTACACCAGCCTCAAGGACCTCCTGCCGGACACCCCCTCGCCGCCTCCCTCCGCCGCCTACCCTCTCCAATGCCCCGCCTGGGACGAACTCCCCATCAAAAACCCCCTCGTCAAACACGCCGCCTTGGCCTACCTGCAGCCGATGCTCACCCCGCCAGCCGCCGGCGATCGTAGCTTCATGCGTAGACTCAAGAAGCACGGATTCGGATGCATCGAGTGGCTCGTCGCCGTCATCGGAGAACTCTCCGGTGGAGTCCGCCGGTGGTAA

Protein sequence

MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW

Homology

[Close]

BLAST of Csor.00g230100 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (621), Expect = 3.61e-81
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWD 60
           MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWD
Sbjct: 1   MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWD 60

Query: 61  ELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW 120
           ELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW
Sbjct: 61  ELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGELSGGVRRW 120

[Close]

BLAST of Csor.00g230100 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba])

HSP 1 Score: 105 bits (261), Expect = 1.42e-25
Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 5   SPTFLSSDRLLSSSELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDEL 64
           SPTFL  D  L S E + SDIEM  +QS  YTSLKDLLP  PSPPP+   P    +W E+
Sbjct: 27  SPTFLFHDGGLDSPEFKVSDIEMITIQSLTYTSLKDLLP--PSPPPAIMSPTHNSSWHEI 86

Query: 65  PIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKH--------GFGCIEWLVAVI 110
           PI+NPLVKHAALAYLQPM TP  A D+    +LK          GFGC  WL  V+
Sbjct: 87  PIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

[Close]

BLAST of Csor.00g230100 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica])

HSP 1 Score: 101 bits (252), Expect = 1.96e-24
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 19  ELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAY 78
           E+E SDIEM  +Q+  YTSLKDLLP +P   P+   P Q  +W E+PIKNPLVKHAALAY
Sbjct: 32  EIEISDIEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSSWHEIPIKNPLVKHAALAY 91

Query: 79  LQPMLTPPAAGDRSFMRRLKK-------HGFGCIEWLVAVI----GELSGGVRR 119
           LQPM TPP  GD+  +R L++       +G GC  WL  V+     ++ GGV R
Sbjct: 92  LQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVVLSGVRDVFGGVCR 142

[Close]

BLAST of Csor.00g230100 vs. NCBI nr
Match: XP_034228819.1 (uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_1g112960 [Prunus dulcis])

HSP 1 Score: 101 bits (251), Expect = 2.78e-24
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 19  ELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAY 78
           E+E SDIEM  +Q+  YTSLKDLLP +P   P+   P Q  +W E+PIKNPLVKHAALAY
Sbjct: 32  EIEISDIEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSSWHEIPIKNPLVKHAALAY 91

Query: 79  LQPMLTPPAAGDRSFMRRLKK-------HGFGCIEWLVAVI----GELSGGVRR 119
           LQPM TPP  GD+  +R L++       +G GC  WL  V+     ++ GGV R
Sbjct: 92  LQPMSTPPEVGDKGLLRMLREKCLCEGANGVGCFAWLGDVVLSGVRDVFGGVCR 142

[Close]

BLAST of Csor.00g230100 vs. NCBI nr
Match: XP_030523234.1 (uncharacterized protein LOC115735926 [Rhodamnia argentea])

HSP 1 Score: 100 bits (249), Expect = 4.39e-24
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 7   TFLSSDRLLSSSELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPI 66
           TFL  +   ++++LE SDIEM   QS  YTSL+DLLP +P P PSAA P    +W E+PI
Sbjct: 18  TFLHHNGFATAAQLEISDIEMIAFQSVTYTSLRDLLPSSP-PLPSAASPTTNSSWYEIPI 77

Query: 67  KNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGEL 113
           KNPLVKHAALAYLQPM +PP  GD+  + +LK    GC  WL  ++  +
Sbjct: 78  KNPLVKHAALAYLQPMSSPPEVGDKGLLGKLK-DSCGCFCWLGDILSRV 124

[Close]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 3.45e-45
Identity = 83/111 (74.77%), Postives = 91/111 (81.98%), Query Frame = 0


Query: 5   SPT-FLSSDRLLSSSELEFSD-IEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWDEL 64
           SPT FLS +  LSS ELEFSD IEMTPLQSYTSLKDLLPD+PSPPPSA      PA+D+L
Sbjct: 12  SPTSFLSPNHPLSSPELEFSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT----SPAFDQL 71

Query: 65  PIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVIGEL 113
           PIKNPLVKHAALAYLQPMLTPP     +F+R LKKHGFGCIEWL AV+ E+
Sbjct: 72  PIKNPLVKHAALAYLQPMLTPPTTSHPTFLRILKKHGFGCIEWLAAVVHEV 118

