Csor.00g229780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g229780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Signal sequence receptor subunit alpha
Location	Csor_Chr20: 3777473 .. 3781252 (-)
RNA-Seq Expression	Csor.00g229780
Synteny	Csor.00g229780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGGTTTTGCTTCCTCAATTCTGTATCTAGATTTCTTCTTGCATCTGCATGTGTTAAACTGTTGCCTCTAGCTTTAATCGAATTTCGCTCTCGCTTTCACGGTTACGGTTTCAATGTTCCATTTATTGAAATCCGGTTCAATATGCATTTCTCTCTTTCTCTATTATTGCGTTTGGTGATAGAGCTGCGCCGATTTTCGGTTGGATCTTGTGCGTGTTAGATTTGCTAATTTCCAGCTATAATCTTCCCGGTAATTTTTTTTTTCAATATTTATATGCTGTTCGATAGCCTCTGTGGCTCTTCGACTCGGTTTATACTTGATTGGAAGATGCACGAAATTGCTTGGGCAGCGTTTTTAGCGTATCCATATCAATTGTATTAATTAAGCTCGATATTTGGGTTAGTTAAGCGGACTCTGATCCACGTGATTCGAACGTTTTCATTGTGGTTAAAAGCTGGCTTTTGGTCGTTCTTCAGTTGAAGTTGTTATTCATCTTCCACGATGTGATGAATCTGTATACTTTGCTTCTTCTATTTATATATATAAATATATAAATATTTCGTTTTTTTCTTCTTCTTAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTAGTGAGTATTCCATCTAAGTTGAACAGAAATATATTCTTTTTGATATGATGCAAATAGTGAATTAAATTATAATTTCTCCAAATGCAGTCGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGTAATTAACCCTTACCTGTCACCTACAAGAGCTGTATTGTCGTTATTTGTATATAATCTGCATCAGATGGCAATTCAATAATTCACAGCCTTAAGTGGTTTTATTGTAGCGAAAATTCACCGGTAATGCACGATTTCCAGTTTGTGTTTCTTACTGTTCTTCCAATTTGTGCATTGTTAAACTTTTTTTCTCTCTGTTTTCTATGTTCTACCTTTTTCGTAAGAACTTTTTGTTTGTAATTTTGTGGGTTACTAAGATTTGGGTGCGAAAAAAGCATTGAGGTGGCCCTCATCGATACCTCAAACTGCAATTTGAAAATTTTCTTTAATGTTTTCCTTCACGTAGTCTCAGTGATGGAGTTTCCTGCTGTTATCCTTTTTTTTCTTTTTTAATTGCTGCTAGTTGTCTGCTGTGCTTCTTATTTTGTTTTTTTCCCCTTTTTTGGTGAAAAAACAGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGTATGTGACTGATAGTTAATGTGTACAAGTTTTTTTTTCATCAATTCACTGCATAACCTTTATTTGGTTGCCATATGCAAGCATAATTTTGTGCCAAGAACATTCCAGAATGTTTACTCACCTGGTTCAAGTATTCATGTTGTAGCAATCATTTACCTATTTTGTATATTTGGGGGATGAATTCTTGATTCAGTTAAAGCTGTGAGATATGAGCTAAATTTCTGAAAGCAGCTCATCTTAGATCTTGGACGTTGGTGCCTGCTTTAGCTTATTACTATTGGAGTCCGTAATCTAAATCACCTTGCTTGAGCTCAGACGCCTAGGAGTAGATGGTGTTGCTGTTTGACCTATTAGAATTTAACATACATTTACAGTAATCAGCCGTTGCATAAACTCTATACAAAAAACAGCTACCAAATAAATTAAAAATAAATGTACGTCTAAGGCCAAGGAAAGTGAATCCTAGCCACCAAAAGACTAAAATAACTATTATAATTACTAAACTTATGTATAGCAGGCTGGTTTTAATACCAAAAGGTTTCTTATAAGAAACAATGCTGTGTTGATGTATCACATCCATATATATTTCCAATATTATATATTCTAGTCCATGAAATTTTATGTAGATTTTGGCTGCCATCCTTGGTGGTGTTAATCATTTCAAAAGTGTGATTTATTCTCACACTATATTTTTGGATTTTTCTAGGAGTTTTTTTTTGTCACCCACTTATCTTCAGTTTTTTATGCTTTAAAAAAGCAGACAAGTAATGTCTTGTTTCTCTTTTTCGAAGAATTTCTTTAGTGCCTGTATATACATATTACTTGCTACAGCGTTTTGCATCTAGTCAATTCCCTTCTGTCATTTTCTTACAATTATGTTTATGTTTTGGTTCCAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTATTTTTTTGCTGTCAGCAAATATCTTCAGGTTTTTGTGATATGATGGTCTTCTACATTGAAATTAAATTTATTGTTTTCTAGATTATTGCTCTGTTGTCTGTGTTTTTAAACTGAAAGTATAAGAATGCATAAATGGCTAAAAAGACATTGCTTCTCTTTGTACAGCCTGGAAATTTTGATCTTGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGGTACACAAGCTAAAACTGAAATTTTGGATGAATTGTTTTACTTTCAGGGAGAAAATGTTAAATATCTGTGCCATGAAGATTCATAACTATCATGCCTGTGGGTGAATTATGTTTAACGAAAAAAAAAATAATAATAATAATAAAAAAAAAATAACTATCTAATGTGTTCAGTAAATCTGCTAAATCATAGGTTGGTTTGGTAATTTCCTTGGCTCAGGGGTCGATTTCTTATAATTTTTTTTTTGTATTGTTTTAATCAATGAAATCTTTCTTAGTTTCCTATCAAAAGATAAAATAGAATAAAAATTGTATGTTTATTTTCTCACAGATACATTTTGCACAGTATGGACTTTTGTTTTGATTTGGTTTTTTAGAGAAAAAAAAATAACACTTGTACTAAATATGATTGCAAAAGTTTTCATTGGGAAAAAAAATTGTATTTGTTTCATGAAATGTACAAAGTAATTTTTGAGAAGGAACAGTGACTTTACTACAAAAGAGCATTGTCTCACACTGTTAGTTGCTTTCTTCTACAGGTAAACTGGACGTGATTCTTATACTTATGGGTTTTAATTTGTTTTAGTTCCTTGATTAATTGTAATTTTTCTTTTTTTAAAAAAAACTTATTCTTGCTGATTGGAAAATATTTTTGCAATTTAGTTGGGTATTGAATTTTTTTGGTGATGCATTTAACTTCCCGCATATATCCTTGAACCCCCCAATCAATCTTATAATACTTTTTATTTTATTTTATTAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGTAAGTTCATTGACCTGTAATTAAATTTGAAGTAGTTTGGTTTCGCCCCCCTTGCTGACTTTGACTGATATTAATCTTATCTTTGGTAATACAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAG

