Csor.00g229560 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTCGATTACTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAGCAGTTTGTGGTTCCGATATTTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGCGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA ATGGGGATTCGATTACTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAGCAGTTTGTGGTTCCGATATTTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGCGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA ATGGGGATTCGATTACTATCTTTGGTTCCTCATGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAGCAGTTTGTGGTTCCGATATTTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGCGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA MGIRLLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKQFVVPIFYLNQPLFQQLLRHAEEEFGFHHPQGRLTIPCKEDAFIELTSRLQAF Homology
BLAST of Csor.00g229560 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.4e-20 Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 7.0e-20 Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 9.2e-20 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Csor.00g229560 vs. NCBI nr
Match: KAG6571060.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 9.86e-66 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g229560 vs. NCBI nr
Match: XP_022944056.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata]) HSP 1 Score: 201 bits (511), Expect = 4.02e-65 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g229560 vs. NCBI nr
Match: XP_023512613.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191 bits (486), Expect = 2.63e-61 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Csor.00g229560 vs. NCBI nr
Match: XP_038900563.1 (auxin-responsive protein SAUR21-like [Benincasa hispida]) HSP 1 Score: 180 bits (457), Expect = 6.98e-57 Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of Csor.00g229560 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata]) HSP 1 Score: 179 bits (453), Expect = 2.85e-56 Identity = 85/94 (90.43%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy TrEMBL
Match: A0A6J1FTD8 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448606 PE=3 SV=1) HSP 1 Score: 201 bits (511), Expect = 1.95e-65 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1) HSP 1 Score: 179 bits (453), Expect = 1.38e-56 Identity = 85/94 (90.43%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy TrEMBL
Match: A0A6J1G7A6 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451398 PE=3 SV=1) HSP 1 Score: 179 bits (453), Expect = 1.38e-56 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1) HSP 1 Score: 177 bits (450), Expect = 3.95e-56 Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Csor.00g229560 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1) HSP 1 Score: 177 bits (450), Expect = 3.95e-56 Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Csor.00g229560 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24 Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Csor.00g229560 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.5 bits (267), Expect = 6.3e-24 Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of Csor.00g229560 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.5 bits (249), Expect = 7.7e-22 Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of Csor.00g229560 vs. TAIR 10
Match: AT3G03820.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21 Identity = 50/86 (58.14%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of Csor.00g229560 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21 Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|