[Close]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 6.86e-26
Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 5   SPTFLSSDRLLSSSELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDEL 64
           SPTFL  D  L S E + SDIEM  +QS  YTSLKDLLP  PSPPP+   P    +W E+
Sbjct: 27  SPTFLFHDGGLDSPEFKVSDIEMITIQSLTYTSLKDLLP--PSPPPAIMSPTHNSSWHEI 86

Query: 65  PIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKH--------GFGCIEWLVAVI 110
           PI+NPLVKHAALAYLQPM TP  A D+    +LK          GFGC  WL  V+
Sbjct: 87  PIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVV 140

[Close]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL
Match: M5VHF3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032mg PE=4 SV=1)

HSP 1 Score: 101 bits (252), Expect = 8.12e-25
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 19  ELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAY 78
           E+E SDIEM  +Q+  YTSLKDLLP +P   P+   P Q  +W E+PIKNPLVKHAALAY
Sbjct: 32  EIEISDIEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSSWHEIPIKNPLVKHAALAY 91

Query: 79  LQPMLTPPAAGDRSFMRRLKK-------HGFGCIEWLVAVI----GELSGGVRR 119
           LQPM TPP  GD+  +R L++       +G GC  WL  V+     ++ GGV R
Sbjct: 92  LQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVVLSGVRDVFGGVCR 142

[Close]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL
Match: A0A251MZ17 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1)

HSP 1 Score: 101 bits (252), Expect = 9.51e-25
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 19  ELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAY 78
           E+E SDIEM  +Q+  YTSLKDLLP +P   P+   P Q  +W E+PIKNPLVKHAALAY
Sbjct: 32  EIEISDIEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSSWHEIPIKNPLVKHAALAY 91

Query: 79  LQPMLTPPAAGDRSFMRRLKK-------HGFGCIEWLVAVI----GELSGGVRR 119
           LQPM TPP  GD+  +R L++       +G GC  WL  V+     ++ GGV R
Sbjct: 92  LQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVVLSGVRDVFGGVCR 142

[Close]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL
Match: A0A5E4EIX6 (PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 1.35e-24
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 19  ELEFSDIEMTPLQS--YTSLKDLLPDTPSPPPSAAYPLQCPAWDELPIKNPLVKHAALAY 78
           E+E SDIEM  +Q+  YTSLKDLLP +P   P+   P Q  +W E+PIKNPLVKHAALAY
Sbjct: 32  EIEISDIEMITIQTVTYTSLKDLLPASP---PTIMSPTQNSSWHEIPIKNPLVKHAALAY 91

Query: 79  LQPMLTPPAAGDRSFMRRLKK-------HGFGCIEWLVAVI----GELSGGVRR 119
           LQPM TPP  GD+  +R L++       +G GC  WL  V+     ++ GGV R
Sbjct: 92  LQPMSTPPEVGDKGLLRMLREKCLCEGANGVGCFAWLGDVVLSGVRDVFGGVCR 142

[Close]

BLAST of Csor.00g230100 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 29  PLQSYTSLKDLLPDTPSPPPSAAYPL---QCPAWDELPIKNPLVKHAALAYLQPMLTPPA 88
           PL  YTSLKD+LP + +   S A         +   + I+N LVK AA +YLQP  TP  
Sbjct: 37  PLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQAACSYLQPS-TPTP 96

Query: 89  AGDRSFMRRL 96
           + + SF+RR+
Sbjct: 97  SSNPSFLRRV 105

The following BLAST results are available for this feature:

BLAST of Csor.00g230100 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g230100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571006.1	3.61e-81	100.00	hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_015893260.1	1.42e-25	54.31	zinc-regulated protein 8-like [Ziziphus jujuba]	[more]
XP_007199228.2	1.96e-24	50.88	uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical pr...	[more]
XP_034228819.1	2.78e-24	50.88	uncharacterized protein LOC117637881 [Prunus dulcis] >VVA15725.1 PREDICTED: MTR_...	[more]
XP_030523234.1	4.39e-24	52.29	uncharacterized protein LOC115735926 [Rhodamnia argentea]	[more]

BLAST of Csor.00g230100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPR9	3.45e-45	74.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1	[more]
A0A6P4ADJ4	6.86e-26	54.31	zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 ...	[more]
M5VHF3	8.12e-25	50.88	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022032m...	[more]
A0A251MZ17	9.51e-25	50.88	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G169400 PE=4 SV=1	[more]
A0A5E4EIX6	1.35e-24	50.88	PREDICTED: MTR_1g112960 OS=Prunus dulcis OX=3755 GN=ALMOND_2B029195 PE=4 SV=1	[more]

BLAST of Csor.00g230100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52520.1	4.8e-05	41.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 17..110
None	No IPR available	PANTHER	PTHR34569:SF12	SUBFAMILY NOT NAMED	coord: 17..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g230100.m01	Csor.00g230100.m01	mRNA