mRNA sequence

ATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATCGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTATTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGAAATTTTGATCTTGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAG

Coding sequence (CDS)

ATGGCGTCGAAGGCCTTCAGGATTTTCTTTCTTGCACTCCTTCTCCTTGCGTCGCCTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGGATGTGGAATCTGGAGAGTCCGTTGAAGATGCCACTGACTTAGGGATCGTTGGGGATGAGCAAGATTTCGGCGACGCGAGCTTCAGCCCAGCTACAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATCGTGGTGGCCGGAGAAGAGACCGAACTTTTAGCAGGAATGAAGAACGATGGGGATTCTAGCTTGAATGTCATTGCAATCAAGGCCAGTGTTCATTACACTTTTGATCACCGAATACTGATTCAAAATCTTTCCGTACAGGGTTTTAACAATGCATCGGTACAAGCATCGACACAAGCAACTTTCCCGTATTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGAAATTTTGATCTTGTTGGAACCATTATTTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGAAGTTGTTGAAGCTGGTGGTTTTCTCAGCACTGAATCTGTATTCCTAGTTACCCTTGGAGCTGCACTTATCGTTCTATTTGGTTTGTGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACAAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAGGGCCTCAGATGCATCATTAGACGAATGGCTCGAGGGTACTGCATATTCTCAATCATCGTCAAACAAATCAAAGAAAAAGAAGTAG

Protein sequence

MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSPATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGTAYSQSSSNKSKKKK

Homology

[Close]

BLAST of Csor.00g229780 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-79
Identity = 153/254 (60.24%), Postives = 196/254 (77.17%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

Query: 187 GFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGT 246
           G LS ESVFL+TLG  L++L GLW + Q+Q L+KKTK+  KVEVGTR+++ASLDEWLEGT
Sbjct: 185 GLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 244

Query: 247 AYSQSSSNKSKKKK 258
             +++SS K+K KK
Sbjct: 245 TLAKTSSGKTKNKK 257

[Close]

BLAST of Csor.00g229780 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-18
Identity = 74/250 (29.60%), Postives = 116/250 (46.40%), Query Frame = 0


Query: 13  LLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSPATGVDTVCVFPK 72
           L+ L    L ++ C    DVE            I  DE        +P + V    +FP 
Sbjct: 4   LITLLLAVLMIISCVYSDDVE------------ITDDEV----VQATPTSDVSFSYIFPD 63

Query: 73  NSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQGFNNASVQA 132
           N  +   AG   E+L G  N+ D +LN+  I AS+++  D  + IQN + +G    +V+ 
Sbjct: 64  NQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYT-RGDFGIAVEK 123

Query: 133 STQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAGGFLSTESVF 192
              AT  Y F  S+YL+P  F L+ ++ Y+     +  TFFN TI + E       +S F
Sbjct: 124 GHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTINITEKETSFDMDSFF 183

Query: 193 LVTLGAALIVLFGLWIHG------QIQNLSKKTKRAPKVEVGTRASDASLDEWLEGTAYS 252
           L+ LG   +   G  ++G      +++ +SK  K A +VE     ++    EWL GT+ +
Sbjct: 184 LILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVE-----TEDETAEWLSGTS-A 230

Query: 253 QSSSNKSKKK 257
            SS  KS +K
Sbjct: 244 ASSKVKSVQK 230

[Close]

BLAST of Csor.00g229780 vs. NCBI nr
Match: XP_022944553.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG6571038.1 Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489 bits (1260), Expect = 4.39e-174
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Csor.00g229780 vs. NCBI nr
Match: XP_023512742.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488 bits (1256), Expect = 1.79e-173
Identity = 256/257 (99.61%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFF VSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFVVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Csor.00g229780 vs. NCBI nr
Match: XP_022987011.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima])

HSP 1 Score: 484 bits (1246), Expect = 5.97e-172
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVES +SVEDATDLGI+GDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESVKSVEDATDLGIIGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Csor.00g229780 vs. NCBI nr
Match: XP_022146235.1 (translocon-associated protein subunit alpha [Momordica charantia])

HSP 1 Score: 442 bits (1138), Expect = 1.78e-155
Identity = 233/258 (90.31%), Postives = 243/258 (94.19%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKAFRI FLALLLLASP LQVVRCQSDADVE  ++VED TDLGIVG DEQD+GD SFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHR++IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           LS QGFNNASV AS+QATFPYFF VS++LQ GNFDLVGTIIYEIDQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
           VEAGGFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT++SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNKSKKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

[Close]

BLAST of Csor.00g229780 vs. NCBI nr
Match: XP_022946984.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG7035036.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437 bits (1123), Expect = 3.44e-153
Identity = 230/258 (89.15%), Postives = 240/258 (93.02%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF ALLLLASPFLQVVRCQSDA VES E+V+D TDLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFFAVSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG AL+VL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL
Match: A0A6J1FY56 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111448970 PE=3 SV=1)

HSP 1 Score: 489 bits (1260), Expect = 2.12e-174
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL
Match: A0A6J1JCX1 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111484586 PE=3 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 2.89e-172
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASFSP 60
           MASKAFRIFFLALLLLASPFLQVVRCQSDADVES +SVEDATDLGI+GDEQDFGDASFSP
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESVKSVEDATDLGIIGDEQDFGDASFSP 60

Query: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120
           ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL
Sbjct: 61  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 120

Query: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180
           SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV
Sbjct: 121 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 180

Query: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240
           EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL
Sbjct: 181 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 240

Query: 241 EGTAYSQSSSNKSKKKK 257
           EGTAYSQSSSNKSKKKK
Sbjct: 241 EGTAYSQSSSNKSKKKK 257

[Close]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL
Match: A0A6J1CWQ9 (Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC111015499 PE=3 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 8.64e-156
Identity = 233/258 (90.31%), Postives = 243/258 (94.19%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKAFRI FLALLLLASP LQVVRCQSDADVE  ++VED TDLGIVG DEQD+GD SFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHR++IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           LS QGFNNASV AS+QATFPYFF VS++LQ GNFDLVGTIIYEIDQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
           VEAGGFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT++SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNKSKKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

[Close]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL
Match: A0A6J1G5G5 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111451000 PE=3 SV=1)

HSP 1 Score: 437 bits (1123), Expect = 1.67e-153
Identity = 230/258 (89.15%), Postives = 240/258 (93.02%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF ALLLLASPFLQVVRCQSDA VES E+V+D TDLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFFAVSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG AL+VL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL
Match: A0A6J1I4Y6 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111469918 PE=3 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 1.86e-150
Identity = 225/258 (87.21%), Postives = 237/258 (91.86%), Query Frame = 0


Query: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60
           MASKA+RIFF AL LLASPFLQVVRCQSDA VES E+V+D +DLG VG DEQDFGD SFS
Sbjct: 1   MASKAYRIFFFALFLLASPFLQVVRCQSDASVESEEAVKDISDLGTVGEDEQDFGDGSFS 60

Query: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180
           L+ Q +NNASV AS+QATFPYFFAVSKYLQPGNFD+VGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPYNNASVPASSQATFPYFFAVSKYLQPGNFDIVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240
            EA GFLS ESVFLVTLG ALIVL GLWIHGQIQNL KKTKRAPKVE GT+ASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLPKKTKRAPKVEFGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKSKKKK 257
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

[Close]

BLAST of Csor.00g229780 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 296.6 bits (758), Expect = 1.9e-80
Identity = 153/254 (60.24%), Postives = 196/254 (77.17%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

Query: 187 GFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWLEGT 246
           G LS ESVFL+TLG  L++L GLW + Q+Q L+KKTK+  KVEVGTR+++ASLDEWLEGT
Sbjct: 185 GLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 244

Query: 247 AYSQSSSNKSKKKK 258
             +++SS K+K KK
Sbjct: 245 TLAKTSSGKTKNKK 257

[Close]

BLAST of Csor.00g229780 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 258.1 bits (658), Expect = 7.7e-69
Identity = 145/257 (56.42%), Postives = 182/257 (70.82%), Query Frame = 0


Query: 5   AFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVGDEQDFGDASF----SP 64
           +FR+ F A LLL SPFL+V  CQSD++ +SG  V D      VG+E+   +  F    + 
Sbjct: 4   SFRLLFFAFLLLVSPFLKVALCQSDSE-DSGFEVSD------VGEEESDAEEVFGLELTS 63

Query: 65  ATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNL 124
           A G++T+CVFPKNSA+I+ AG ETELL GMKNDG S+++++A+K S+H  FD    +QNL
Sbjct: 64  APGIETLCVFPKNSAKIIKAGVETELLVGMKNDGQSNVDIVAVKGSLHLPFDQN-AVQNL 123

Query: 125 SVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVV 184
           +   F+NASV  S QAT PY FAVSK+LQ G FD VGTIIYEID  PYQS F+NGTIEVV
Sbjct: 124 TALSFSNASVPTSAQATLPYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVV 183

Query: 185 EAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEWL 244
           E G     ESVFL  L   +I    ++I   +++++KKTKRAPKVEVGT   DAS DEWL
Sbjct: 184 EDGPLFRMESVFLSGLLIFVIAFLAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWL 243

Query: 245 EGTAYSQSSSNKSKKKK 258
           EGT+Y+QSSS KSKKKK
Sbjct: 244 EGTSYTQSSS-KSKKKK 251

[Close]

BLAST of Csor.00g229780 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-54
Identity = 109/183 (59.56%), Postives = 138/183 (75.41%), Query Frame = 0


Query: 7   RIFFLALLLLASPFLQVVRCQSDADVESG---ESVEDATDLGIVGDEQDFGDASFSPATG 66
           R+ FLALLLLASP LQV RCQSDA+  S    + V + TD  +  D+ D  D + S   G
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTDDAVEEDDHDL-DMNLSSFPG 64

Query: 67  VDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQNLSVQ 126
           V+TVCVFPKNSA++V AGEETELL G+KN+G + + V+ I+ASVH  +DH++L+QNL++ 
Sbjct: 65  VETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTML 124

Query: 127 GFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEVVEAG 186
             NNAS+  S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEVVE+G
Sbjct: 125 RLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVESG 184

The following BLAST results are available for this feature:

BLAST of Csor.00g229780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45434	2.7e-79	60.24	Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q54R45	4.6e-18	29.60	Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689...	[more]

BLAST of Csor.00g229780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944553.1	4.39e-174	100.00	translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG657103...	[more]
XP_023512742.1	1.79e-173	99.61	translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987011.1	5.97e-172	98.83	translocon-associated protein subunit alpha-like [Cucurbita maxima]	[more]
XP_022146235.1	1.78e-155	90.31	translocon-associated protein subunit alpha [Momordica charantia]	[more]
XP_022946984.1	3.44e-153	89.15	translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG703503...	[more]

BLAST of Csor.00g229780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY56	2.12e-174	100.00	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JCX1	2.89e-172	98.83	Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114845...	[more]
A0A6J1CWQ9	8.64e-156	90.31	Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G5G5	1.67e-153	89.15	Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I4Y6	1.86e-150	87.21	Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114699...	[more]

BLAST of Csor.00g229780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21160.1	1.9e-80	60.24	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G16595.1	7.7e-69	56.42	Translocon-associated protein (TRAP), alpha subunit	[more]
AT2G21160.2	1.8e-54	59.56	Translocon-associated protein (TRAP), alpha subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005595	Translocon-associated protein (TRAP), alpha subunit	PFAM	PF03896	TRAP_alpha	coord: 29..242 e-value: 1.0E-25 score: 90.5
None	No IPR available	PANTHER	PTHR12924:SF5	SUBFAMILY NOT NAMED	coord: 5..257
None	No IPR available	PANTHER	PTHR12924	TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT	coord: 5..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g229780.m01	Csor.00g229780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane